Details for gene set RNA_PROCESSING[GSEA]

Table: GSEA Results Summary

Dataset	Set_03_absentNotch_versus_normalThy.phenotype_absentNotch_versus_normalThy.cls #absentNotch_versus_normalThy.phenotype_absentNotch_versus_normalThy.cls #absentNotch_versus_normalThy_repos
Phenotype	phenotype_absentNotch_versus_normalThy.cls#absentNotch_versus_normalThy_repos
Upregulated in class	absentNotch
GeneSet	RNA_PROCESSING
Enrichment Score (ES)	0.6311323
Normalized Enrichment Score (NES)	1.7070715
Nominal p-value	0.0
FDR q-value	0.05815896
FWER p-Value	0.157

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	SNRPD3	2970050	22	7.611	0.0400	Yes
2	SFRS2IP	730687 1500373	31	7.139	0.0782	Yes
3	FBL	5130020	37	6.713	0.1142	Yes
4	NOLA2	4060167	41	6.591	0.1497	Yes
5	PPAN	540398	46	6.454	0.1844	Yes
6	U2AF1	5130292	56	6.059	0.2167	Yes
7	TRNT1	870053	69	5.737	0.2471	Yes
8	NOLC1	2350195	110	5.205	0.2730	Yes
9	RRP9	630451	148	4.877	0.2974	Yes
10	NSUN2	2120193	299	3.991	0.3109	Yes
11	NOL5A	5570139	312	3.941	0.3316	Yes
12	EXOSC2	6900471	358	3.727	0.3493	Yes
13	SNRP70	4200181	376	3.661	0.3682	Yes
14	HNRPDL	1050102 1090181 5360471	542	3.167	0.3764	Yes
15	PABPC1	2650180 2690253 6020632 1990270	553	3.139	0.3928	Yes
16	CPSF1	6290064	558	3.130	0.4095	Yes
17	TXNL4A	4120286 6510242	606	3.022	0.4233	Yes
18	EXOSC7	520538	615	2.995	0.4391	Yes
19	POP4	4560600	628	2.966	0.4545	Yes
20	PHF5A	2690519	652	2.899	0.4689	Yes
21	SFRS6	60224	743	2.731	0.4788	Yes
22	SNRPF	3170280	754	2.717	0.4930	Yes
23	DDX20	3290348	760	2.709	0.5074	Yes
24	SF3A3	6660603	793	2.637	0.5199	Yes
25	AARS	1570279 2370136	811	2.592	0.5330	Yes
26	NCBP2	5340500	855	2.514	0.5443	Yes
27	EFTUD2	2470707 4610148	919	2.425	0.5540	Yes
28	DBR1	1770286	985	2.318	0.5630	Yes
29	LSM4	3130180	1159	2.107	0.5651	Yes
30	SFRS9	3800047	1262	1.978	0.5703	Yes
31	SIP1	2640706	1380	1.833	0.5738	Yes
32	IVNS1ABP	4760601 6520113	1399	1.802	0.5826	Yes
33	SNRPD2	6110035	1403	1.796	0.5922	Yes
34	DGCR8	3450632	1473	1.717	0.5977	Yes
35	CSTF2	6040463	1550	1.631	0.6024	Yes
36	DDX39	3840148	1686	1.513	0.6033	Yes
37	SNRPD1	4480162	1850	1.362	0.6019	Yes
38	LSM3	780164	1854	1.358	0.6091	Yes
39	SF3A2	3140500	1920	1.295	0.6126	Yes
40	RNMT	1770500	2022	1.199	0.6136	Yes
41	SFRS2	50707 380593	2242	1.028	0.6073	Yes
42	PABPC4	1990170 6760270 5390138	2315	1.001	0.6088	Yes
43	CSTF1	4610129	2332	0.999	0.6134	Yes
44	RBM5	3520402 5270121	2345	0.997	0.6181	Yes
45	GRSF1	2100184	2370	0.985	0.6221	Yes
46	USP39	1090242 3520435 4760736	2429	0.953	0.6242	Yes
47	ZNF638	6510112	2434	0.950	0.6291	Yes
48	FUSIP1	520082 5390114	2622	0.828	0.6234	Yes
49	CDC2L2	1400671 5290168	2636	0.818	0.6272	Yes
50	DHX15	870632	2645	0.814	0.6311	Yes
51	RBMS1	6400014	2796	0.721	0.6269	No
52	RNGTT	780152 780746 1090471	3012	0.614	0.6186	No
53	SNRPG	2340551	3041	0.601	0.6204	No
54	SF3B4	110072	3061	0.592	0.6225	No
55	FARS2	5340575	3125	0.558	0.6221	No
56	PRPF31	6100360	3139	0.550	0.6244	No
57	KIN	6550014	3209	0.525	0.6235	No
58	CRNKL1	5050097	3315	0.481	0.6204	No
