Details for gene set SMTTTTGT

Table: GSEA Results Summary

Dataset	Set_03_absentNotch_versus_truncNotch.phenotype_absentNotch_versus_truncNotch.cls #absentNotch_versus_truncNotch.phenotype_absentNotch_versus_truncNotch.cls #absentNotch_versus_truncNotch_repos
Phenotype	phenotype_absentNotch_versus_truncNotch.cls#absentNotch_versus_truncNotch_repos
Upregulated in class	absentNotch
GeneSet	SMTTTTGT_UNKNOWN
Enrichment Score (ES)	0.55212116
Normalized Enrichment Score (NES)	1.7322506
Nominal p-value	0.0
FDR q-value	0.005662786
FWER p-Value	0.057

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	ITPR1	3450519	26	5.141	0.0209	Yes
2	MAPK6	6760520	38	4.847	0.0414	Yes
3	CTCF	5340017	61	4.586	0.0602	Yes
4	ACLY	1740609	64	4.517	0.0797	Yes
5	SIN3A	2190121	85	4.292	0.0973	Yes
6	SRPK2	6380341	87	4.282	0.1159	Yes
7	IPO11	70167	138	3.906	0.1301	Yes
8	CXCR4	4590519	174	3.739	0.1445	Yes
9	TLK1	7100605	183	3.696	0.1601	Yes
10	KLF7	50390	189	3.660	0.1758	Yes
11	BCL6	940100	232	3.485	0.1886	Yes
12	SFPQ	4760110	235	3.477	0.2037	Yes
13	CLK4	3440484 3610156	239	3.463	0.2186	Yes
14	PIAS1	5340301	284	3.281	0.2304	Yes
15	RNF44	5910692	290	3.259	0.2443	Yes
16	HNRPC	1570133 3610131	347	3.070	0.2546	Yes
17	CRKL	4050427	415	2.887	0.2635	Yes
18	AKAP8	4210026	436	2.839	0.2748	Yes
19	TRIM8	6130441	453	2.806	0.2861	Yes
20	ARPC2	6020484	468	2.771	0.2974	Yes
21	MSN	4060044	470	2.769	0.3094	Yes
22	DDX3X	2190020	494	2.725	0.3200	Yes
23	RYBP	60746	500	2.714	0.3315	Yes
24	GSK3B	5360348	510	2.696	0.3428	Yes
25	CD4	1090010	556	2.568	0.3515	Yes
26	ICK	1580746 3140021	568	2.543	0.3619	Yes
27	HN1	3360156	575	2.525	0.3726	Yes
28	AKAP8L	5290452	579	2.518	0.3834	Yes
29	CNN3	6110020	686	2.342	0.3878	Yes
30	IDH2	2680397	744	2.244	0.3944	Yes
31	SFRS3	770315 4230593	747	2.240	0.4041	Yes
32	YTHDF2	4060332 4610279	772	2.212	0.4124	Yes
33	MAP3K7IP2	2340242	820	2.145	0.4192	Yes
34	CCAR1	3190092	866	2.089	0.4258	Yes
35	FOXP1	6510433	1060	1.822	0.4232	Yes
36	AMMECR1	3800435	1092	1.786	0.4293	Yes
37	WBP4	2230019	1121	1.754	0.4354	Yes
38	STMN1	1990717	1146	1.733	0.4416	Yes
39	YWHAQ	6760524	1207	1.661	0.4456	Yes
40	JUP	2510671	1233	1.632	0.4513	Yes
41	RBMX	7100162 2900541	1283	1.574	0.4555	Yes
42	SMOC2	1170170	1299	1.553	0.4614	Yes
43	NFIX	2450152	1346	1.505	0.4654	Yes
44	EIF4G2	3800575 6860184	1379	1.470	0.4701	Yes
45	ILF3	940722 3190647 6520110	1392	1.453	0.4757	Yes
46	HNRPA1	4670398 5050687	1396	1.449	0.4819	Yes
47	TIAM1	5420288	1420	1.424	0.4868	Yes
48	PHF12	870400 3130687	1546	1.295	0.4856	Yes
49	MMP14	670079	1566	1.269	0.4901	Yes
50	RBM3	2360739 5700167	1574	1.265	0.4952	Yes
51	MBNL1	2640762 7100048	1576	1.263	0.5007	Yes
