Details for gene set V$USF

Table: GSEA Results Summary

Dataset	Set_03_absentNotch_versus_normalThy.phenotype_absentNotch_versus_normalThy.cls #absentNotch_versus_normalThy.phenotype_absentNotch_versus_normalThy.cls #absentNotch_versus_normalThy_repos
Phenotype	phenotype_absentNotch_versus_normalThy.cls#absentNotch_versus_normalThy_repos
Upregulated in class	absentNotch
GeneSet	V$USF_C
Enrichment Score (ES)	0.5351203
Normalized Enrichment Score (NES)	1.4860249
Nominal p-value	0.0
FDR q-value	0.2901814
FWER p-Value	0.873

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	TIMM10	610070 1450019	1	11.709	0.0523	Yes
2	FBL	5130020	37	6.713	0.0804	Yes
3	PFDN2	4230156	44	6.560	0.1094	Yes
4	LYAR	7000402	81	5.535	0.1322	Yes
5	EIF4B	5390563 5270577	144	4.909	0.1508	Yes
6	PA2G4	2030463	218	4.396	0.1665	Yes
7	G6PC3	1580487 5390253	227	4.337	0.1854	Yes
8	NUDC	4780025	234	4.307	0.2044	Yes
9	PPAT	1980019	255	4.206	0.2221	Yes
10	ABCB6	6350138	292	4.031	0.2382	Yes
11	HMOX1	1740687	318	3.917	0.2543	Yes
12	FKBP11	3170575	330	3.855	0.2710	Yes
13	IPO4	5050619	353	3.741	0.2865	Yes
14	EXOSC2	6900471	358	3.727	0.3029	Yes
15	EXOSC5	3370671	456	3.407	0.3129	Yes
16	RPS19	5860066	470	3.345	0.3272	Yes
17	AKAP12	1450739	474	3.321	0.3418	Yes
18	SDC1	3440471 6350408	533	3.182	0.3529	Yes
19	PABPC1	2650180 2690253 6020632 1990270	553	3.139	0.3659	Yes
20	HSPE1	3170438	569	3.119	0.3791	Yes
21	PAICS	610142	608	3.017	0.3905	Yes
22	EIF2C2	770451	614	3.009	0.4037	Yes
23	RPL22	4070070	626	2.971	0.4163	Yes
24	NR1D1	2360471 770746 6590204	825	2.570	0.4171	Yes
25	HYAL2	1500152	843	2.533	0.4275	Yes
26	SH3KBP1	670102 2850458 7000309	1035	2.251	0.4272	Yes
27	PER1	3290315	1057	2.234	0.4360	Yes
28	POLR3E	380152	1063	2.228	0.4457	Yes
29	PSMB3	4280594	1152	2.119	0.4504	Yes
30	HSPH1	1690017	1186	2.075	0.4579	Yes
31	MYOHD1	1410520	1196	2.067	0.4667	Yes
32	OPRS1	6130128 6290717	1219	2.040	0.4746	Yes
33	EFNB1	2970433	1264	1.975	0.4810	Yes
34	SRP72	3990427	1373	1.845	0.4834	Yes
35	IVNS1ABP	4760601 6520113	1399	1.802	0.4901	Yes
36	STMN1	1990717	1415	1.783	0.4973	Yes
37	HMGN2	3140091	1422	1.774	0.5049	Yes
38	GPD1	2480095	1444	1.744	0.5116	Yes
39	BHLHB2	7040603	1527	1.650	0.5145	Yes
40	ENO3	5270136	1602	1.577	0.5175	Yes
41	EIF4G1	4070446	1608	1.575	0.5243	Yes
42	RHEBL1	2810576	1695	1.504	0.5264	Yes
43	HERPUD1	7100440	1735	1.459	0.5308	Yes
44	POLR2H	5890242	1773	1.425	0.5351	Yes
45	TNFRSF21	6380100	2148	1.096	0.5197	No
46	FHOD1	2680279	2175	1.077	0.5231	No
47	SUCLG2	5340397 5700270	2178	1.075	0.5278	No
48	MORF4L2	6450133	2235	1.032	0.5294	No
49	ALDH3B1	4210010 6940403	2287	1.013	0.5312	No
50	PABPC4	1990170 6760270 5390138	2315	1.001	0.5342	No
51	UBXD3	5050193	2554	0.873	0.5252	No
52	H3F3A	2900086	2666	0.800	0.5227	No
53	EEF1E1	4540711	2850	0.695	0.5159	No
54	PPARGC1B	3290114	2928	0.659	0.5147	No
55	PSEN2	130382	3119	0.562	0.5069	No
