DatasetSet_03_absentNotch_versus_truncNotch.phenotype_absentNotch_versus_truncNotch.cls
#absentNotch_versus_truncNotch.phenotype_absentNotch_versus_truncNotch.cls
#absentNotch_versus_truncNotch_repos
Phenotypephenotype_absentNotch_versus_truncNotch.cls#absentNotch_versus_truncNotch_repos
Upregulated in classabsentNotch
GeneSetATATGCA,MIR-448
Enrichment Score (ES)0.5824525
Normalized Enrichment Score (NES)1.732569
Nominal p-value0.0
FDR q-value0.006328996
FWER p-Value0.057
Table: GSEA Results Summary



Fig 1: Enrichment plot: ATATGCA,MIR-448   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEDESCRIPTION
(from dataset)
GENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1APPBP25130215135.7760.0646Yes
2STK42640152434.8140.1174Yes
3KRAS20601701593.7940.1540Yes
4TOPORS40605922273.5000.1899Yes
5RAP2C16901322513.4180.2273Yes
6KLF1346705633313.1090.2581Yes
7PELI13870215 69000403533.0550.2915Yes
8BRD116602785222.6680.3126Yes
9UBL364504586242.4410.3347Yes
10DNAJB1141501687312.2700.3546Yes
11SCN5A40700178092.1600.3748Yes
12AMMECR1380043510921.7860.3797Yes
13FBXO33151050411631.7040.3952Yes
14SIRT1119073111901.6760.4127Yes
15SLC7A11285013812151.6550.4301Yes
16CENTG2421005312361.6260.4474Yes
17FBXO281340358 473010012781.5760.4630Yes
18PPM2C336020915161.3210.4651Yes
19RNF19640031515291.3090.4792Yes
20ARNTL317046315381.3010.4935Yes
21LRRIQ23990064 6370673 638037217321.1300.4958Yes
22MAP2K61230056 294020417611.1020.5067Yes
23TPP2385009318191.0660.5157Yes
24PCDHGC52190056 345050419380.9950.5205Yes
25KCTD978057721050.9030.5218Yes
26KPNA3704008822270.8340.5246Yes
27WDR22620073923060.7930.5294Yes
28RNGTT780152 780746 109047123900.7490.5333Yes
29MYH311040024120.7320.5405Yes
30DYNLT3557039825430.6560.5408Yes
31ATXN350156 290009526540.6110.5418Yes
32MBNL2345070726790.5960.5472Yes
33PRKAR2B3130593 522057727150.5770.5518Yes
34DPP4572036927520.5610.5562Yes
35DLGAP44570672 569016128270.5290.5582Yes
36THRAP2492060028430.5240.5633Yes
37YTHDF34540632 4670717 704060928660.5150.5679Yes
38KLHL53060484 640029228710.5110.5735Yes
39NTF3589013128970.5000.5778Yes
40FUSIP1520082 539011431430.4100.5691Yes
41KCTD15281073531910.3950.5711Yes
42LYST3870039 700071732560.3740.5718Yes
43NRIP1319003932690.3690.5753Yes
44E2F350162 46018033200.3500.5766Yes
45SMURF1520609 58064733800.3340.5772Yes
46BICD2109041133930.3300.5802Yes
47PCDHGB13060504 134033835230.2890.5765Yes
48NCOA2940347 285072535320.2850.5793Yes
49SOX1161027935340.2840.5825Yes
50RANBP2428033836860.2420.5770No
51PCDHGB2513040837210.2340.5778No
52DTNA1340600 1780731 2340278 285013240190.1740.5637No
53PRKAB2698030040590.1670.5635No
54KLF5384034841560.1530.5600No
55ATP11A1240717 557060341820.1500.5603No
56PCDHGB6257043341990.1480.5611No
57DACT1150005043350.1310.5553No
58APBB2513040343520.1290.5559No
59PCDH9210013643710.1260.5563No
60DBC1461015645730.1070.5467No
61DAPK1557001047440.0930.5385No
62ZCCHC246059248660.0850.5329No
63AZIN1345007049420.0810.5297No
64SP3384033852160.0660.5157No
65GNAI1456039052270.0650.5159No
66RORB640003552900.0630.5133No
67PCDHGA10245013853010.0630.5134No
68RAB2B620009153060.0620.5139No
69RAB21557007054750.0560.5054No
70PCDHGA8212059355360.0540.5028No
71KCNB1361003556760.0490.4958No
72AFF2141048757110.0480.4945No
73IGF1R336049457190.0480.4947No
74PCDHGA1505037257580.0460.4931No
75MEF2C670025 78033858210.0440.4903No
76TMSB4X662011458760.0430.4878No
77PCDHGA4610003559780.0400.4828No
78BNC2481060361670.0350.4730No
79ADD11500176 3060139 339009264560.0280.4578No
