Details for gene set V$PAX

Table: GSEA Results Summary

Dataset	Set_03_absentNotch_versus_truncNotch.phenotype_absentNotch_versus_truncNotch.cls #absentNotch_versus_truncNotch.phenotype_absentNotch_versus_truncNotch.cls #absentNotch_versus_truncNotch_repos
Phenotype	phenotype_absentNotch_versus_truncNotch.cls#absentNotch_versus_truncNotch_repos
Upregulated in class	truncNotch
GeneSet	V$PAX_Q6
Enrichment Score (ES)	-0.44144613
Normalized Enrichment Score (NES)	-1.2783636
Nominal p-value	0.0228385
FDR q-value	0.9416363
FWER p-Value	1.0

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	METAP1	3520632	121	4.035	0.0251	No
2	LUC7L	6040156 6110411	322	3.137	0.0389	No
3	OSBPL9	2570373	703	2.316	0.0364	No
4	STIP1	6450390	774	2.205	0.0500	No
5	BTG1	4200735 6040131 6200133	783	2.195	0.0668	No
6	PPID	2680707	914	2.022	0.0756	No
7	SLIT3	7100132	1025	1.864	0.0842	No
8	RUNX1	3840711	1043	1.837	0.0977	No
9	SOCS2	4760692	1124	1.751	0.1071	No
10	MCTS1	6130133	1148	1.732	0.1195	No
11	LDB1	5270601	1263	1.597	0.1258	No
12	BZW1	460270	1269	1.584	0.1380	No
13	MBNL1	2640762 7100048	1576	1.263	0.1313	No
14	MAP2K6	1230056 2940204	1761	1.102	0.1300	No
15	UBE2H	1980142 2970079	1882	1.024	0.1315	No
16	GATA3	6130068	1948	0.991	0.1358	No
17	MYADM	4230132	2099	0.905	0.1347	No
18	PPARGC1B	3290114	2235	0.828	0.1339	No
19	PPP1R12A	4070066 4590162	2393	0.748	0.1313	No
20	HHEX	2340575	2457	0.703	0.1334	No
21	MOSPD1	2030170 5270156 6900142	2614	0.626	0.1298	No
22	CHD2	4070039	2653	0.611	0.1326	No
23	GPR85	5130750 5910020	2823	0.530	0.1276	No
24	NEDD4	460736 1190280	3060	0.438	0.1182	No
25	DNTTIP1	5360537	3164	0.403	0.1158	No
26	AMOTL1	380279	3267	0.370	0.1131	No
27	SP6	60484 510452 2690333	3275	0.366	0.1156	No
28	SLCO3A1	1050408 2370156 6110072	3287	0.360	0.1179	No
29	BCL2L2	2760692 6770739	3496	0.296	0.1089	No
30	EN1	5360168 7050025	3547	0.281	0.1084	No
31	RNF34	3800332 4590717 5670138	3728	0.232	0.1004	No
32	LUZP1	940075 4280458 6180070	3827	0.213	0.0968	No
33	AMD1	6290128	3943	0.188	0.0920	No
34	ITGA7	1230739	4433	0.120	0.0664	No
35	HAVCR2	6860592	4465	0.116	0.0657	No
36	KCNA2	5080403	4589	0.105	0.0598	No
37	ATF3	1940546	4592	0.105	0.0605	No
38	ZIC3	380020	4656	0.100	0.0579	No
39	PTCH2	2900092	4712	0.096	0.0557	No
40	NTRK1	6400538	4783	0.091	0.0526	No
41	PFTK1	1780181	4849	0.086	0.0497	No
42	DHH	2120433	5129	0.070	0.0351	No
43	SEMA3A	1780064	5354	0.061	0.0235	No
44	KCNIP2	60088 1780324	5484	0.055	0.0169	No
45	T	6370164	5505	0.055	0.0162	No
46	OIT3	1660152	5841	0.044	-0.0016	No
47	SNCAIP	4010551	5880	0.043	-0.0033	No
48	ARHGAP12	1050181	6060	0.038	-0.0127	No
49	IRX3	4200112	6144	0.036	-0.0169	No
50	BNC1	5550427	6213	0.034	-0.0204	No
51	CHRND	840403 2260670	6257	0.033	-0.0224	No
52	GSC	1580685	6340	0.030	-0.0267	No
53	HOXD3	6450154	6348	0.030	-0.0268	No
54	SKIL	1090364	6355	0.030	-0.0269	No
55	HOXB9	2640687	6386	0.029	-0.0283	No
56	HNF4G	5720451	6615	0.025	-0.0405	No
