Details for gene set V$E2F

Table: GSEA Results Summary

Dataset	Set_03_absentNotch_versus_truncNotch.phenotype_absentNotch_versus_truncNotch.cls #absentNotch_versus_truncNotch.phenotype_absentNotch_versus_truncNotch.cls #absentNotch_versus_truncNotch_repos
Phenotype	phenotype_absentNotch_versus_truncNotch.cls#absentNotch_versus_truncNotch_repos
Upregulated in class	absentNotch
GeneSet	V$E2F_Q4
Enrichment Score (ES)	0.6003529
Normalized Enrichment Score (NES)	1.7813005
Nominal p-value	0.0
FDR q-value	0.0035867046
FWER p-Value	0.022

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	GSPT1	5420050	18	5.469	0.0338	Yes
2	PPM1D	1690193	24	5.188	0.0665	Yes
3	SFRS1	2360440	39	4.846	0.0966	Yes
4	CTCF	5340017	61	4.586	0.1246	Yes
5	UGCGL1	4230072	63	4.528	0.1534	Yes
6	TMPO	4050494	74	4.448	0.1811	Yes
7	ZCCHC8	2260332 2350487	105	4.140	0.2058	Yes
8	EED	2320373	110	4.095	0.2317	Yes
9	CDCA7	3060097	118	4.044	0.2570	Yes
10	RBL1	3130372	151	3.829	0.2796	Yes
11	KPNB1	1690138	152	3.826	0.3040	Yes
12	BRMS1L	6110609	154	3.813	0.3282	Yes
13	PHC1	520195	171	3.750	0.3511	Yes
14	MCM4	2760673 5420711	225	3.505	0.3706	Yes
15	DCK	6900411	283	3.283	0.3884	Yes
16	SOAT1	1190019	288	3.267	0.4089	Yes
17	NASP	2260139 2940369 5130707	312	3.185	0.4279	Yes
18	PCNA	940754	337	3.090	0.4463	Yes
19	DNMT1	2260097	405	2.929	0.4613	Yes
20	POLD3	6400278	499	2.715	0.4735	Yes
21	HTF9C	3190048 4120132	583	2.513	0.4850	Yes
22	H2AFZ	1470168	673	2.360	0.4952	Yes
23	ALDH6A1	1770746	1035	1.852	0.4874	Yes
24	PRPS1	6350129	1049	1.834	0.4984	Yes
25	ACO2	4230600	1057	1.827	0.5096	Yes
26	POLE4	6860097	1103	1.773	0.5185	Yes
27	STMN1	1990717	1146	1.733	0.5272	Yes
28	CDC25A	3800184	1196	1.670	0.5352	Yes
29	NCL	2360463 4540279	1310	1.541	0.5389	Yes
30	ILF3	940722 3190647 6520110	1392	1.453	0.5437	Yes
31	HNRPA1	4670398 5050687	1396	1.449	0.5528	Yes
32	SUMO1	1990364 2760338 6380195	1458	1.382	0.5583	Yes
33	MCM6	60092 540181 6510110	1526	1.312	0.5630	Yes
34	E2F1	5360093	1556	1.284	0.5696	Yes
35	FANCD2	1850280 6840348	1699	1.150	0.5692	Yes
36	UFD1L	870020	1773	1.092	0.5722	Yes
37	SFRS7	2760408	1858	1.040	0.5742	Yes
38	AK2	4590458 4760195 6110097	1878	1.028	0.5798	Yes
39	PPP1CC	6380300 2510647	1943	0.993	0.5826	Yes
40	NOLC1	2350195	1964	0.983	0.5878	Yes
41	GMNN	2630148	1999	0.965	0.5921	Yes
42	SNRPD1	4480162	2196	0.847	0.5868	Yes
43	PHF5A	2690519	2377	0.753	0.5819	Yes
44	DNAJC11	360465 3390215	2423	0.723	0.5840	Yes
