Details for gene set RNA

Table: GSEA Results Summary

Dataset	Set_03_absentNotch_versus_normalThy.phenotype_absentNotch_versus_normalThy.cls #absentNotch_versus_normalThy.phenotype_absentNotch_versus_normalThy.cls #absentNotch_versus_normalThy_repos
Phenotype	phenotype_absentNotch_versus_normalThy.cls#absentNotch_versus_normalThy_repos
Upregulated in class	absentNotch
GeneSet	RNA_BINDING
Enrichment Score (ES)	0.5891952
Normalized Enrichment Score (NES)	1.6577564
Nominal p-value	0.0
FDR q-value	0.062738605
FWER p-Value	0.432

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	EIF2S2	770095 2810487	26	7.527	0.0264	Yes
2	SFRS2IP	730687 1500373	31	7.139	0.0525	Yes
3	FBL	5130020	37	6.713	0.0771	Yes
4	NOLA2	4060167	41	6.591	0.1012	Yes
5	TRNT1	870053	69	5.737	0.1210	Yes
6	MKI67IP	3060132	82	5.493	0.1406	Yes
7	EIF4B	5390563 5270577	144	4.909	0.1554	Yes
8	RPS3A	2470086	166	4.747	0.1718	Yes
9	MRPS7	4730270	199	4.522	0.1868	Yes
10	FUS	4760619	201	4.505	0.2033	Yes
11	MRPL12	3120112	204	4.467	0.2197	Yes
12	PCBP4	6350722	270	4.138	0.2315	Yes
13	MRPL3	1170736 5270025	290	4.043	0.2454	Yes
14	NOL5A	5570139	312	3.941	0.2588	Yes
15	EXOSC2	6900471	358	3.727	0.2701	Yes
16	SNRP70	4200181	376	3.661	0.2827	Yes
17	RPL30	4810369	445	3.439	0.2917	Yes
18	RPS19	5860066	470	3.345	0.3028	Yes
19	RPP14	7040014	478	3.316	0.3146	Yes
20	ETF1	6770075	490	3.269	0.3261	Yes
21	RPS6	2060168	492	3.265	0.3381	Yes
22	HNRPDL	1050102 1090181 5360471	542	3.167	0.3472	Yes
23	XPOT	7050184	552	3.140	0.3583	Yes
24	PABPC1	2650180 2690253 6020632 1990270	553	3.139	0.3699	Yes
25	CPSF1	6290064	558	3.130	0.3812	Yes
26	TXNL4A	4120286 6510242	606	3.022	0.3898	Yes
27	HSP90B1	5670576	613	3.010	0.4006	Yes
28	EXOSC7	520538	615	2.995	0.4116	Yes
29	RPL22	4070070	626	2.971	0.4220	Yes
30	POP4	4560600	628	2.966	0.4329	Yes
31	RPL3L	130167	657	2.890	0.4421	Yes
32	SCYE1	4730736	690	2.846	0.4509	Yes
33	EIF2AK2	870239	708	2.805	0.4603	Yes
34	RPS24	5420377	733	2.747	0.4691	Yes
35	SF3A3	6660603	793	2.637	0.4757	Yes
36	AARS	1570279 2370136	811	2.592	0.4843	Yes
37	NCL	2360463 4540279	893	2.461	0.4890	Yes
38	SUPV3L1	1170072	910	2.440	0.4972	Yes
39	EIF4A3	3440538	1006	2.292	0.5005	Yes
40	EIF4A1	1990341 2810300	1010	2.286	0.5087	Yes
41	PPP1R8	6290292	1024	2.270	0.5164	Yes
42	HNRPH1	1170086 3140546 3290471 6110184 6110373	1120	2.163	0.5192	Yes
43	RAE1	7050121	1136	2.145	0.5263	Yes
44	RPL21	110176 3610075 5700563	1146	2.124	0.5337	Yes
45	RPL29	1240075	1165	2.105	0.5405	Yes
46	EIF4G3	670707	1332	1.899	0.5385	Yes
47	SIP1	2640706	1380	1.833	0.5427	Yes
48	RAD51AP1	4050736 6370528	1432	1.757	0.5464	Yes
49	RPL38	70040 4060138 6200601	1465	1.722	0.5511	Yes
50	RPL14	5080471	1487	1.695	0.5562	Yes
51	CSTF2	6040463	1550	1.631	0.5588	Yes
52	CUGBP2	6180121 6840139	1638	1.548	0.5598	Yes
53	RPS23	7100594	1740	1.455	0.5597	Yes
54	APOBEC1	4610022	1849	1.362	0.5589	Yes
55	SNRPD1	4480162	1850	1.362	0.5639	Yes
56	IREB2	1570202 2640114	1870	1.342	0.5678	Yes
57	RPS3	1570017 2370170	1943	1.271	0.5686	Yes
58	RNMT	1770500	2022	1.199	0.5688	Yes
59	PAIP1	3870576	2144	1.099	0.5663	Yes
60	MBNL1	2640762 7100048	2223	1.036	0.5659	Yes
61	RPL31	5690685	2224	1.036	0.5697	Yes