52	YWHAG	3780341	1591	1.251	0.5054	Yes
53	NRF1	2650195	1636	1.212	0.5082	Yes
54	APP	2510053	1689	1.158	0.5104	Yes
55	ETS2	360451	1716	1.141	0.5140	Yes
56	OLIG3	1050603	1719	1.140	0.5188	Yes
57	GADD45G	2510142	1766	1.097	0.5211	Yes
58	BTK	3130044	1814	1.068	0.5232	Yes
59	TPP2	3850093	1819	1.066	0.5276	Yes
60	H1FX	1190088	1884	1.021	0.5285	Yes
61	HMGB1	2120670 2350044	1916	1.002	0.5312	Yes
62	RBM5	3520402 5270121	1935	0.998	0.5346	Yes
63	TCF4	520021	1969	0.982	0.5370	Yes
64	COX7B	2340504	2045	0.942	0.5370	Yes
65	PCBP2	5690048	2057	0.935	0.5405	Yes
66	FUS	4760619	2058	0.935	0.5446	Yes
67	YWHAE	5310435	2086	0.911	0.5471	Yes
68	CLASP1	6860279	2182	0.859	0.5456	Yes
69	KCNN3	6520600 6420138	2186	0.856	0.5492	Yes
70	H2AFY	4730750	2222	0.836	0.5509	Yes
71	RBM12	4570239 6040411 6660129	2303	0.794	0.5500	Yes
72	SFRS5	3450176 6350008	2327	0.778	0.5521	Yes
73	CDK2AP1	2340156	2497	0.677	0.5458	No
74	PANK3	3060687	2529	0.660	0.5470	No
75	RAB10	2360008 5890020	2564	0.648	0.5480	No
76	CHD2	4070039	2653	0.611	0.5458	No
77	STC1	360161	2728	0.571	0.5443	No
78	FKBP5	2190048	2750	0.562	0.5456	No
79	GPR85	5130750 5910020	2823	0.530	0.5440	No
80	PHF15	6550066 6860673	2851	0.521	0.5448	No
81	NR4A2	60273	2891	0.502	0.5448	No
82	CSAD	770215	2904	0.497	0.5463	No
83	IGF1	1990193 3130377 3290280	2959	0.476	0.5454	No
84	EDARADD	840180 2360435 4560014	3005	0.461	0.5450	No
85	ZFP161	110546 4810195	3079	0.431	0.5429	No
86	SLC38A1	520465	3087	0.429	0.5444	No
87	KCTD15	2810735	3191	0.395	0.5405	No
88	CITED2	5670114 5130088	3236	0.379	0.5397	No
89	ELAVL4	50735 3360086 5220167	3310	0.352	0.5373	No
90	PDE4D	2470528 6660014	3326	0.349	0.5380	No
91	TCF7	3800736 5390181	3339	0.346	0.5388	No
92	SLC38A2	1470242 3800026	3463	0.306	0.5334	No
93	ZFP36L1	2510138 4120048	3513	0.292	0.5320	No
94	EN1	5360168 7050025	3547	0.281	0.5315	No
95	PCF11	1240180	3559	0.278	0.5321	No
96	LTBP1	780035 2100746 2760402 3780551 6550184 6860193	3722	0.234	0.5242	No
97	PPP1R8	6290292	3785	0.219	0.5218	No
98	MAGED1	6650332	3960	0.186	0.5131	No
99	DUSP6	5910286 7100070	4043	0.170	0.5094	No
100	P4HA1	2630692	4057	0.167	0.5094	No
101	MYO10	3830576 5570092	4154	0.153	0.5048	No
102	USP2	1190292 1240253 4850035	4272	0.138	0.4991	No
103	LRP1	6270386	4277	0.137	0.4994	No
104	SLC7A1	2450193 2710241	4280	0.137	0.4999	No
105	NR6A1	4010347	4308	0.134	0.4990	No
106	THRAP1	2470121	4332	0.131	0.4984	No
107	PTP4A1	130692	4343	0.130	0.4984	No
108	GNAO1	2510292 6590487	4349	0.129	0.4987	No
109	NLGN3	2650463	4393	0.124	0.4969	No
110	PNRC2	3360309	4418	0.121	0.4961	No
111	CSNK1A1	2340427	4478	0.115	0.4934	No
112	NR4A3	2900021 5860095 5910039	4516	0.112	0.4918	No
