Details for gene set V$AP1

Table: GSEA Results Summary

Dataset	Set_03_absentNotch_versus_truncNotch.phenotype_absentNotch_versus_truncNotch.cls #absentNotch_versus_truncNotch.phenotype_absentNotch_versus_truncNotch.cls #absentNotch_versus_truncNotch_repos
Phenotype	phenotype_absentNotch_versus_truncNotch.cls#absentNotch_versus_truncNotch_repos
Upregulated in class	truncNotch
GeneSet	V$AP1_Q6
Enrichment Score (ES)	-0.4246317
Normalized Enrichment Score (NES)	-1.2325579
Nominal p-value	0.056013178
FDR q-value	1.0
FWER p-Value	1.0

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	PPP2CA	3990113	115	4.067	0.0233	No
2	TRIM8	6130441	453	2.806	0.0254	No
3	ATP1B1	3130594	478	2.762	0.0442	No
4	XPOT	7050184	553	2.580	0.0590	No
5	ICK	1580746 3140021	568	2.543	0.0767	No
6	NR1D1	2360471 770746 6590204	602	2.480	0.0929	No
7	CYFIP1	5690082	664	2.374	0.1069	No
8	PSMD7	2030619 6220594	697	2.328	0.1221	No
9	NEFH	630239	1061	1.821	0.1156	No
10	PDAP1	1410735	1100	1.779	0.1265	No
11	PSMD12	730044	1178	1.690	0.1346	No
12	TCF12	3610324 7000156	1276	1.578	0.1408	No
13	RBBP7	430113 450450 2370309	1507	1.334	0.1380	No
14	YWHAZ	1230717	1558	1.283	0.1446	No
15	BTK	3130044	1814	1.068	0.1385	No
16	WNT6	4570364	1838	1.055	0.1450	No
17	SLC16A6	1690156	1865	1.035	0.1511	No
18	TRAF3	5690647	2043	0.943	0.1483	No
19	LAMC1	4730025	2095	0.908	0.1522	No
20	POLR3E	380152	2169	0.869	0.1545	No
21	PKN3	2260538	2249	0.816	0.1562	No
22	GTF2B	6860685	2263	0.810	0.1613	No
23	APOBEC1	4610022	2287	0.801	0.1659	No
24	GPX1	4150093	2345	0.768	0.1684	No
25	CMAS	2190129	2480	0.688	0.1661	No
26	RIN1	510593	2853	0.520	0.1497	No
27	PSMD4	430068	2925	0.488	0.1494	No
28	ABI3	1740563	3038	0.448	0.1466	No
29	SCOC	610048 2230053	3099	0.427	0.1465	No
30	MCART1	5270059	3180	0.397	0.1450	No
31	LRRFIP2	670575 730152 6590438	3289	0.359	0.1418	No
32	LTBP3	1190162 2650440 6520451	3298	0.354	0.1439	No
33	VDR	130156 510438	3329	0.348	0.1448	No
34	PEA15	4590685	3440	0.313	0.1411	No
35	ROCK2	1780035 5720025	3498	0.295	0.1402	No
36	CASK	2340215 3290576 6770215	3581	0.271	0.1377	No
37	EIF4E	1580403 70133 6380215	3604	0.264	0.1384	No
38	APBA2BP	5700341	3619	0.259	0.1395	No
39	CDKN1A	4050088 6400706	3730	0.231	0.1353	No
40	NEK6	3360687	3818	0.213	0.1321	No
41	COL27A1	1740390	3864	0.205	0.1311	No
42	PITPNC1	3990017	3868	0.205	0.1325	No
43	LAMA3	1190131 5290239	3969	0.184	0.1284	No
44	DTNA	1340600 1780731 2340278 2850132	4019	0.174	0.1270	No
45	LAPTM5	5550372	4030	0.172	0.1277	No
46	IDS	360619 5720161	4151	0.153	0.1223	No
47	IBRDC2	5130041	4167	0.152	0.1226	No
48	PTP4A1	130692	4343	0.130	0.1140	No
49	PCDH9	2100136	4371	0.126	0.1135	No
50	NFATC4	2470735	4557	0.108	0.1042	No
51	MARK1	450484	4561	0.108	0.1049	No
52	KCNA2	5080403	4589	0.105	0.1042	No
53	LAMC2	450692 2680041 4200059 4670148	4629	0.102	0.1028	No
54	PFTK1	1780181	4849	0.086	0.0915	No
55	SLC26A1	2190142	5043	0.075	0.0816	No