62	PABPC4	1990170 6760270 5390138	2315	1.001	0.5685	Yes
63	HNRPA3	6020576 6550433 2630484 5130692	2321	1.000	0.5719	Yes
64	RPL27A	3130451 110195 6840494	2322	1.000	0.5756	Yes
65	CSTF1	4610129	2332	0.999	0.5788	Yes
66	RBM5	3520402 5270121	2345	0.997	0.5819	Yes
67	GRSF1	2100184	2370	0.985	0.5842	Yes
68	PARN	3840129	2433	0.951	0.5843	Yes
69	ZNF638	6510112	2434	0.950	0.5878	Yes
70	SFRS3	770315 4230593	2473	0.924	0.5892	Yes
71	FUSIP1	520082 5390114	2622	0.828	0.5842	No
72	RPLP2	5290020	2653	0.809	0.5856	No
73	RPS8	4120136	2668	0.799	0.5878	No
74	TEP1	7040735	2799	0.719	0.5834	No
75	CIRBP	1850408	2924	0.661	0.5791	No
76	RPS15A	1170180	2946	0.651	0.5803	No
77	RPS2	1340647	3005	0.619	0.5795	No
78	SF3B4	110072	3061	0.592	0.5787	No
79	RPL26	5220592	3111	0.565	0.5781	No
80	FARS2	5340575	3125	0.558	0.5794	No
81	KIN	6550014	3209	0.525	0.5769	No
82	ACO1	50114	3219	0.517	0.5783	No
83	RPL24	3870273	3274	0.497	0.5772	No
84	RPL4	2940014 5420324	3340	0.471	0.5754	No
85	RPL3	2060138	3388	0.452	0.5745	No
86	RPL18A	4570619	3400	0.449	0.5756	No
87	NUDT21	1240167	3411	0.446	0.5767	No
88	RPL7A	5420458	3623	0.375	0.5666	No
89	DDX19B	430520	3674	0.360	0.5652	No
90	RPL7	3840647	3766	0.330	0.5615	No
91	GEMIN5	3120577	3794	0.323	0.5612	No
92	NOL3	4060605 4670121 6620487	4149	0.246	0.5429	No
93	RBM4	2360113 5080750	4285	0.224	0.5364	No
94	NOL6	2810504 3120050 3840021 6860315	4326	0.218	0.5350	No
95	RPS21	3120673	4354	0.214	0.5344	No
96	STAU2	2810411	4495	0.192	0.5275	No
97	RPS7	6860113	4507	0.190	0.5276	No
98	RPS26	510139	4569	0.182	0.5249	No
99	BCAS2	2340494	4584	0.179	0.5248	No
100	RBPMS	3990494	4604	0.177	0.5245	No
101	RPLP1	3140292	4620	0.175	0.5243	No
102	PTBP1	4070736	4661	0.171	0.5227	No
103	ILF2	2900253	4717	0.163	0.5204	No
104	RBM6	840279 3840563 4780129 6020446	4776	0.156	0.5178	No
105	RPS17	2360528	4777	0.156	0.5184	No
106	RNASEH1	3840575	4818	0.153	0.5168	No
107	RPS13	1570364	4862	0.148	0.5150	No
108	TIAL1	4150048 6510605	4890	0.146	0.5140	No
109	PRPF3	2510435 2940593 3610113 5390722	4966	0.139	0.5105	No
110	SYNCRIP	1690195 3140113 4670279	5008	0.136	0.5088	No
111	RPL6	6040735	5020	0.135	0.5087	No
112	RBM3	2360739 5700167	5376	0.109	0.4898	No
113	PPARGC1A	4670040	5446	0.104	0.4864	No
114	CARS	460441 3140341	5519	0.100	0.4829	No
115	RPS29	580324	5556	0.098	0.4813	No
116	PURB	5360138	5595	0.097	0.4796	No
117	TIA1	4670373	5654	0.093	0.4768	No
118	NR0B1	6510750	5913	0.082	0.4631	No
119	TLR7	3140300	6265	0.069	0.4443	No
120	RPS10	4560673	6323	0.067	0.4414	No
121	SSB	460286 3140717	6460	0.063	0.4343	No
122	RPS25	520139	6735	0.055	0.4196	No
123	PTRF	2260204	7390	0.040	0.3842	No
124	AKAP1	110148 1740735 2260019 7000563	7510	0.038	0.3779	No
125	RNPS1	610736 1090021	7551	0.037	0.3758	No
126	RPL39	2370446	7881	0.030	0.3581	No
127	PSMA1	380059 2760195	8066	0.027	0.3482	No
128	HNRPH2	2630040 5720671	8119	0.026	0.3455	No
129	NUFIP1	6350241	8188	0.025	0.3419	No
130	HNRPF	670138	8351	0.022	0.3332	No
131	TLR9	670093 670706	8436	0.021	0.3287	No
132	TLR8	1240092	9156	0.010	0.2897	No
133	NPM1	4730427	9337	0.007	0.2799	No
134	SLBP	6220601	9407	0.006	0.2762	No
135	ADARB2	2190170	9537	0.004	0.2692	No
136	TLR3	6760451	9563	0.004	0.2678	No
