Details for gene set V$E2F

Table: GSEA Results Summary

Dataset	Set_03_absentNotch_versus_truncNotch.phenotype_absentNotch_versus_truncNotch.cls #absentNotch_versus_truncNotch.phenotype_absentNotch_versus_truncNotch.cls #absentNotch_versus_truncNotch_repos
Phenotype	phenotype_absentNotch_versus_truncNotch.cls#absentNotch_versus_truncNotch_repos
Upregulated in class	absentNotch
GeneSet	V$E2F_Q6
Enrichment Score (ES)	0.59040076
Normalized Enrichment Score (NES)	1.7373707
Nominal p-value	0.0
FDR q-value	0.006688236
FWER p-Value	0.053

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	GSPT1	5420050	18	5.469	0.0335	Yes
2	PPM1D	1690193	24	5.188	0.0660	Yes
3	SFRS1	2360440	39	4.846	0.0958	Yes
4	CTCF	5340017	61	4.586	0.1236	Yes
5	UGCGL1	4230072	63	4.528	0.1521	Yes
6	TMPO	4050494	74	4.448	0.1796	Yes
7	ZCCHC8	2260332 2350487	105	4.140	0.2041	Yes
8	EED	2320373	110	4.095	0.2298	Yes
9	CDCA7	3060097	118	4.044	0.2549	Yes
10	RBL1	3130372	151	3.829	0.2773	Yes
11	KPNB1	1690138	152	3.826	0.3015	Yes
12	BRMS1L	6110609	154	3.813	0.3255	Yes
13	PHC1	520195	171	3.750	0.3483	Yes
14	MCM4	2760673 5420711	225	3.505	0.3675	Yes
15	DCK	6900411	283	3.283	0.3851	Yes
16	SOAT1	1190019	288	3.267	0.4055	Yes
17	NASP	2260139 2940369 5130707	312	3.185	0.4244	Yes
18	PCNA	940754	337	3.090	0.4426	Yes
19	DNMT1	2260097	405	2.929	0.4574	Yes
20	POLD3	6400278	499	2.715	0.4695	Yes
21	HTF9C	3190048 4120132	583	2.513	0.4809	Yes
22	H2AFZ	1470168	673	2.360	0.4909	Yes
23	ALDH6A1	1770746	1035	1.852	0.4831	Yes
24	PRPS1	6350129	1049	1.834	0.4939	Yes
25	ACO2	4230600	1057	1.827	0.5051	Yes
26	POLE4	6860097	1103	1.773	0.5138	Yes
27	STMN1	1990717	1146	1.733	0.5225	Yes
28	CDC25A	3800184	1196	1.670	0.5304	Yes
29	NCL	2360463 4540279	1310	1.541	0.5340	Yes
30	ILF3	940722 3190647 6520110	1392	1.453	0.5388	Yes
31	HNRPA1	4670398 5050687	1396	1.449	0.5478	Yes
32	SUMO1	1990364 2760338 6380195	1458	1.382	0.5532	Yes
33	MCM6	60092 540181 6510110	1526	1.312	0.5578	Yes
34	E2F1	5360093	1556	1.284	0.5643	Yes
35	FANCD2	1850280 6840348	1699	1.150	0.5639	Yes
36	UFD1L	870020	1773	1.092	0.5668	Yes
37	SFRS7	2760408	1858	1.040	0.5689	Yes
38	AK2	4590458 4760195 6110097	1878	1.028	0.5743	Yes
39	PPP1CC	6380300 2510647	1943	0.993	0.5771	Yes
40	NOLC1	2350195	1964	0.983	0.5822	Yes
41	GMNN	2630148	1999	0.965	0.5865	Yes
42	SNRPD1	4480162	2196	0.847	0.5812	Yes
43	PHF5A	2690519	2377	0.753	0.5762	Yes
44	DNAJC11	360465 3390215	2423	0.723	0.5783	Yes