56	DSCR1L1	940438	5182	0.067	0.0746	No
57	GNAI1	4560390	5227	0.065	0.0727	No
58	SPARC	1690086	5355	0.060	0.0662	No
59	SNCB	3360133	5427	0.057	0.0628	No
60	XLKD1	520441	5562	0.053	0.0559	No
61	PTPRN	5900577	5725	0.048	0.0475	No
62	PLCD1	2030484	5822	0.044	0.0426	No
63	HOXD3	6450154	6348	0.030	0.0143	No
64	FAP	4560019	6354	0.030	0.0143	No
65	OMG	6760066	6670	0.023	-0.0026	No
66	UCN2	4590372	6699	0.023	-0.0040	No
67	SLC35E4	2370711	6806	0.020	-0.0096	No
68	USP13	1450670	6819	0.020	-0.0101	No
69	IL9	3440338	7451	0.008	-0.0443	No
70	DSTN	3140592	7472	0.008	-0.0453	No
71	EFNA1	3840672	7533	0.007	-0.0485	No
72	TRPV3	540341	7659	0.005	-0.0553	No
73	PHLDA2	4810494	8009	-0.001	-0.0742	No
74	IL1RN	2370333	8021	-0.001	-0.0748	No
75	AP2B1	1450184 2370148 3520139 4850593	8111	-0.003	-0.0796	No
76	SHC3	2690398	8135	-0.003	-0.0808	No
77	CRYBA2	5900138	8164	-0.003	-0.0823	No
78	HOXA11	6980133	8363	-0.007	-0.0930	No
79	UCHL3	1240735	8697	-0.012	-0.1110	No
80	SYT2	60609	8773	-0.014	-0.1149	No
81	FBXW11	6450632	8838	-0.015	-0.1183	No
82	S100A5	4120592	8860	-0.015	-0.1193	No
83	ANXA7	6110446	9021	-0.018	-0.1279	No
84	C3AR1	5720131	9056	-0.019	-0.1296	No
85	SFTPC	3290133	9209	-0.021	-0.1377	No
86	MYBPH	2190711	9266	-0.022	-0.1405	No
87	PSMD11	2340538 6510053	9447	-0.025	-0.1501	No
88	IGSF9	1770411	9449	-0.025	-0.1500	No
89	P2RXL1	4730390 5220446	9477	-0.026	-0.1513	No
90	PRDM1	3170347 3520301	9666	-0.030	-0.1613	No
91	GJB3	2650040	9686	-0.030	-0.1621	No
92	GAB2	1410280 2340520 4280040	9815	-0.033	-0.1688	No
93	WDFY3	3610041 4560333 4570273	9869	-0.034	-0.1714	No
94	LPP	1660541	9890	-0.034	-0.1722	No
95	GFAP	2060092	9930	-0.035	-0.1741	No
96	TIAL1	4150048 6510605	9953	-0.036	-0.1750	No
97	SPATS2	2360066	10071	-0.039	-0.1811	No
98	NR0B2	2470692	10261	-0.042	-0.1910	No
99	KBTBD5	6350025	10299	-0.043	-0.1927	No
100	ELK3	460377 1400762 3710497	10471	-0.047	-0.2017	No
101	EIF3S1	6130368 6770044	10825	-0.055	-0.2204	No
102	TRIB1	2320435	10969	-0.058	-0.2278	No
103	SCEL	3190129	10975	-0.058	-0.2276	No
104	DHRS3	360609	11160	-0.063	-0.2371	No
105	FGF12	1740446 2360037	11185	-0.064	-0.2380	No
106	OLR1	50025 3840484	11475	-0.073	-0.2531	No
107	AK5	6290348	11599	-0.077	-0.2592	No
108	GPR3	2970452	11609	-0.077	-0.2592	No
109	TLL1	2680315	11696	-0.081	-0.2632	No
110	IL23A	6290044	11743	-0.082	-0.2651	No
111	PTPRH	3870070	11751	-0.083	-0.2649	No
112	SFN	6290301 7510608	11872	-0.087	-0.2708	No
113	RIMS1	5670022	11892	-0.088	-0.2712	No
114	MMP7	1780497	11916	-0.089	-0.2718	No
115	MMP9	580338	12075	-0.096	-0.2797	No
116	BMP2	6620687	12259	-0.104	-0.2888	No
117	MAP1A	4920576	12429	-0.114	-0.2972	No
118	ST18	5720537	12571	-0.121	-0.3039	No
119	ELA1	3390167	12593	-0.122	-0.3042	No
120	STX17	2260037	12604	-0.123	-0.3038	No
121	PVALB	5570450	12646	-0.126	-0.3052	No
122	PSME4	380348 1770131	12656	-0.126	-0.3047	No
123	EEF1A2	2260162 5290086	12751	-0.134	-0.3088	No