113	CPNE1	3440131	4655	0.100	0.4847	No
114	ERG	50154 1770739	4698	0.096	0.4829	No
115	DOC2B	2190021 2850142	4770	0.092	0.4794	No
116	RCOR1	5360717	4910	0.082	0.4722	No
117	GPR12	610288	5014	0.076	0.4669	No
118	SHH	5570400	5066	0.073	0.4644	No
119	GPR21	6520152	5131	0.070	0.4612	No
120	QKI	5220093 6130044	5165	0.068	0.4597	No
121	HOXA2	2120121	5170	0.068	0.4598	No
122	SP3	3840338	5216	0.066	0.4576	No
123	PABPC4	1990170 6760270 5390138	5287	0.063	0.4541	No
124	GPC3	6180735	5333	0.061	0.4519	No
125	CLDN2	580053	5358	0.060	0.4508	No
126	PELI2	1940364	5385	0.059	0.4497	No
127	D4ST1	1780671	5572	0.053	0.4398	No
128	HPCAL1	1980129 2350348	5707	0.048	0.4327	No
129	HOXD4	5900301	5824	0.044	0.4265	No
130	EDN3	2690722	5846	0.044	0.4256	No
131	SPO11	540288 4780239	6065	0.038	0.4138	No
132	LRRC4	3850041	6083	0.037	0.4131	No
133	NOX4	6040136	6087	0.037	0.4131	No
134	HOXD11	2260242	6203	0.034	0.4069	No
135	DDX3Y	1580278 4200519	6245	0.033	0.4048	No
136	SET	6650286	6363	0.030	0.3986	No
137	ETV1	70735 2940603 5080463	6483	0.027	0.3922	No
138	ISL1	4810239	6576	0.025	0.3873	No
139	GATA2	6590280	6654	0.024	0.3832	No
140	OMG	6760066	6670	0.023	0.3825	No
141	ELF5	3140156 5220020	6787	0.021	0.3763	No
142	NTRK2	6220463	6873	0.019	0.3717	No
143	PCYT1B	1780402	6939	0.018	0.3682	No
144	ENPP2	5860546	7002	0.017	0.3649	No
145	KLF12	1660095 4810288 5340546 6520286	7159	0.014	0.3565	No
146	HOXA4	940152	7228	0.012	0.3528	No
147	SPRR4	5720273	7270	0.011	0.3506	No
148	DSTN	3140592	7472	0.008	0.3397	No
149	NRXN1	460408 5340270 6370066	7772	0.003	0.3234	No
150	WNT9A	3830711	7818	0.002	0.3209	No
151	KIRREL3	2630195	7889	0.001	0.3171	No
152	CRYGA	2340309	7929	0.000	0.3150	No
153	CNGB3	2340408	8152	-0.003	0.3029	No
154	CCNJ	870047	8201	-0.004	0.3003	No
155	LHX9	2350112	8308	-0.006	0.2945	No
156	DDX5	940021 2630338 3440148	8359	-0.007	0.2919	No
157	CACNG3	520093	8412	-0.008	0.2890	No
158	LHX3	670164 1770280	8417	-0.008	0.2889	No
159	GLRA2	7000019	8486	-0.009	0.2852	No
160	PCDH8	2360047 4200452	8560	-0.010	0.2813	No
161	UNC5C	2640056	8602	-0.011	0.2791	No
162	NF2	4150735 6450139	8717	-0.013	0.2729	No
163	SATB2	2470181	8760	-0.014	0.2707	No
164	CBX5	3830072 6290167	8836	-0.015	0.2666	No
165	CHES1	4570121 5700162	8993	-0.017	0.2582	No
166	TRERF1	6370017 6940138	9036	-0.018	0.2560	No
167	NF1	6980433	9084	-0.019	0.2535	No
168	PURA	3870156	9192	-0.021	0.2478	No
169	MTSS1	780435 2370114	9197	-0.021	0.2476	No
170	LMO4	3800746	9219	-0.021	0.2466	No
171	TTL	6220048	9290	-0.023	0.2429	No
172	GABRA2	3290167	9345	-0.024	0.2400	No
173	LMO1	3170528	9375	-0.024	0.2385	No
174	ZBTB11	6520092	9377	-0.024	0.2386	No