45	MYH10	2640673	2426	0.718	0.5885	Yes
46	MCM3	5570068	2610	0.627	0.5826	Yes
47	RAB11B	3990609	2644	0.614	0.5847	Yes
48	CHD2	4070039	2653	0.611	0.5882	Yes
49	MCM7	3290292 5220056	2662	0.607	0.5916	Yes
50	USP37	2470433	2706	0.580	0.5929	Yes
51	CDC6	4570296 5360600	2713	0.578	0.5963	Yes
52	PHF15	6550066 6860673	2851	0.521	0.5922	Yes
53	CDT1	3780682	2867	0.514	0.5946	Yes
54	EZH2	6130605 6380524	2881	0.506	0.5972	Yes
55	MSH2	6180273	2927	0.488	0.5978	Yes
56	CLSPN	2190239 2630687 5550632	2938	0.483	0.6004	Yes
57	TBX6	4730139 6840647	3002	0.462	0.5999	No
58	SLC38A1	520465	3087	0.429	0.5981	No
59	SLCO3A1	1050408 2370156 6110072	3287	0.360	0.5896	No
60	E2F3	50162 460180	3320	0.350	0.5901	No
61	HIST1H2AH	3710333	3331	0.348	0.5917	No
62	WEE1	3390070	3430	0.317	0.5884	No
63	CDC45L	70537 3130114	3466	0.305	0.5885	No
64	ASXL2	130670	3506	0.294	0.5882	No
65	CORT	360008 2340092	3541	0.283	0.5882	No
66	ADAMTS2	2650025 6370133 6840670	3598	0.265	0.5869	No
67	STAG2	4540132	3638	0.254	0.5864	No
68	PPP1R8	6290292	3785	0.219	0.5798	No
69	ERBB2IP	580253 1090672	3909	0.196	0.5744	No
70	POLA2	940519	4144	0.155	0.5627	No
71	HS6ST3	5910138	4439	0.119	0.5476	No
72	HNRPD	4120021	4486	0.114	0.5458	No
73	E2F7	4200056	4524	0.111	0.5445	No
74	FHOD1	2680279	4555	0.108	0.5436	No
75	TOPBP1	6020333	4595	0.105	0.5421	No
76	SP3	3840338	5216	0.066	0.5090	No
77	KCNA6	450291 1400086 1660291 2470576	5558	0.053	0.4908	No
78	PCSK1	2350148	5571	0.053	0.4905	No
79	UXT	110019 5080066	5961	0.041	0.4697	No
80	JPH1	610739	6081	0.037	0.4635	No
81	GRIA4	2640131	6252	0.033	0.4545	No
82	FMO4	360735	6310	0.031	0.4516	No
83	ABI2	940368 4200092	6473	0.028	0.4430	No
84	RHD	4050168	6672	0.023	0.4324	No
85	SLC6A4	2230372	6727	0.022	0.4297	No
86	SMAD6	870504	6850	0.019	0.4232	No
87	RQCD1	1850139	7199	0.013	0.4044	No
88	CRK	1230162 4780128	7694	0.004	0.3777	No
89	STAG1	1190300 1400722 4590100	7962	-0.000	0.3632	No
90	NUP153	7000452	8186	-0.004	0.3512	No
91	FBXO5	2630551	8235	-0.005	0.3486	No
92	ARHGAP6	2060121	8632	-0.011	0.3272	No
93	CBX5	3830072 6290167	8836	-0.015	0.3163	No
94	GABRB3	4150164	8891	-0.016	0.3135	No
95	PRKDC	1400072 4230541	9467	-0.026	0.2825	No
96	TREX2	4920707	9493	-0.027	0.2813	No
97	INSM1	3450671	9698	-0.030	0.2705	No
98	PAX6	1190025	9850	-0.033	0.2625	No
99	POLE2	6110041	9924	-0.035	0.2588	No
100	EFNA5	460707 2190519	10306	-0.043	0.2384	No
101	DMD	1740041 3990332	10389	-0.045	0.2343	No
102	GPRC5B	2760114	10916	-0.057	0.2061	No