124	GGN	1410528 4210082 5290170	12880	-0.142	-0.3148	No
125	COBL	2480452 6110066	12921	-0.145	-0.3159	No
126	DIRAS1	2640270	12992	-0.150	-0.3186	No
127	FLNC	2360048 5050270	13267	-0.171	-0.3322	No
128	AXIN2	3850131	13627	-0.208	-0.3502	No
129	STAT5B	6200026	13637	-0.210	-0.3491	No
130	HSPB7	1190441	13729	-0.220	-0.3525	No
131	NRIP3	1340372	13911	-0.240	-0.3605	No
132	PLEC1	6520292 50500 380075 1570088 2510692 2630497 2680017 2900746 4560497 4850376 6290398 7040471	14274	-0.293	-0.3780	No
133	RB1CC1	510494 7100072	14304	-0.298	-0.3775	No
134	GADD45A	2900717	14582	-0.346	-0.3900	No
135	PAPPA	4230463	14662	-0.361	-0.3916	No
136	CLSTN3	2350685	14822	-0.396	-0.3974	No
137	EPHA2	5890056	14854	-0.403	-0.3961	No
138	VIM	20431	15151	-0.483	-0.4087	No
139	BLMH	1410438	15152	-0.483	-0.4052	No
140	RTN4	50725 630647 870097 870184	15236	-0.512	-0.4059	No
141	DCN	510332 5340026 5900711 6550092	15257	-0.517	-0.4033	No
142	MDFI	6200041	15343	-0.546	-0.4039	No
143	ADORA2A	1990687	15521	-0.610	-0.4091	No
144	NFRKB	3130538	15572	-0.632	-0.4072	No
145	PSMD2	4670706 5050364	15757	-0.711	-0.4120	No
146	TMEM24	5860039	15819	-0.746	-0.4099	No
147	SCRN1	6040025 6580019	15889	-0.786	-0.4079	No
148	BAZ2A	730184	16198	-0.958	-0.4177	Yes
149	FHL3	1090369 2650017	16213	-0.968	-0.4114	Yes
150	PADI4	1740075 4810441	16280	-1.002	-0.4077	Yes
151	NDRG2	450403	16341	-1.032	-0.4034	Yes
152	AP2A2	130082	16438	-1.086	-0.4007	Yes
153	HSPB8	540563	16555	-1.166	-0.3986	Yes
154	PDGFRB	6450279	16571	-1.174	-0.3908	Yes
155	RIT1	5390338	16617	-1.206	-0.3845	Yes
156	SYTL1	510487	16683	-1.252	-0.3789	Yes
157	ECM1	940068 5390309	16804	-1.342	-0.3757	Yes
158	VASP	7050500	16831	-1.374	-0.3671	Yes
159	ABHD4	6760450	16929	-1.462	-0.3618	Yes
160	UBQLN1	110280 730376 2470133 6590594	16948	-1.469	-0.3521	Yes
161	TGFBR2	1780711 1980537 6550398	17052	-1.525	-0.3466	Yes
162	TAGLN2	4560121	17183	-1.619	-0.3418	Yes
163	DCTN2	540471 3780717	17212	-1.640	-0.3314	Yes
164	ABHD2	4850504 6840010	17346	-1.761	-0.3259	Yes
165	UBE2C	6130017	17457	-1.873	-0.3182	Yes
166	NCDN	50040 1980739 3520603	17519	-1.916	-0.3076	Yes
167	ADCK4	1660180	17583	-1.985	-0.2966	Yes
168	ROM1	3130685	17638	-2.044	-0.2847	Yes
169	PKP3	3710048	17669	-2.072	-0.2712	Yes
170	RAB3D	4210253	17701	-2.109	-0.2576	Yes
171	TBC1D17	1780450	17803	-2.248	-0.2467	Yes
172	CAMKK1	6370324	17832	-2.283	-0.2316	Yes
173	HDAC3	4060072	17839	-2.296	-0.2153	Yes
174	ENO1	5340128	17995	-2.530	-0.2053	Yes
175	LMNA	520471 1500075 3190167 4210020	18022	-2.565	-0.1880	Yes
176	ETV5	110017	18034	-2.603	-0.1697	Yes
177	ITPKC	5420021	18099	-2.678	-0.1537	Yes
178	CAPNS1	3940113	18173	-2.827	-0.1371	Yes
179	ABCA2	5050039	18231	-2.965	-0.1187	Yes
180	VAMP5	3830300	18347	-3.288	-0.1010	Yes
181	ABCD1	5670373	18368	-3.366	-0.0776	Yes
182	MAPK3	580161 4780035	18380	-3.390	-0.0536	Yes
183	AKT1S1	1660048	18416	-3.525	-0.0299	Yes
184	ALDOA	6290672	18596	-5.593	0.0011	Yes