DatasetSet_03_absentNotch_versus_normalThy.phenotype_absentNotch_versus_normalThy.cls
#absentNotch_versus_normalThy.phenotype_absentNotch_versus_normalThy.cls
#absentNotch_versus_normalThy_repos
Phenotypephenotype_absentNotch_versus_normalThy.cls#absentNotch_versus_normalThy_repos
Upregulated in classnormalThy
GeneSetPOSITIVE_REGULATION_OF_CYTOKINE_BIOSYNTHETIC_PROCESS
Enrichment Score (ES)-0.828833
Normalized Enrichment Score (NES)-1.6592984
Nominal p-value0.003787879
FDR q-value0.29220122
FWER p-Value0.449
Table: GSEA Results Summary



Fig 1: Enrichment plot: POSITIVE_REGULATION_OF_CYTOKINE_BIOSYNTHETIC_PROCESS   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEDESCRIPTION
(from dataset)		GENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1TLR41690167 2650369 385033336960.352-0.1809No
2TLR6510102 339014850550.132-0.2472No
3APOA26510364 686041151750.121-0.2475No
4ELA21570452 527012953970.107-0.2539No
5GLMN5290563 589023959790.079-0.2811No
6TLR7314030062650.069-0.2929No
7IL12B46000872460.043-0.3435No
8IL9344033875660.037-0.3588No
9TNFRSF8870136 481044677350.033-0.3661No
10TLR9670093 67070684360.021-0.4027No
11TLR8124009291560.010-0.4409No
12TLR3676045195630.004-0.4625No
13IL2719903249887-0.001-0.4798No
14TLR1141052412176-0.042-0.6007No
15EREG50519 492012913211-0.074-0.6526No
16EBI3534030014685-0.195-0.7219No
17PRG3622002015398-0.390-0.7404No
18IRF461013317043-1.501-0.7527Yes
19CD281400739 421009317736-2.566-0.6597Yes
20BCL10236039718080-3.458-0.5028Yes
21SPN3520338 387067118293-4.381-0.2920Yes
22LTB399067218503-6.0990.0061Yes
Table: GSEA details [plain text format]



Fig 2: POSITIVE_REGULATION_OF_CYTOKINE_BIOSYNTHETIC_PROCESS   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: POSITIVE_REGULATION_OF_CYTOKINE_BIOSYNTHETIC_PROCESS: Random ES distribution   
Gene set null distribution of ES for POSITIVE_REGULATION_OF_CYTOKINE_BIOSYNTHETIC_PROCESS