56	CACNA1D	1740315 4730731	3123	0.558	0.5092	No
57	FARP1	5290102 7100341	3133	0.554	0.5112	No
58	B4GALT2	780037	3151	0.546	0.5127	No
59	CDC14A	4050132	3165	0.538	0.5144	No
60	CTSF	6100021	3178	0.533	0.5161	No
61	CAMK4	1690091	3191	0.529	0.5179	No
62	AVP	2100113	3202	0.526	0.5197	No
63	MYST3	5270500	3239	0.510	0.5200	No
64	GPX1	4150093	3255	0.503	0.5214	No
65	PTMA	5570148	3374	0.457	0.5171	No
66	MPP3	1400056 4480411 6770168	3381	0.455	0.5188	No
67	RPL13A	2680519 5700142	3504	0.415	0.5140	No
68	SLC39A7	5570131	3639	0.372	0.5084	No
69	LTBR	2450341	3717	0.346	0.5058	No
70	AMPD2	630093 1170070	3718	0.346	0.5073	No
71	SYT3	6380017	3732	0.342	0.5082	No
72	GTF2H1	2570746 2650148	3831	0.315	0.5042	No
73	CNNM1	2190433	3842	0.312	0.5051	No
74	SIRT1	1190731	4232	0.232	0.4850	No
75	XRN2	130603 1230113 4230309	4471	0.196	0.4730	No
76	ADCY3	2350347 3440242	4479	0.195	0.4735	No
77	NLN	1450576 5870575	4515	0.189	0.4724	No
78	HOXA3	3610632 6020358	4695	0.166	0.4635	No
79	TIAL1	4150048 6510605	4890	0.146	0.4536	No
80	ETV1	70735 2940603 5080463	4979	0.138	0.4494	No
81	SLC26A2	2360278	5027	0.134	0.4475	No
82	ARRDC3	4610390	5168	0.122	0.4404	No
83	SC5DL	6650390	5304	0.113	0.4336	No
84	COL2A1	460446 3940500	5341	0.111	0.4321	No
85	SEMA7A	2630239 5050593	5414	0.106	0.4287	No
86	NXPH1	3870546	5470	0.103	0.4262	No
87	DRD1	430025	5530	0.100	0.4234	No
88	SOCS5	3830398 7100093	5957	0.080	0.4007	No
89	NKX2-3	1990736 6940088	6019	0.078	0.3977	No
90	GPRC5C	1580372	6209	0.071	0.3878	No
91	ADAMTS17	6510739	6270	0.069	0.3848	No
92	POGK	5290315	6276	0.069	0.3849	No
93	CGN	5890139 6370167 6400537	6777	0.053	0.3580	No
94	SLC12A5	1980692	6878	0.051	0.3528	No
95	SYT6	2510280 3850128 4540064	6994	0.048	0.3468	No
96	LIN28	6590672	7153	0.044	0.3384	No
97	DNMT3A	4050068 4810717	7333	0.041	0.3289	No
98	RUNX2	1400193 4230215	7613	0.036	0.3139	No
99	TBX4	3060008	7668	0.034	0.3111	No
100	WEE1	3390070	7693	0.034	0.3099	No
101	PRKCE	5700053	7978	0.029	0.2947	No
102	DNAJB9	460114	8175	0.025	0.2841	No
103	LAP3	2570064	8294	0.023	0.2778	No
104	NPTX1	3710736	8391	0.022	0.2727	No
105	PLA2G4A	6380364	8459	0.021	0.2692	No
106	SNX5	1570021 6860609	8484	0.020	0.2680	No
107	SLC6A15	5290176 6040017	8573	0.019	0.2633	No
108	GRIN2A	6550538	8597	0.019	0.2621	No
109	BMP2K	60541 5570504	8689	0.017	0.2573	No
110	HOXC12	5270411	8966	0.013	0.2423	No
111	FADS3	3120079	9006	0.012	0.2403	No
112	NPM1	4730427	9337	0.007	0.2224	No
113	HS3ST3A1	2230497	9486	0.005	0.2144	No
114	MTHFD1	5900398 6520427	9650	0.003	0.2056	No
115	FLT3	2640487	9828	-0.000	0.1960	No
116	ELOVL4	5220333	9879	-0.001	0.1933	No
117	ABCA1	6290156	9882	-0.001	0.1932	No
118	HPCA	6860010	10123	-0.005	0.1802	No
119	TIMM9	2450484	10266	-0.007	0.1725	No
120	SET	6650286	10418	-0.010	0.1643	No
121	ARX	6900504	10475	-0.010	0.1613	No
122	PAX6	1190025	10551	-0.011	0.1573	No