57	MYF6	2690576	6715	0.022	-0.0457	No
58	EMX2	1660092	6718	0.022	-0.0456	No
59	UPK2	60176	6779	0.021	-0.0487	No
60	ACCN1	2060139 2190541	6786	0.021	-0.0488	No
61	TGFB3	1070041	6952	0.017	-0.0577	No
62	TEAD1	2470551	7024	0.016	-0.0614	No
63	CRYGB	2340593	7069	0.016	-0.0636	No
64	SPRY2	5860184	7168	0.014	-0.0689	No
65	GTPBP1	2230541 4560528	7235	0.012	-0.0723	No
66	P4HA2	1090546	7513	0.007	-0.0873	No
67	CHML	6650156	7613	0.005	-0.0926	No
68	CHRDL1	1580037 6380204	7866	0.001	-0.1063	No
69	CP	2570484	7882	0.001	-0.1071	No
70	TAL1	7040239	7996	-0.001	-0.1132	No
71	BMP5	4670048	8035	-0.001	-0.1153	No
72	SP7	1050315	8171	-0.004	-0.1226	No
73	BET1	4010725	8281	-0.006	-0.1284	No
74	PLAC1	2350594	8325	-0.006	-0.1307	No
75	NKX2-8	50022	8460	-0.009	-0.1379	No
76	TMPRSS5	4060068	8465	-0.009	-0.1381	No
77	HNT	6450731	8470	-0.009	-0.1382	No
78	PDHA2	2630438	8522	-0.010	-0.1409	No
79	CRLF1	3520092	8580	-0.010	-0.1439	No
80	ADRA2C	5130154	8704	-0.013	-0.1505	No
81	JAG1	3440390	8849	-0.015	-0.1582	No
82	XPR1	1500093	8871	-0.015	-0.1592	No
83	SPTBN4	4150279 5270286	8887	-0.016	-0.1599	No
84	PAX3	50551	8971	-0.017	-0.1643	No
85	CDH16	1450129	8982	-0.017	-0.1647	No
86	SFTPC	3290133	9209	-0.021	-0.1768	No
87	LMO4	3800746	9219	-0.021	-0.1771	No
88	GRIA1	1340152 3780750 4920440	9247	-0.022	-0.1784	No
89	TGFBR1	1400148 4280020 6550711	9267	-0.022	-0.1792	No
90	SRPX	580717 1980162	9313	-0.023	-0.1815	No
91	FGF14	2630390 3520075 6770048	9393	-0.024	-0.1856	No
92	PRRX1	4120193 4480390	9563	-0.028	-0.1946	No
93	PRDM1	3170347 3520301	9666	-0.030	-0.1999	No
94	GJB1	1240441	9777	-0.032	-0.2056	No
95	FOXA1	3710609	9825	-0.033	-0.2079	No
96	SLC26A7	1850398 3830377	9848	-0.033	-0.2088	No
97	BDNF	2940128 3520368	9969	-0.036	-0.2150	No
98	SPATS2	2360066	10071	-0.039	-0.2202	No
99	NRG1	1050332	10091	-0.039	-0.2209	No
100	ELP4	1230576	10132	-0.040	-0.2228	No
101	HOXA5	6840026	10312	-0.043	-0.2322	No
102	RCL1	1980408 2680008 3800176	10670	-0.051	-0.2511	No
103	TRIB1	2320435	10969	-0.058	-0.2668	No
104	MOBKL2C	2640088 3830017	11039	-0.060	-0.2701	No
105	A2M	6620039	11082	-0.061	-0.2719	No
106	RFX4	3710100 5340215	11234	-0.065	-0.2796	No
107	NRP2	4070400 5860041 6650446	11605	-0.077	-0.2990	No
108	FGF10	730458 840706	11639	-0.079	-0.3002	No
109	VWF	4670519	11758	-0.083	-0.3060	No
110	RFX5	5420128	11955	-0.091	-0.3159	No
111	OTOP2	610068	12093	-0.096	-0.3226	No
112	MUSK	1190113	12205	-0.101	-0.3278	No
113	PPARD	110131	12378	-0.111	-0.3363	No
114	SLITRK5	6590292	12444	-0.115	-0.3389	No
115	USH1G	2940446	12481	-0.116	-0.3399	No
116	B4GALT5	1230692	12700	-0.129	-0.3507	No
117	HOXC4	1940193	12761	-0.134	-0.3529	No
118	CYR61	1240408 5290026 4120452 6550008	12825	-0.138	-0.3553	No
119	BRS3	1740403	12835	-0.138	-0.3547	No
120	BRUNOL4	4490452 5080451	13175	-0.164	-0.3718	No
121	MYO18B	7100670	13215	-0.167	-0.3726	No
122	FLNC	2360048 5050270	13267	-0.171	-0.3740	No
123	CHRNA2	5050315	13590	-0.205	-0.3899	No
