Details for gene set HCC_SURVIVAL_GOOD_VS_POOR

Table: GSEA Results Summary

Dataset	Set_03_absentNotch_versus_truncNotch.phenotype_absentNotch_versus_truncNotch.cls #absentNotch_versus_truncNotch.phenotype_absentNotch_versus_truncNotch.cls #absentNotch_versus_truncNotch_repos
Phenotype	phenotype_absentNotch_versus_truncNotch.cls#absentNotch_versus_truncNotch_repos
Upregulated in class	truncNotch
GeneSet	HCC_SURVIVAL_GOOD_VS_POOR_UP
Enrichment Score (ES)	-0.6000015
Normalized Enrichment Score (NES)	-1.6569823
Nominal p-value	0.0
FDR q-value	0.48066616
FWER p-Value	0.706

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	MRPL46	360736	1204	1.663	-0.0418	No
2	SPINK2	3990093	1469	1.374	-0.0368	No
3	IL6R	520706 3800215	1627	1.219	-0.0282	No
4	ALAS1	6400440	1931	0.999	-0.0306	No
5	SGPL1	4480059	2212	0.840	-0.0340	No
6	SEC14L2	2640370	2311	0.786	-0.0283	No
7	AMFR	2810041	2448	0.709	-0.0257	No
8	F10	3830450	2836	0.526	-0.0392	No
9	ITPR2	5360128	3049	0.445	-0.0445	No
10	SRD5A1	5910347	3312	0.352	-0.0537	No
11	EHHADH	6200315	3931	0.191	-0.0844	No
12	HYAL1	3850341	4368	0.127	-0.1062	No
13	SLC6A12	3170685	4392	0.124	-0.1057	No
14	ZP3	4060767	4413	0.122	-0.1051	No
15	CES3	5050167 3290458	4458	0.117	-0.1058	No
16	SELENBP1	3850575	4491	0.114	-0.1060	No
17	RHBG	2810736	4597	0.105	-0.1102	No
18	SLC27A5	2850717	4659	0.099	-0.1121	No
19	MYRIP	1580471	5206	0.066	-0.1407	No
20	FMO3	2480369	5213	0.066	-0.1401	No
21	BAAT	730739	5480	0.056	-0.1537	No
22	LPIN1	1770358 3120059	5573	0.052	-0.1579	No
23	PKLR	1170400 2470114	5663	0.050	-0.1620	No
24	HGD	460390	5849	0.044	-0.1714	No
25	TTBK1	60605 1850722	6058	0.038	-0.1821	No
26	AQP9	2650047	6127	0.036	-0.1853	No
27	PCYT2	2630092 4590278	6158	0.035	-0.1864	No
28	HAO1	7050093	6382	0.030	-0.1980	No
29	CES1	1400494	6464	0.028	-0.2020	No
30	UGT1A6	4610368 6900086 4540092 2630075	6822	0.020	-0.2210	No
31	RGN	6200095	7043	0.016	-0.2327	No
32	ANXA9	1190195	7740	0.003	-0.2703	No
33	CES2	5340609	8203	-0.004	-0.2952	No
34	PIPOX	70750	8364	-0.007	-0.3037	No
35	ITIH1	670044	8438	-0.008	-0.3076	No
36	APOA5	6130471	8447	-0.008	-0.3079	No
37	CDO1	2480279	8582	-0.011	-0.3150	No
38	HPD	3120519	8748	-0.013	-0.3237	No
39	WNT11	1230278	8799	-0.014	-0.3262	No
40	MPDZ	130026 1990064 4050577	8835	-0.015	-0.3279	No
41	ABCG5	2810670	9008	-0.018	-0.3369	No
42	NF1	6980433	9084	-0.019	-0.3407	No
43	MTSS1	780435 2370114	9197	-0.021	-0.3465	No
44	AMACR	780215	9490	-0.026	-0.3619	No
45	AOX1	110082 6290450	9534	-0.027	-0.3638	No
46	APCS	2060500	9627	-0.029	-0.3684	No
47	GJB1	1240441	9777	-0.032	-0.3760	No
48	DPYS	3130670	9800	-0.033	-0.3767	No
49	KLK3	1500278	9814	-0.033	-0.3770	No
50	DIO1	4570279 5290112 5420148	9904	-0.035	-0.3813	No
51	SULT2A1	2650286	9926	-0.035	-0.3819	No
