DatasetSet_03_absentNotch_versus_truncNotch.phenotype_absentNotch_versus_truncNotch.cls
#absentNotch_versus_truncNotch.phenotype_absentNotch_versus_truncNotch.cls
#absentNotch_versus_truncNotch_repos
Phenotypephenotype_absentNotch_versus_truncNotch.cls#absentNotch_versus_truncNotch_repos
Upregulated in classabsentNotch
GeneSetATGTTAA,MIR-302C
Enrichment Score (ES)0.5794088
Normalized Enrichment Score (NES)1.7322882
Nominal p-value0.0
FDR q-value0.005977385
FWER p-Value0.057
Table: GSEA Results Summary



Fig 1: Enrichment plot: ATGTTAA,MIR-302C   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEDESCRIPTION
(from dataset)
GENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1RAB146860139215.3140.0402Yes
2H3F3B1410300424.8220.0765Yes
3NFYB1850053494.7540.1131Yes
4ACBD32760170594.6150.1485Yes
5SPOP450035604.5890.1842Yes
6SMAD45670519724.4650.2183Yes
7METAP135206321214.0350.2470Yes
8MAPRE132900371224.0310.2784Yes
9RAP1B37101381533.8250.3065Yes
10RNF113990068 50804581793.7230.3340Yes
11DDX3X21900204942.7250.3382Yes
12EPC224700955252.6510.3572Yes
13RNF626400355672.5440.3747Yes
14ATP6V1A65902426662.3640.3878Yes
15SLC35A12940750 32903646822.3450.4052Yes
16TBL1X64005247262.2800.4205Yes
17HNRPH11170086 3140546 3290471 6110184 61103737682.2190.4356Yes
18PPP2R5E70671 21200567762.2020.4523Yes
19TOB141501388722.0860.4633Yes
20FOXP1651043310601.8220.4674Yes
21TMEM332340022 394075010721.8100.4808Yes
22AMMECR1380043510921.7860.4937Yes
23FBXO33151050411631.7040.5031Yes
24SIRT1119073111901.6760.5147Yes
25NFIX245015213461.5050.5180Yes
26KIF4A1410465 476007015191.3170.5189Yes
27RAI1110377 534067015331.3040.5284Yes
28PTP4A2870154 6040070 6130242 676022415681.2690.5364Yes
29ATP6V1B2406052815691.2680.5462Yes
30MBNL12640762 710004815761.2630.5557Yes
31ATP10A478005017521.1090.5549Yes
32PPP3R11190041 157048717721.0920.5623Yes
33FKBP487003518051.0740.5689Yes
34EIF4A21170494 1740711 285050420110.9580.5653Yes
35ACACA2490612 268036920220.9540.5721Yes
36CGGBP1481005321400.8860.5727Yes
37BHLHB2704060321520.8780.5789Yes
38SFRS53450176 635000823270.7780.5755Yes
39PPP1R12A4070066 459016223930.7480.5778Yes
40PANK3306068725290.6600.5756Yes
41ASF1A705002025560.6510.5792Yes
42DLX136016826420.6140.5794Yes
43NFAT52510411 5890195 655015228010.5400.5750No
44TTC7B476072528160.5330.5784No
45ZNF319662009130200.4540.5709No
46SAMD854050030540.4410.5726No
47FBXO21655007030770.4320.5747No
48PPP5C313004731940.3940.5715No
49FBXL3591014232660.3710.5705No
50NRIP1319003932690.3690.5733No
51PDE4D2470528 666001433260.3490.5730No
52ZFP36L12510138 412004835130.2920.5652No
53SOX1161027935340.2840.5663No
54PLEKHA5665059335560.2790.5673No
55PCF11124018035590.2780.5694No
56FGFR24670601 5570402 694037736000.2650.5693No
57PCBP1105008837420.2290.5634No
58IL13RA1555060938120.2140.5613No
59SENP61340592 473014238250.2130.5623No
60TNFSF11635020439110.1960.5592No
61NUMB2450735 3800253 635004039510.1870.5586No
62GPRASP2399054139670.1840.5592No
63CREM840156 6380438 6660041 666016842210.1440.5466No
64SNAP913170056 569052042350.1420.5470No
65THRAP1247012143320.1310.5428No
66PCDH9210013643710.1260.5417No
67PPARGC1A467004043830.1250.5421No
68ACVR1684067144750.1150.5381No
69STRN5570706 705033345130.1120.5369No
70ZIC338002046560.1000.5300No
71B3GNT5478052847170.0950.5275No
72NR3C22480324 640009348450.0860.5213No
73AZIN1345007049420.0810.5167No
74SSX2IP461017650440.0750.5118No
75CYFIP2520577 604030050960.0720.5096No
76SUV39H21450672 637024251840.0670.5054No
77DMRT2263006854590.0560.4910No
78UBB481013856330.0510.4820No
79USP3378004756420.0500.4819No
80FMN245046356580.0500.4815No
81GOLPH32370195 698071156990.0490.4797No
82DNAJB62810309 557045157670.0460.4764No
83UNC5D199009159910.0400.4647No
84ZCCHC16589071160340.0390.4627No