103	IPO7	2190746	10918	-0.057	0.2064	No
104	STK35	2360121	11527	-0.075	0.1740	No
105	NRP2	4070400 5860041 6650446	11605	-0.077	0.1703	No
106	PODN	3710068	11862	-0.087	0.1570	No
107	MCM2	5050139	11994	-0.092	0.1505	No
108	RAD51	6110450 6980280	12021	-0.093	0.1497	No
109	DNAJC9	6130019	12121	-0.098	0.1449	No
110	EPHB1	4610056	12404	-0.113	0.1304	No
111	MCM8	6130743	12548	-0.120	0.1234	No
112	CASP8AP2	5910593	12572	-0.121	0.1229	No
113	ARID4A	520156 1050707	12750	-0.134	0.1142	No
114	HNRPUL1	2120008 4920408 5570180 6370609 6770403	12896	-0.143	0.1072	No
115	HNRPR	2320440 2900601 4610008	13138	-0.161	0.0952	No
116	WNT3	2360685	13290	-0.173	0.0881	No
117	PIM1	630047	13494	-0.191	0.0784	No
118	HOXC10	5360170	13588	-0.204	0.0746	No
119	RPS6KA5	2120563 7040546	13898	-0.239	0.0594	No
120	KCND2	1170128 2100112	13984	-0.250	0.0564	No
121	SEMA5A	6200110 6520435	14008	-0.252	0.0567	No
122	RANBP1	430215 1090180	14100	-0.266	0.0535	No
123	YBX2	3520441	14163	-0.275	0.0519	No
124	IL4I1	3190161	14256	-0.291	0.0488	No
125	HCN3	3940438 6840750	14393	-0.314	0.0434	No
126	ZBTB4	6450441	14441	-0.322	0.0429	No
127	HMGN2	3140091	14503	-0.332	0.0417	No
128	CCNT1	2450563 5390184	14574	-0.345	0.0401	No
129	ING3	110438 2060390	14752	-0.380	0.0329	No
130	PVRL1	2570167 5220519 5890500 3190309	14778	-0.388	0.0340	No
131	NELL2	2340725 4280301 5420008	14841	-0.399	0.0332	No
132	ATAD2	870242 2260687	15095	-0.464	0.0225	No
133	DDB2	3520341 4610168 4850184 4920717	15132	-0.473	0.0235	No
134	EPC1	1570050 5290095 6900193	15244	-0.514	0.0208	No
135	NUP62	1240128	15339	-0.545	0.0192	No
136	POLR2A	5220647	15341	-0.546	0.0226	No
137	PAQR4	730736	15378	-0.559	0.0242	No
138	PHF13	450435	15487	-0.599	0.0222	No
139	HIRA	4480609 5270167	15491	-0.601	0.0258	No
140	AP4M1	70609 3440128	16156	-0.936	-0.0042	No
141	MRPL40	2370215	16192	-0.951	-0.0000	No
142	SFRS10	6130528 6400438 7040112	16253	-0.992	0.0030	No
143	USP52	3710215 6380133	16385	-1.057	0.0027	No
144	RRM2	6350059 6940162	16418	-1.075	0.0078	No
145	ATF5	5670685	16541	-1.156	0.0085	No
146	TYRO3	3130193	16543	-1.158	0.0158	No
147	SFRS2	50707 380593	16661	-1.237	0.0173	No
148	SYNGR4	6520450	16728	-1.286	0.0219	No
149	ACBD6	4200446	16931	-1.462	0.0203	No
150	POLD1	4830026	17474	-1.881	0.0029	No
151	MAZ	3360121 6940750	17643	-2.048	0.0068	No
152	UNG	3130110 6100364	17685	-2.088	0.0179	No
153	MXD3	6220014	17737	-2.166	0.0289	No
154	HIST1H2BK	6130433	18216	-2.931	0.0217	No