45	MYH10	2640673	2426	0.718	0.5828	Yes
46	MCM3	5570068	2610	0.627	0.5768	Yes
47	RAB11B	3990609	2644	0.614	0.5789	Yes
48	MCM7	3290292 5220056	2662	0.607	0.5818	Yes
49	USP37	2470433	2706	0.580	0.5831	Yes
50	CDC6	4570296 5360600	2713	0.578	0.5865	Yes
51	PHF15	6550066 6860673	2851	0.521	0.5823	Yes
52	CDT1	3780682	2867	0.514	0.5848	Yes
53	EZH2	6130605 6380524	2881	0.506	0.5873	Yes
54	MSH2	6180273	2927	0.488	0.5879	Yes
55	CLSPN	2190239 2630687 5550632	2938	0.483	0.5904	Yes
56	TBX6	4730139 6840647	3002	0.462	0.5899	No
57	SLC38A1	520465	3087	0.429	0.5881	No
58	SLCO3A1	1050408 2370156 6110072	3287	0.360	0.5796	No
59	E2F3	50162 460180	3320	0.350	0.5800	No
60	HIST1H2AH	3710333	3331	0.348	0.5817	No
61	WEE1	3390070	3430	0.317	0.5784	No
62	CDC45L	70537 3130114	3466	0.305	0.5784	No
63	ASXL2	130670	3506	0.294	0.5782	No
64	CORT	360008 2340092	3541	0.283	0.5781	No
65	ADAMTS2	2650025 6370133 6840670	3598	0.265	0.5767	No
66	STAG2	4540132	3638	0.254	0.5762	No
67	PPP1R8	6290292	3785	0.219	0.5697	No
68	ERBB2IP	580253 1090672	3909	0.196	0.5643	No
69	POLA2	940519	4144	0.155	0.5526	No
70	HS6ST3	5910138	4439	0.119	0.5374	No
71	HNRPD	4120021	4486	0.114	0.5356	No
72	E2F7	4200056	4524	0.111	0.5343	No
73	FHOD1	2680279	4555	0.108	0.5334	No
74	TOPBP1	6020333	4595	0.105	0.5319	No
75	SP3	3840338	5216	0.066	0.4988	No
76	KCNA6	450291 1400086 1660291 2470576	5558	0.053	0.4807	No
77	PCSK1	2350148	5571	0.053	0.4803	No
78	PRPF4B	940181 2570300	5905	0.042	0.4626	No
79	UXT	110019 5080066	5961	0.041	0.4598	No
80	JPH1	610739	6081	0.037	0.4536	No
81	GRIA4	2640131	6252	0.033	0.4446	No
82	FMO4	360735	6310	0.031	0.4417	No
83	RHD	4050168	6672	0.023	0.4223	No
84	SLC6A4	2230372	6727	0.022	0.4196	No
85	SMAD6	870504	6850	0.019	0.4131	No
86	RQCD1	1850139	7199	0.013	0.3943	No
87	STAG1	1190300 1400722 4590100	7962	-0.000	0.3530	No
88	NUP153	7000452	8186	-0.004	0.3410	No
89	FBXO5	2630551	8235	-0.005	0.3384	No
90	ARHGAP6	2060121	8632	-0.011	0.3170	No
91	CBX5	3830072 6290167	8836	-0.015	0.3061	No
92	GABRB3	4150164	8891	-0.016	0.3033	No
93	PRKDC	1400072 4230541	9467	-0.026	0.2723	No
94	TREX2	4920707	9493	-0.027	0.2712	No
95	INSM1	3450671	9698	-0.030	0.2603	No
96	PAX6	1190025	9850	-0.033	0.2523	No
97	POLE2	6110041	9924	-0.035	0.2486	No
98	EFNA5	460707 2190519	10306	-0.043	0.2282	No
99	DMD	1740041 3990332	10389	-0.045	0.2241	No
100	GPRC5B	2760114	10916	-0.057	0.1960	No
101	IPO7	2190746	10918	-0.057	0.1963	No