59	NUDT21	1240167	3411	0.446	0.6177	No
60	GEMIN5	3120577	3794	0.323	0.5988	No
61	SNRPB	1230097 2940086 3520671	3963	0.283	0.5913	No
62	GEMIN7	2320433	4091	0.257	0.5858	No
63	NOL3	4060605 4670121 6620487	4149	0.246	0.5840	No
64	SNW1	4010736	4527	0.187	0.5647	No
65	BCAS2	2340494	4584	0.179	0.5626	No
66	RBPMS	3990494	4604	0.177	0.5625	No
67	PTBP1	4070736	4661	0.171	0.5604	No
68	RBM6	840279 3840563 4780129 6020446	4776	0.156	0.5551	No
69	BICD1	110128 2940324	4789	0.155	0.5553	No
70	PRPF3	2510435 2940593 3610113 5390722	4966	0.139	0.5465	No
71	SYNCRIP	1690195 3140113 4670279	5008	0.136	0.5451	No
72	METTL1	4540670 5860162 7040433	5075	0.131	0.5422	No
73	RBM3	2360739 5700167	5376	0.109	0.5266	No
74	PPARGC1A	4670040	5446	0.104	0.5234	No
75	SSB	460286 3140717	6460	0.063	0.4690	No
76	SFRS1	2360440	7351	0.041	0.4211	No
77	RNPS1	610736 1090021	7551	0.037	0.4105	No
78	HNRPD	4120021	7929	0.029	0.3903	No
79	SRPK2	6380341	7985	0.028	0.3875	No
80	NUFIP1	6350241	8188	0.025	0.3767	No
81	HNRPF	670138	8351	0.022	0.3680	No
82	SLBP	6220601	9407	0.006	0.3110	No
83	PRPF4B	940181 2570300	9595	0.003	0.3009	No
84	EXOSC3	1740064	10037	-0.004	0.2771	No
85	GEMIN6	2120288 3830176	10962	-0.018	0.2272	No
86	CUGBP1	450292 510022 7050176 7050215	11648	-0.031	0.1904	No
87	INTS6	6040736 7570767	11938	-0.037	0.1749	No
88	ELAVL4	50735 3360086 5220167	12326	-0.046	0.1543	No
89	SNRPB2	5720577	12393	-0.048	0.1510	No
90	LSM5	4540398	12394	-0.048	0.1512	No
91	CPSF3	2480671	13172	-0.073	0.1096	No
92	RBMY1A1	6200053	13525	-0.088	0.0910	No
93	SNRPA1	1050735 6110131	14482	-0.165	0.0403	No
94	RPS14	430541	14945	-0.249	0.0166	No
95	CSTF3	3850156 5570458	15190	-0.320	0.0052	No
96	DHX16	940044	15318	-0.363	0.0002	No
97	KHDRBS1	1240403 6040040	15347	-0.371	0.0007	No
98	HNRPUL1	2120008 4920408 5570180 6370609 6770403	15455	-0.417	-0.0028	No
99	SFRS8	5130162 5700164	15556	-0.456	-0.0057	No
100	SPOP	450035	15589	-0.469	-0.0049	No
101	UPF1	430164 1190750	15612	-0.478	-0.0035	No
102	ADAT1	510390 6900019	15893	-0.615	-0.0153	No
103	SFRS5	3450176 6350008	15913	-0.624	-0.0130	No
104	DHX38	780243	15955	-0.645	-0.0117	No
105	NONO	7050014	16337	-0.902	-0.0274	No
106	SF3B3	3710044	16344	-0.907	-0.0229	No
107	SFRS10	6130528 6400438 7040112	16451	-0.976	-0.0233	No
108	SNRPN	4670195 5890494 6620110	16465	-0.984	-0.0187	No
109	ZNF346	2650577 3990170 4150348	16551	-1.030	-0.0177	No
110	GEMIN4	130278 2230075	16557	-1.033	-0.0124	No
111	PRPF8	1230497 1570600	16611	-1.073	-0.0095	No
112	SF3B2	6590576	16697	-1.150	-0.0078	No
113	ASCC3L1	6620494	16857	-1.313	-0.0093	No
114	SFPQ	4760110	16918	-1.375	-0.0051	No
115	DUSP11	1500088 4610280	16966	-1.417	-0.0000	No
116	SRRM1	6110025	17118	-1.597	0.0005	No
117	SFRS7	2760408	17122	-1.602	0.0090	No
118	SF3A1	1580315	17293	-1.814	0.0096	No
119	SRPK1	450110	17663	-2.414	0.0027	No
120	DHX8	6100139	17717	-2.531	0.0135	No
121	IGF2BP3	2810161 4230338	17945	-3.026	0.0176	No
122	DDX54	6220324	18073	-3.443	0.0294	No