Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | Set_03_absentNotch_versus_truncNotch.phenotype_absentNotch_versus_truncNotch.cls #absentNotch_versus_truncNotch.phenotype_absentNotch_versus_truncNotch.cls #absentNotch_versus_truncNotch_repos |
| Phenotype | phenotype_absentNotch_versus_truncNotch.cls#absentNotch_versus_truncNotch_repos |
| Upregulated in class | truncNotch |
| GeneSet | BRCA_PROGNOSIS_POS |
| Enrichment Score (ES) | -0.6531039 |
| Normalized Enrichment Score (NES) | -1.4805406 |
| Nominal p-value | 0.031835206 |
| FDR q-value | 0.66161364 |
| FWER p-Value | 1.0 |
| PROBE | DESCRIPTION (from dataset) | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|---|
| 1 | ALDH6A1 | 1770746 | 1035 | 1.852 | 0.0193 | No | ||
| 2 | NEO1 | 1990154 | 2335 | 0.771 | -0.0193 | No | ||
| 3 | RPS4X | 2690020 | 2791 | 0.544 | -0.0218 | No | ||
| 4 | FUT8 | 1340068 2340056 | 2982 | 0.470 | -0.0130 | No | ||
| 5 | CHPT1 | 4210215 6110273 | 4020 | 0.174 | -0.0618 | No | ||
| 6 | STK32B | 7000204 | 4653 | 0.100 | -0.0917 | No | ||
| 7 | BTG2 | 2350411 | 4757 | 0.092 | -0.0935 | No | ||
| 8 | RBP3 | 1400059 | 6346 | 0.030 | -0.1777 | No | ||
| 9 | RAB27B | 3850524 6380647 | 6376 | 0.030 | -0.1781 | No | ||
| 10 | TGFB3 | 1070041 | 6952 | 0.017 | -0.2083 | No | ||
| 11 | GSTM3 | 2570451 | 7219 | 0.013 | -0.2221 | No | ||
| 12 | PEX12 | 110286 | 7358 | 0.010 | -0.2292 | No | ||
| 13 | AP2B1 | 1450184 2370148 3520139 4850593 | 8111 | -0.003 | -0.2695 | No | ||
| 14 | MYLIP | 50717 4050672 | 9195 | -0.021 | -0.3269 | No | ||
| 15 | PIB5PA | 6900427 | 10507 | -0.048 | -0.3955 | No | ||
| 16 | MATN3 | 2570292 | 10577 | -0.049 | -0.3972 | No | ||
| 17 | RP5-860F19.3 | 3060253 | 11423 | -0.072 | -0.4398 | No | ||
| 18 | TBX3 | 2570672 | 12682 | -0.128 | -0.5023 | No | ||
| 19 | SCUBE2 | 2850315 5130040 | 13113 | -0.159 | -0.5190 | No | ||
| 20 | PECI | 2190520 | 13316 | -0.174 | -0.5228 | No | ||
| 21 | BBC3 | 2510494 4810278 | 14032 | -0.256 | -0.5509 | No | ||
| 22 | FGF18 | 1410168 2190706 | 14756 | -0.382 | -0.5743 | Yes | ||
| 23 | WISP1 | 2340019 3130692 | 14938 | -0.423 | -0.5670 | Yes | ||
| 24 | PCSK6 | 520097 | 15361 | -0.553 | -0.5673 | Yes | ||
| 25 | QDPR | 610017 | 15962 | -0.825 | -0.5662 | Yes | ||
| 26 | EVL | 1740113 | 17579 | -1.979 | -0.5729 | Yes | ||
| 27 | CIRBP | 1850408 | 17738 | -2.167 | -0.4937 | Yes | ||
| 28 | LETMD1 | 5270053 | 17824 | -2.272 | -0.4062 | Yes | ||
| 29 | ALDH4A1 | 2450450 | 18103 | -2.687 | -0.3124 | Yes | ||
| 30 | FBP1 | 1470762 | 18512 | -4.079 | -0.1691 | Yes | ||
| 31 | ACADS | 110746 | 18536 | -4.312 | 0.0043 | Yes |