137	AUH	5570152	9691	0.002	0.2610	No
138	MOV10L1	4050411	9909	-0.002	0.2492	No
139	FMR1	5050075	9997	-0.003	0.2445	No
140	TROVE2	4850458	10423	-0.010	0.2214	No
141	SNUPN	5050131	11051	-0.020	0.1874	No
142	CUGBP1	450292 510022 7050176 7050215	11648	-0.031	0.1552	No
143	LRRFIP1	870259 1050204 2760377	11929	-0.036	0.1401	No
144	RTCD1	7000041	12089	-0.040	0.1316	No
145	ELAVL4	50735 3360086 5220167	12326	-0.046	0.1190	No
146	RBM9	2510092 6290088	12354	-0.047	0.1177	No
147	LSM5	4540398	12394	-0.048	0.1157	No
148	ELAVL2	360181	12559	-0.052	0.1070	No
149	RBMY1A1	6200053	13525	-0.088	0.0549	No
150	RNASEL	2340133	13552	-0.090	0.0539	No
151	APOBEC2	1690520	13560	-0.090	0.0538	No
152	RPL18	6380181 3870195	13705	-0.099	0.0464	No
153	DAZL	4050082	13759	-0.102	0.0439	No
154	PPIE	2260079	13816	-0.106	0.0412	No
155	RPL41	6940112	13829	-0.107	0.0410	No
156	SURF6	3060451	13984	-0.119	0.0330	No
157	NOL4	5050446 5360519	14076	-0.126	0.0286	No
158	PCBP2	5690048	14631	-0.188	-0.0008	No
159	RPS14	430541	14945	-0.249	-0.0169	No
160	RPL28	6900136	14951	-0.251	-0.0163	No
161	ILF3	940722 3190647 6520110	15016	-0.268	-0.0187	No
162	CSTF3	3850156 5570458	15190	-0.320	-0.0270	No
163	RPL13	580280	15223	-0.328	-0.0275	No
164	RPL35	6940070	15309	-0.360	-0.0308	No
165	EIF4E	1580403 70133 6380215	15331	-0.366	-0.0306	No
166	HNRPAB	540504	15345	-0.371	-0.0299	No
167	KHDRBS1	1240403 6040040	15347	-0.371	-0.0286	No
168	HNRPUL1	2120008 4920408 5570180 6370609 6770403	15455	-0.417	-0.0329	No
169	DAZAP1	5890563	15551	-0.453	-0.0363	No
170	DICER1	540286	15633	-0.490	-0.0389	No
171	RPS5	580093	15706	-0.525	-0.0409	No
172	FAU	7100465	15800	-0.569	-0.0439	No
173	RPS20	1740092	15879	-0.606	-0.0458	No
174	ADAT1	510390 6900019	15893	-0.615	-0.0443	No
175	ROD1	2060324 3140332	16071	-0.709	-0.0513	No
176	TARBP2	60369 380026 4760377	16186	-0.786	-0.0546	No
177	PABPN1	460519	16210	-0.806	-0.0528	No
178	BRUNOL4	4490452 5080451	16298	-0.875	-0.0543	No
179	RPL19	5550592	16319	-0.890	-0.0521	No
180	EIF4H	610324	16340	-0.905	-0.0499	No
181	SF3B3	3710044	16344	-0.907	-0.0467	No
182	EIF4E2	2760072 5910609	16347	-0.908	-0.0434	No
183	PCBP1	1050088	16436	-0.964	-0.0447	No
184	SFRS10	6130528 6400438 7040112	16451	-0.976	-0.0418	No
185	RPL15	6290731	16469	-0.985	-0.0391	No
186	RPS27	5270242	16522	-1.014	-0.0382	No
187	ATXN1	5550156	16523	-1.014	-0.0344	No
188	ZNF346	2650577 3990170 4150348	16551	-1.030	-0.0321	No
189	SRP14	5390747	16583	-1.048	-0.0299	No
190	ZFP36L1	2510138 4120048	16590	-1.054	-0.0264	No
191	PRPF8	1230497 1570600	16611	-1.073	-0.0235	No
192	HNRPK	1190348 2060411 2570092 6840551	16794	-1.250	-0.0287	No
193	DUSP11	1500088 4610280	16966	-1.417	-0.0328	No
194	MRPL23	4070142	17028	-1.483	-0.0306	No
195	BARD1	3170348	17082	-1.550	-0.0278	No
196	SRRM1	6110025	17118	-1.597	-0.0238	No
197	RALY	940427 1740066	17119	-1.599	-0.0179	No
198	APTX	3360041 4560167	17306	-1.826	-0.0212	No
199	STAU1	2320494	17607	-2.324	-0.0290	No
200	EIF5A	1500059 5290022 6370026	17614	-2.334	-0.0207	No
201	HRB	1660397 6110398	17770	-2.632	-0.0194	No
202	IGF2BP3	2810161 4230338	17945	-3.026	-0.0176	No
203	JAKMIP1	6400020	18508	-6.172	-0.0254	No
204	ZFP36	2030605	18593	-8.440	0.0012	No