175	EHF	4560088	9546	-0.027	0.2295	No
176	CHN1	6040441	9550	-0.028	0.2295	No
177	SS18	1940440 2900072 6900129	9629	-0.029	0.2254	No
178	HOXD12	580102	9693	-0.030	0.2221	No
179	SRGAP2	1050092 1230403 3830066 6130215	9714	-0.031	0.2211	No
180	TIAL1	4150048 6510605	9953	-0.036	0.2083	No
181	SLC10A1	2570154	9980	-0.036	0.2070	No
182	GATM	380671	10002	-0.037	0.2060	No
183	BMX	50136 2940242 4540059	10070	-0.039	0.2026	No
184	NRG1	1050332	10091	-0.039	0.2016	No
185	POU6F2	5270451	10119	-0.040	0.2003	No
186	ROR1	6220026	10155	-0.040	0.1986	No
187	SOX3	4570537	10159	-0.040	0.1986	No
188	GPR110	1190215	10182	-0.041	0.1976	No
189	MOG	610364 6020722	10305	-0.043	0.1911	No
190	HOXA5	6840026	10312	-0.043	0.1910	No
191	FRAS1	5080170 5670347	10371	-0.045	0.1880	No
192	DMD	1740041 3990332	10389	-0.045	0.1873	No
193	ALDOC	450121 610427	10595	-0.050	0.1763	No
194	SRGAP1	3940253	10634	-0.051	0.1744	No
195	LUC7L2	1850402 6350088	10711	-0.053	0.1705	No
196	FBN2	50435	10774	-0.054	0.1674	No
197	DAB1	2060193 7000605	10786	-0.054	0.1670	No
198	FLRT3	70685 2760497 6040519	10878	-0.056	0.1623	No
199	FGFR4	2650072	11007	-0.059	0.1556	No
200	JARID2	6290538	11009	-0.059	0.1558	No
201	DHRS3	360609	11160	-0.063	0.1479	No
202	ARHGEF17	2060008	11196	-0.064	0.1462	No
203	NEUROD6	4670731	11206	-0.064	0.1460	No
204	APLN	6620632	11345	-0.069	0.1388	No
205	KLHL4	5080438	11348	-0.069	0.1390	No
206	SLC30A3	1850451	11371	-0.070	0.1381	No
207	GPM6A	1660044 2750152	11392	-0.071	0.1373	No
208	SMAD1	630537 1850333	11401	-0.071	0.1372	No
209	GNAQ	430670 4210131 5900736	11427	-0.072	0.1361	No
210	CALD1	1770129 1940397	11583	-0.077	0.1280	No
211	MTUS1	780348 4920609	11736	-0.082	0.1201	No
212	EPN2	1340451 6550239 6860020 6860403	11740	-0.082	0.1203	No
213	MID1	4070114 4760458	11900	-0.089	0.1120	No
214	HOXD9	2570181	11905	-0.089	0.1121	No
215	DIO3	6180292	11947	-0.090	0.1103	No
216	GFPT2	2370129	12032	-0.094	0.1061	No
217	CRYGC	1660338	12104	-0.097	0.1027	No
218	LMOD1	2120035	12109	-0.097	0.1029	No
219	LHX6	2360731 3360397	12143	-0.099	0.1015	No
220	SMPD3	520164	12365	-0.110	0.0899	No
221	HOXB5	2900538	12437	-0.114	0.0865	No
222	ATRX	2340039 3610132 4210373	12507	-0.118	0.0833	No
223	KIF1B	1240494 2370139 4570270 6510102	12650	-0.126	0.0761	No
224	SCG3	1690050	12686	-0.128	0.0747	No
225	ARID4A	520156 1050707	12750	-0.134	0.0719	No
226	SEMA4C	1980315	12776	-0.135	0.0711	No
227	ATCAY	4070494	12861	-0.140	0.0671	No
228	GGN	1410528 4210082 5290170	12880	-0.142	0.0668	No
229	CLK1	1780551 2100102 2340347 2480347	13056	-0.155	0.0579	No
230	A2BP1	2370390 4590593 5550014	13078	-0.157	0.0574	No