80ETV170735 2940603 508046364830.0270.4567No
81WTAP401017665520.0260.4533No
82KCNMB23780128 476013665940.0250.4513No
83DNM373071166330.0240.4495No
84PCDHGB5635057769030.0180.4352No
85NLGN1567027869870.0170.4309No
86SYN2399059370980.0150.4251No
87PFN2730040 570002671740.0140.4212No
88BRP44L134060571850.0130.4208No
89BTG3705007971930.0130.4205No
90PCDHGA946029272930.0110.4153No
91ADAM10378015673460.0100.4126No
92CRY1677003975680.0060.4007No
93SERTAD22810673 684045076580.0050.3959No
94TCEAL187057777440.0030.3914No
95PCDHGA5226075078810.0010.3840No
96CASP45860047 66500937997-0.0010.3778No
97HOXA1169801338363-0.0070.3581No
98CLCN542003908433-0.0080.3544No
99PCDH82360047 42004528560-0.0100.3477No
100GLULD156905928800-0.0140.3349No
101FBXW1164506328838-0.0150.3331No
102GABRB341501648891-0.0160.3305No
103SH3GL21990176 38304948909-0.0160.3297No
104PCDHGB438302929166-0.0210.3161No
105PURA38701569192-0.0210.3150No
106WRNIP12320541 58907259428-0.0250.3025No
107COLEC122690717 45900869503-0.0270.2988No
108ANK265105469507-0.0270.2989No
109SS181940440 2900072 69001299629-0.0290.2927No
110WDFY33610041 4560333 45702739869-0.0340.2802No
111PCDHGA217805419878-0.0340.2801No
112PCDHGA633902429966-0.0360.2758No
113FMR1505007510022-0.0370.2732No
114PCDHGA3157011210437-0.0460.2513No
115PLEKHA66040041 704027010760-0.0540.2345No
116NAV14210519 662012910787-0.0540.2337No
117CNTN41780300 5570577 637001910830-0.0550.2320No
118DOC2A602012111376-0.0700.2033No
119GPM6A1660044 275015211392-0.0710.2033No
120GRIK2461016412047-0.0940.1689No
121RAB11FIP2457004012137-0.0980.1652No
122EPHA446075012418-0.1130.1513No
123GDF6134004812435-0.1140.1518No
124ZFHX4611016712510-0.1180.1491No
125PCDHGB746030912614-0.1240.1449No
126CXCL12580546 4150750 457006812660-0.1270.1439No
127AHR456067112673-0.1280.1447No
128TBX3257067212682-0.1280.1457No
129CACNA1C1660128 3780300 3870092 6290403 690030112940-0.1460.1334No
130CLK11780551 2100102 2340347 248034713056-0.1550.1289No
131VLDLR870722 3060047 5340452 655013113073-0.1560.1298No
132ELL2642009113189-0.1650.1255No
133ARMC8520408 940132 4060368 421010213291-0.1730.1220No
134ELF21690014 2480132 3060180 319050413296-0.1730.1237No
135PCDHGC4290015213391-0.1800.1206No
136GPHN3290195 384012113698-0.2160.1065No
137BACH2676013113765-0.2250.1055No
138SF3B1700063213982-0.2490.0966No
139PCDHGA7235002514055-0.2590.0956No
140PTBP1407073614401-0.3150.0805No
141HECTD22680014 306068914414-0.3180.0834No
142SOCS53830398 710009314544-0.3390.0803No
143UNC5A2120528 306032414561-0.3420.0833No
144BCL11A686036914617-0.3520.0843No
145PAPPA423046314662-0.3610.0859No
146ING3110438 206039014752-0.3800.0854No
147CPEB2476033814942-0.4230.0800No
148AZI21400300 268046314951-0.4260.0843No
149OTX2119047115050-0.4530.0842No
150BCL2730132 1570736 2470138 3800044 4810037 5690068 5860504 665016415135-0.4740.0850No
151KCNH7751006815267-0.5220.0838No
152DOCK9508003715282-0.5270.0890No
153SH3KBP1670102 2850458 700030915327-0.5420.0927No
154CAP1265027815489-0.6000.0908No
155GLCE485004016000-0.8450.0727No
156EPHB21090288 1410377 210054116370-1.0470.0645No
157FBXL1777017016527-1.1480.0690No
158HNRPA2B11240619 6200161 6200494 698040816546-1.1600.0812No
159XYLT2638003916700-1.2670.0872No
160ARID2110647 539043516945-1.4670.0905No
Table: GSEA details [plain text format]



Fig 2: ATATGCA,MIR-448   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: ATATGCA,MIR-448: Random ES distribution   
Gene set null distribution of ES for ATATGCA,MIR-448