52	SERPINC1	1780717	10194	-0.041	-0.3958	No
53	F13B	6220278	10553	-0.049	-0.4145	No
54	TTPA	630576	10586	-0.050	-0.4155	No
55	PAH	3800309	10587	-0.050	-0.4148	No
56	MUCDHL	5720056	10689	-0.052	-0.4195	No
57	ASGR1	1850088	10732	-0.053	-0.4211	No
58	CPN2	6590291	11355	-0.070	-0.4537	No
59	APOC3	2030168	11403	-0.071	-0.4552	No
60	MST1	1400403	11602	-0.077	-0.4649	No
61	OTC	1740494	11618	-0.078	-0.4646	No
62	CABIN1	6900446	11742	-0.082	-0.4701	No
63	CPB2	4150167 6100333 6590735	12320	-0.108	-0.4997	No
64	CUTL2	2940692 6220687	12427	-0.114	-0.5039	No
65	C1QTNF4	60619	12683	-0.128	-0.5159	No
66	AR	6380167	12908	-0.144	-0.5260	No
67	PCK1	7000358	12936	-0.146	-0.5254	No
68	ABCA6	130538 1050706	12978	-0.150	-0.5255	No
69	INSR	1190504	13136	-0.161	-0.5317	No
70	PRDX6	4920397 6380601	13270	-0.171	-0.5365	No
71	GLYAT	6200239	13274	-0.171	-0.5343	No
72	MSRA	4570411	13577	-0.203	-0.5478	No
73	ABCC2	380202 5390300	13626	-0.208	-0.5475	No
74	VPREB1	3520280	13665	-0.212	-0.5465	No
75	MASP2	360110	13772	-0.226	-0.5491	No
76	F12	1090215 3520736	13872	-0.236	-0.5512	No
77	SALL1	5420020 7050195	13903	-0.239	-0.5494	No
78	SERPIND1	6110059	14024	-0.254	-0.5523	No
79	SLC2A2	5130537 5720722 6770079	14126	-0.270	-0.5540	No
80	G6PC	430093	14251	-0.289	-0.5567	No
81	RDH5	2970736 3940632 5340730 6370093 4610059	14354	-0.307	-0.5579	No
82	ABCG8	4780605	14484	-0.328	-0.5603	No
83	NDUFS2	4850020 6200402	14525	-0.335	-0.5577	No
84	SLC38A3	5340142	14904	-0.415	-0.5723	No
85	AMT	3180450	15268	-0.522	-0.5847	No
86	PPAP2A	1170397 3440288 3930270	15553	-0.624	-0.5913	Yes
87	CRAT	540020 2060364 3520148	15697	-0.683	-0.5894	Yes
88	ACOX2	450017	15698	-0.683	-0.5799	Yes
89	EPHX1	1740136	15851	-0.769	-0.5773	Yes
90	STARD10	1400619 4570170	15854	-0.772	-0.5666	Yes
91	IVD	2510673	15942	-0.812	-0.5600	Yes
92	INSIG1	1500332 3450458 4540301	16004	-0.848	-0.5514	Yes
93	CPT2	3940504 6180075	16195	-0.955	-0.5483	Yes
94	NDRG2	450403	16341	-1.032	-0.5417	Yes
95	HAGH	540358	16524	-1.148	-0.5354	Yes
96	ENPP5	1780338	16758	-1.308	-0.5297	Yes
97	SERPING1	5550440	16795	-1.332	-0.5130	Yes
98	SLC35D1	1740520	16950	-1.469	-0.5007	Yes
99	SLC25A10	1400609	17184	-1.619	-0.4907	Yes
100	DCXR	4730551	17213	-1.640	-0.4692	Yes
101	ABHD6	630717	17311	-1.735	-0.4502	Yes
102	SERPINF1	7040367	17710	-2.125	-0.4419	Yes
103	MAP4K1	4060692	17901	-2.392	-0.4187	Yes
104	MVK	1450717	17933	-2.434	-0.3863	Yes
105	PCCB	50670	18019	-2.559	-0.3550	Yes
106	ECHS1	2970184	18056	-2.631	-0.3201	Yes
107	EGLN2	540086	18073	-2.645	-0.2840	Yes
108	ALDH4A1	2450450	18103	-2.687	-0.2479	Yes
109	PINK1	380044 580577	18345	-3.282	-0.2150	Yes
110	KHK	1090204 3870204	18412	-3.498	-0.1696	Yes
111	C2	5390465	18488	-3.885	-0.1192	Yes
112	ACADS	110746	18536	-4.312	-0.0614	Yes
113	CRYL1	1340427	18565	-4.688	0.0028	Yes