231	NHLH2	6200021	13205	-0.166	0.0513	No
232	ONECUT1	6450136	13248	-0.169	0.0497	No
233	CNKSR2	110348 1770372	13453	-0.187	0.0394	No
234	SOX5	2370576 2900167 3190128 5050528	13506	-0.192	0.0374	No
235	FZD5	4070452	13550	-0.198	0.0359	No
236	PROX1	4210193	13600	-0.205	0.0342	No
237	PCDHA11	1510253	13684	-0.214	0.0306	No
238	PDGFB	3060440 6370008	13712	-0.217	0.0300	No
239	BACH2	6760131	13765	-0.225	0.0282	No
240	HOXB3	520292	13852	-0.234	0.0245	No
241	HOXC6	3850133 4920736	13953	-0.246	0.0201	No
242	IRAK1	4120593	14010	-0.252	0.0181	No
243	TRPM8	2340706	14017	-0.253	0.0189	No
244	ITGB4	1740021 3840482	14098	-0.265	0.0157	No
245	RRAS2	6290170	14142	-0.272	0.0145	No
246	FOXP2	3520561 4150372 4760524	14381	-0.312	0.0029	No
247	NEUROD1	3060619	14404	-0.316	0.0031	No
248	BMPR2	5340066 6960328	14463	-0.324	0.0013	No
249	DPF3	2650128 2970168	14500	-0.332	0.0008	No
250	PTGS1	730193 1780273 6450195	14542	-0.339	0.0001	No
251	SP8	4060576	14579	-0.346	-0.0004	No
252	DPYSL5	4900333	14600	-0.350	0.0000	No
253	BCL11A	6860369	14617	-0.352	0.0007	No
254	DAAM1	1500273	15017	-0.442	-0.0192	No
255	FGF8	6350504	15142	-0.478	-0.0238	No
256	NIN	3450576 5080048	15229	-0.510	-0.0263	No
257	EPC1	1570050 5290095 6900193	15244	-0.514	-0.0248	No
258	KCNH7	7510068	15267	-0.522	-0.0238	No
259	UBE2S	1850110	15306	-0.535	-0.0235	No
260	LMO6	4210072	15360	-0.553	-0.0240	No
261	TNFSF10	3170300	15472	-0.594	-0.0275	No
262	NEUROG1	380341	15532	-0.616	-0.0280	No
263	CAMK2G	630097	15552	-0.623	-0.0263	No
264	SFRS8	5130162 5700164	15620	-0.650	-0.0272	No
265	MKRN1	1410097	15718	-0.693	-0.0295	No
266	POU2F1	70577 430373 4850324 5910056	15724	-0.694	-0.0267	No
267	XKRX	3800192	16137	-0.921	-0.0452	No
268	DDX6	2630025 6770408	16148	-0.929	-0.0417	No
269	ATP5A1	1990722	16158	-0.938	-0.0381	No
270	SFRS10	6130528 6400438 7040112	16253	-0.992	-0.0389	No
271	TARDBP	870390 2350093	16405	-1.070	-0.0425	No
272	DUSP4	2690044 2850593	16415	-1.074	-0.0383	No
273	SFRS2	50707 380593	16661	-1.237	-0.0463	No
274	BTBD9	2450025	16775	-1.319	-0.0467	No
275	EPN1	4060725	17017	-1.507	-0.0533	No
276	ESRRA	6550242	17060	-1.530	-0.0490	No
277	LCP1	4280397	17133	-1.583	-0.0460	No
278	RAB33A	6590195	17187	-1.624	-0.0418	No
279	SLC3A2	5270358	17221	-1.649	-0.0365	No
280	CCR7	2060687	17301	-1.724	-0.0333	No
281	MAP4K2	4200037	17427	-1.841	-0.0321	No
282	BLOC1S1	130341 3940717	17485	-1.889	-0.0270	No
283	EHD1	3840731	17612	-2.017	-0.0251	No
284	PRKAG1	6450091	18012	-2.551	-0.0357	No
285	ITPK1	3360056	18018	-2.559	-0.0249	No
286	CCBL1	2350082	18087	-2.662	-0.0170	No
287	SLC12A8	4810092	18522	-4.146	-0.0227	No
288	MAPKAPK2	2850500	18609	-6.376	0.0004	No