124	DOCK4	5910102	13805	-0.229	-0.3997	No
125	TRPM3	2470110 6400731 6550047	13949	-0.245	-0.4055	No
126	LRRK1	2810609	13990	-0.250	-0.4057	No
127	TNKS1BP1	7040184	13996	-0.250	-0.4040	No
128	TAF5	3450288 5890193 6860435	14025	-0.254	-0.4036	No
129	GNB4	3390079 4230035	14096	-0.265	-0.4053	No
130	ITGB4	1740021 3840482	14098	-0.265	-0.4033	No
131	CASKIN2	2030113	14248	-0.288	-0.4091	No
132	PHACTR3	3850435 5900445	14280	-0.294	-0.4084	No
133	SYNPO2L	5390719	14360	-0.308	-0.4103	No
134	OFCC1	2060392	14377	-0.311	-0.4087	No
135	HOXB2	6450592	14396	-0.314	-0.4072	No
136	ATP2C1	2630446 6520253	14495	-0.331	-0.4100	No
137	SFXN2	2650563 3140095 3830762 3870398	14527	-0.335	-0.4090	No
138	JMJD2B	6350372 6400471	14776	-0.387	-0.4194	No
139	PTK7	380315	14860	-0.404	-0.4208	No
140	BLVRB	7040707	14886	-0.410	-0.4189	No
141	ACTN3	3140541 6480598	14918	-0.418	-0.4173	No
142	GRAP2	7100441 1410647	15117	-0.469	-0.4244	No
143	PRG4	5860156 6650086	15433	-0.581	-0.4369	Yes
144	EGR3	6940128	15440	-0.582	-0.4326	Yes
145	WWOX	510008 870524 1090114	15454	-0.588	-0.4287	Yes
146	TNFSF10	3170300	15472	-0.594	-0.4250	Yes
147	HIRA	4480609 5270167	15491	-0.601	-0.4212	Yes
148	CHN2	870528	15664	-0.671	-0.4253	Yes
149	TPM3	670600 3170296 5670167 6650471	15740	-0.702	-0.4239	Yes
150	GATA1	6400068	15914	-0.799	-0.4270	Yes
151	LMAN2	430154	16064	-0.876	-0.4282	Yes
152	MRPL40	2370215	16192	-0.951	-0.4276	Yes
153	TWIST1	5130619	16286	-1.005	-0.4248	Yes
154	RGS3	60670 540736 1340180 1500369 3390735 4010131 4610402 6380114	16462	-1.101	-0.4256	Yes
155	ARL3	5690725	16628	-1.217	-0.4250	Yes
156	SLC1A4	5290064	16693	-1.264	-0.4186	Yes
157	LENG9	3060072	16739	-1.294	-0.4108	Yes
158	SERPING1	5550440	16795	-1.332	-0.4034	Yes
159	IER3	5860021	16843	-1.389	-0.3950	Yes
160	NFATC1	510400 2320348 4050600 6180161 6290136 6620086	16879	-1.420	-0.3858	Yes
161	CACNA2D3	4010184	16974	-1.486	-0.3792	Yes
162	TIGD3	3850576	17029	-1.511	-0.3703	Yes
163	BATF	6760390	17115	-1.569	-0.3626	Yes
164	ETV6	610524	17150	-1.594	-0.3519	Yes
165	TBCC	4810021	17300	-1.723	-0.3465	Yes
166	MRPS6	870164	17362	-1.772	-0.3359	Yes
167	UBE2C	6130017	17457	-1.873	-0.3263	Yes
168	FEZ2	5910181	17498	-1.902	-0.3135	Yes
169	THAP7	6660673	17615	-2.020	-0.3039	Yes
170	TBC1D17	1780450	17803	-2.248	-0.2964	Yes
171	MRPL27	2060131	17850	-2.304	-0.2808	Yes
172	FBXO36	1410086	17876	-2.343	-0.2638	Yes
173	WBP1	6100066	17967	-2.495	-0.2491	Yes
174	TLE3	580040 4730121	18007	-2.546	-0.2312	Yes
175	PPP1R9B	3130619	18017	-2.558	-0.2116	Yes
176	ETV5	110017	18034	-2.603	-0.1921	Yes
177	ICAM1	6980138	18039	-2.609	-0.1718	Yes
178	EGLN2	540086	18073	-2.645	-0.1528	Yes
179	PRKCH	5720079	18256	-3.044	-0.1388	Yes
180	PTPN6	4230128	18276	-3.085	-0.1156	Yes
181	BCL9L	6940053	18318	-3.207	-0.0927	Yes
182	AKT1S1	1660048	18416	-3.525	-0.0703	Yes
183	EDG5	2640300	18466	-3.760	-0.0434	Yes
184	FLOT1	1660575 1690040	18614	-6.562	0.0001	Yes