102	STK35	2360121	11527	-0.075	0.1638	No
103	NRP2	4070400 5860041 6650446	11605	-0.077	0.1601	No
104	PODN	3710068	11862	-0.087	0.1468	No
105	MCM2	5050139	11994	-0.092	0.1403	No
106	RAD51	6110450 6980280	12021	-0.093	0.1395	No
107	DNAJC9	6130019	12121	-0.098	0.1347	No
108	EPHB1	4610056	12404	-0.113	0.1202	No
109	MCM8	6130743	12548	-0.120	0.1132	No
110	CASP8AP2	5910593	12572	-0.121	0.1127	No
111	ARID4A	520156 1050707	12750	-0.134	0.1040	No
112	HNRPUL1	2120008 4920408 5570180 6370609 6770403	12896	-0.143	0.0970	No
113	HNRPR	2320440 2900601 4610008	13138	-0.161	0.0850	No
114	PIM1	630047	13494	-0.191	0.0670	No
115	HOXC10	5360170	13588	-0.204	0.0632	No
116	RPS6KA5	2120563 7040546	13898	-0.239	0.0480	No
117	KCND2	1170128 2100112	13984	-0.250	0.0450	No
118	SEMA5A	6200110 6520435	14008	-0.252	0.0453	No
119	RANBP1	430215 1090180	14100	-0.266	0.0421	No
120	YBX2	3520441	14163	-0.275	0.0404	No
121	IL4I1	3190161	14256	-0.291	0.0373	No
122	HCN3	3940438 6840750	14393	-0.314	0.0319	No
123	ZBTB4	6450441	14441	-0.322	0.0314	No
124	HMGN2	3140091	14503	-0.332	0.0302	No
125	CCNT1	2450563 5390184	14574	-0.345	0.0286	No
126	SEMA6A	2690138 3060021	14658	-0.359	0.0263	No
127	ING3	110438 2060390	14752	-0.380	0.0237	No
128	PVRL1	2570167 5220519 5890500 3190309	14778	-0.388	0.0248	No
129	NELL2	2340725 4280301 5420008	14841	-0.399	0.0239	No
130	ATAD2	870242 2260687	15095	-0.464	0.0132	No
131	DDB2	3520341 4610168 4850184 4920717	15132	-0.473	0.0142	No
132	NUP62	1240128	15339	-0.545	0.0065	No
133	POLR2A	5220647	15341	-0.546	0.0099	No
134	PAQR4	730736	15378	-0.559	0.0115	No
135	PHF13	450435	15487	-0.599	0.0094	No
136	HIRA	4480609 5270167	15491	-0.601	0.0130	No
137	AP4M1	70609 3440128	16156	-0.936	-0.0170	No
138	MRPL40	2370215	16192	-0.951	-0.0129	No
139	SFRS10	6130528 6400438 7040112	16253	-0.992	-0.0099	No
140	USP52	3710215 6380133	16385	-1.057	-0.0103	No
141	RRM2	6350059 6940162	16418	-1.075	-0.0053	No
142	ATF5	5670685	16541	-1.156	-0.0046	No
143	TYRO3	3130193	16543	-1.158	0.0027	No
144	SFRS2	50707 380593	16661	-1.237	0.0041	No
145	SYNGR4	6520450	16728	-1.286	0.0087	No
146	ACBD6	4200446	16931	-1.462	0.0069	No
147	POLD1	4830026	17474	-1.881	-0.0105	No
148	MAZ	3360121 6940750	17643	-2.048	-0.0067	No
149	UNG	3130110 6100364	17685	-2.088	0.0042	No
150	MXD3	6220014	17737	-2.166	0.0151	No
151	HIST1H4A	1940600	17766	-2.198	0.0275	No
152	HIST1H2BK	6130433	18216	-2.931	0.0217	No