85DDX3Y1580278 420051962450.0330.4516No
86CCNT22100390 415056363490.0300.4462No
87TEAD1247055170240.0160.4098No
88USP15610592 352050472360.0120.3984No
89SBF2306031573280.0100.3936No
90HBEGF203015673920.0090.3902No
91NEUROG2542027874280.0090.3884No
92MTMR6481052076430.0050.3768No
93ABR610079 1170609 3610195 567005077190.0040.3728No
94PPARA206002678620.0010.3651No
95LRCH229001627990-0.0010.3582No
96KCTD866605938075-0.0020.3537No
97SP438501768094-0.0020.3527No
98NUP15370004528186-0.0040.3478No
99ZFPM24600728346-0.0070.3393No
100YY161304518518-0.0100.3301No
101CBLN247601328528-0.0100.3297No
102MYT167705248862-0.0150.3117No
103GABRB341501648891-0.0160.3103No
104HOXA1331206479022-0.0180.3034No
105PTPRE1660286 29400959102-0.0190.2993No
106EDNRB4280717 64004359116-0.0200.2987No
107DACH12450593 57005929161-0.0200.2965No
108GABRA232901679345-0.0240.2868No
109PTPN38703699523-0.0270.2774No
110UBE2V242104849720-0.0310.2670No
111GPC459104089741-0.0310.2662No
112KHDRBS321201549759-0.0320.2655No
113FOXA137106099825-0.0330.2622No
114C1QTNF729706199918-0.0350.2575No
115FMR1505007510022-0.0370.2522No
116SOX3457053710159-0.0400.2451No
117MYO1B77037210173-0.0410.2447No
118RNF13237002110237-0.0420.2417No
119KHDRBS2352071710252-0.0420.2412No
120ARL4A629009110359-0.0440.2358No
121EIF3S16130368 677004410825-0.0550.2110No
122PAK7383016410980-0.0580.2031No
123DAZAP1589056311105-0.0620.1969No
124RHEB676044111179-0.0640.1934No
125NRP24070400 5860041 665044611605-0.0770.1710No
126TLL1268031511696-0.0810.1667No
127LIFR3360068 383010211707-0.0810.1668No
128TBR1513005311739-0.0820.1658No
129FZD4158052012005-0.0930.1521No
130BMP2662068712259-0.1040.1392No
131NPY2R622061212295-0.1060.1381No
132SLC30A86040348 684041112331-0.1090.1371No
133B4GALT5123069212700-0.1290.1181No
134PHACTR2158015412747-0.1330.1167No
135TPD52670463 461054112873-0.1420.1110No
136GAD12360035 314016713037-0.1530.1034No
137BTBD31980041 2510577 3190053 420074613039-0.1530.1045No
138ST6GALNAC3407056313148-0.1620.0999No
139MATR31940170 534027813247-0.1690.0959No
140POU3F2662048413280-0.1720.0955No
141WNT3236068513290-0.1730.0963No
142CREB5232036813496-0.1910.0867No
143CSMD31660427 194068713606-0.2060.0824No
144GPHN3290195 384012113698-0.2160.0792No
145HOXB352029213852-0.2340.0727No
146MAK294070613938-0.2430.0700No
147SF3B1700063213982-0.2490.0696No
148LRRTM4591010014189-0.2790.0606No
149USP12760541 5690438 622067314322-0.3020.0557No
150ZBTB4645044114441-0.3220.0518No
151ATP2C12630446 652025314495-0.3310.0515No
152BCL11A686036914617-0.3520.0477No
153ZMYND191570706 686055114848-0.4010.0384No
154CPEB2476033814942-0.4230.0366No
155MAGI16510500 1990239 467047114947-0.4250.0397No
156SIPA1L2485073114971-0.4310.0418No
157DAAM1150027315017-0.4420.0428No
158OTX2119047115050-0.4530.0446No
159HDHD22850411 694016815084-0.4620.0464No
160SH3D19602052015189-0.4960.0446No
161PCSK652009715361-0.5530.0396No
162SPRY1450253 46009315381-0.5610.0429No
163GABPA2360017 4780301 485027915785-0.7300.0268No
164CSNK1D4280280 4480167 645060016041-0.8660.0197No
165IMMT870450 428043816262-0.9960.0155No
166HNRPA2B11240619 6200161 6200494 698040816546-1.1600.0092No
167RNF138110142 3870129 6020441 640019316588-1.1810.0161No
168SFRS250707 38059316661-1.2370.0218No
169SON3120148 5860239 704040316751-1.3030.0271No
170ADD34150739 539060016871-1.4150.0317No
171UBQLN1110280 730376 2470133 659059416948-1.4690.0389No
172WDTC1169054117730-2.1570.0134No
173EHD3536048417758-2.1900.0289No
174PARP14780446 640033817812-2.2590.0436No
Table: GSEA details [plain text format]



Fig 2: ATGTTAA,MIR-302C   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: ATGTTAA,MIR-302C: Random ES distribution   
Gene set null distribution of ES for ATGTTAA,MIR-302C