123	SATB2	2470181	10579	-0.012	0.1559	No
124	TLL1	2680315	10919	-0.017	0.1376	No
125	BMP4	380113	11090	-0.020	0.1285	No
126	CHRM1	4280619	11235	-0.023	0.1208	No
127	FGF14	2630390 3520075 6770048	11483	-0.027	0.1075	No
128	PIGW	4810072	11514	-0.028	0.1060	No
129	LHX9	2350112	11522	-0.028	0.1057	No
130	SNCAIP	4010551	11789	-0.033	0.0914	No
131	FGF11	840292	11852	-0.035	0.0882	No
132	KIAA0427	1690435	12347	-0.046	0.0616	No
133	HOXC13	4070722	12451	-0.049	0.0563	No
134	EIF3S1	6130368 6770044	12508	-0.050	0.0535	No
135	SCFD2	2480504	12723	-0.057	0.0421	No
136	MAX	5220021	13015	-0.066	0.0266	No
137	HHIP	6940438	13205	-0.074	0.0167	No
138	SLC31A2	1450577	13235	-0.075	0.0154	No
139	GRK6	1500053	13365	-0.080	0.0088	No
140	RUSC1	6450093 6980575	13399	-0.082	0.0074	No
141	TDRD1	4230301 6110750	13473	-0.085	0.0038	No
142	SGTB	460170	13480	-0.085	0.0038	No
143	ENPP6	110524 580563	13674	-0.097	-0.0062	No
144	DAZL	4050082	13759	-0.102	-0.0103	No
145	CHST11	6760546	13847	-0.109	-0.0145	No
146	ETV4	2450605	14172	-0.135	-0.0315	No
147	HPCAL4	2600484	14190	-0.137	-0.0318	No
148	LRP8	3610746 5360035	14209	-0.138	-0.0322	No
149	MCM8	6130743	14267	-0.144	-0.0346	No
150	GTF2A1	4120138 4920524 5390110 1230397	14323	-0.149	-0.0369	No
151	GNA13	4590102	14413	-0.158	-0.0411	No
152	RXRB	1780040 5340438	14691	-0.196	-0.0552	No
153	CNOT4	2320242 6760706	14787	-0.215	-0.0594	No
154	HOXA4	940152	15198	-0.321	-0.0802	No
155	ARF6	3520026	15246	-0.339	-0.0813	No
156	EIF4E	1580403 70133 6380215	15331	-0.366	-0.0842	No
157	BCKDHA	50189	15333	-0.367	-0.0826	No
158	ACVR2B	1660546	15498	-0.433	-0.0896	No
159	DAZAP1	5890563	15551	-0.453	-0.0903	No
160	IPO13	3870088	15626	-0.485	-0.0922	No
161	MNT	4920575	15674	-0.510	-0.0925	No
162	CRMP1	4810014	15934	-0.632	-0.1037	No
163	PFN1	6130132	16033	-0.689	-0.1059	No
164	MAT2A	4070026 4730079 6020280	16205	-0.802	-0.1116	No
165	USP2	1190292 1240253 4850035	16232	-0.826	-0.1093	No
166	CLCN2	1940021	16290	-0.869	-0.1086	No
167	RPL19	5550592	16319	-0.890	-0.1061	No
168	SLC20A1	6420014	16371	-0.920	-0.1047	No
169	HSPA4	1050170 3450309	16426	-0.960	-0.1034	No
170	UBE1	4150139 7050463	16518	-1.011	-0.1038	No
171	ANXA6	2190014	16831	-1.281	-0.1150	No
172	FCHSD2	5720092	16847	-1.299	-0.1100	No
173	PDK2	2690017	16873	-1.327	-0.1054	No
174	BCL9L	6940053	17177	-1.682	-0.1144	No
175	TEF	1050050 3120397 4060487	17205	-1.711	-0.1082	No
176	CENTB5	5690128	17336	-1.865	-0.1069	No
177	DIABLO	2360170	17567	-2.261	-0.1093	No
178	MXD4	4810113	17601	-2.318	-0.1007	No
179	EIF5A	1500059 5290022 6370026	17614	-2.334	-0.0909	No
180	BCAS3	4050647	17915	-2.935	-0.0940	No
181	GABARAP	1450286	18089	-3.487	-0.0878	No
182	WBP2	3170128	18235	-4.053	-0.0776	No
183	RORC	1740121	18360	-4.769	-0.0630	No
184	BCL6	940100	18378	-4.903	-0.0420	No
185	HSPBAP1	4060022	18483	-5.895	-0.0213	No
186	PPP1R9B	3130619	18523	-6.362	0.0050	No