Details for gene set V$USF

Table: GSEA Results Summary

Dataset	Set_03_absentNotch_versus_normalThy.phenotype_absentNotch_versus_normalThy.cls #absentNotch_versus_normalThy.phenotype_absentNotch_versus_normalThy.cls #absentNotch_versus_normalThy_repos
Phenotype	phenotype_absentNotch_versus_normalThy.cls#absentNotch_versus_normalThy_repos
Upregulated in class	absentNotch
GeneSet	V$USF_02
Enrichment Score (ES)	0.4484873
Normalized Enrichment Score (NES)	1.254616
Nominal p-value	0.043763675
FDR q-value	0.8707864
FWER p-Value	1.0

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	PFDN2	4230156	44	6.560	0.0330	Yes
2	SNX8	3450315	65	5.832	0.0633	Yes
3	BAX	3830008	75	5.639	0.0932	Yes
4	GRN	4050239	113	5.179	0.1192	Yes
5	EIF4B	5390563 5270577	144	4.909	0.1440	Yes
6	AATF	5220575	212	4.422	0.1642	Yes
7	NUDC	4780025	234	4.307	0.1863	Yes
8	UTP14A	6590048	300	3.970	0.2041	Yes
9	ASNA1	3830041	315	3.931	0.2246	Yes
10	DDX3X	2190020	355	3.736	0.2426	Yes
11	VPS16	430064 3390041 6860301	448	3.424	0.2561	Yes
12	AKAP12	1450739	474	3.321	0.2726	Yes
13	RFC1	1190673	497	3.258	0.2890	Yes
14	PABPC1	2650180 2690253 6020632 1990270	553	3.139	0.3029	Yes
15	CLN3	780368	562	3.127	0.3194	Yes
16	HNRPA1	4670398 5050687	565	3.124	0.3361	Yes
17	MRPL27	2060131	766	2.689	0.3397	Yes
18	CCAR1	3190092	832	2.558	0.3500	Yes
19	TIMM8A	110279	837	2.548	0.3635	Yes
20	UBE4B	780008 3610154	870	2.501	0.3753	Yes
21	SUPV3L1	1170072	910	2.440	0.3863	Yes
22	PER1	3290315	1057	2.234	0.3904	Yes
23	COMMD3	2510259	1097	2.185	0.4001	Yes
24	UMPS	2340541 4730438	1214	2.044	0.4048	Yes
25	OPRS1	6130128 6290717	1219	2.040	0.4156	Yes
26	PTGES2	4210097	1393	1.817	0.4160	Yes
27	GPR65	3120551	1493	1.688	0.4197	Yes
28	ATP6V1C1	2690324 5220528	1548	1.632	0.4256	Yes
29	CDKN2C	5050750 5130148	1569	1.604	0.4332	Yes
30	CD164	3830594	1626	1.561	0.4385	Yes
31	RHEBL1	2810576	1695	1.504	0.4430	Yes
32	PRPS1	6350129	1749	1.447	0.4479	Yes
33	ARPP-19	5700025	1872	1.339	0.4485	Yes
34	TOPORS	4060592	2078	1.160	0.4436	No
35	ATF4	730441 1740195	2208	1.046	0.4423	No
36	TAF6L	1850056	2394	0.972	0.4375	No
37	UBXD3	5050193	2554	0.873	0.4336	No
38	MCAM	5130270 6620577	2633	0.823	0.4338	No
39	H2AFY	4730750	2766	0.736	0.4306	No
40	STC2	4920601	2854	0.691	0.4296	No
41	RPS2	1340647	3005	0.619	0.4248	No
42	ATP6V1A	6590242	3053	0.596	0.4254	No
43	RAI14	770288 1660075	3112	0.565	0.4253	No
44	COPZ1	6940100	3174	0.536	0.4249	No
45	RAB3IL1	380685 5420176	3220	0.517	0.4253	No
46	GPX1	4150093	3255	0.503	0.4261	No
47	NCOA6	1780333 6450110	3317	0.480	0.4254	No
48	PTMA	5570148	3374	0.457	0.4248	No
49	TCERG1	2350551 4540397 5220746	3721	0.345	0.4079	No
50	MDM1	510528 1780280 2680152 2690181 3060025 3120487 4210601 4540037 4610142 5290110 6400433 6480743	3813	0.319	0.4047	No
51	GTF2H1	2570746 2650148	3831	0.315	0.4055	No
52	LAMC2	450692 2680041 4200059 4670148	3956	0.286	0.4003	No
53	ALDH6A1	1770746	4033	0.270	0.3976	No
54	SIRT1	1190731	4232	0.232	0.3882	No
55	DHX35	1230440	4339	0.215	0.3836	No
56	SYNPO2L	5390719	4422	0.202	0.3802	No
57	C4A	360286 3830100 5220750 6420132	4425	0.202	0.3812	No
58	SSR1	5890100	4510	0.190	0.3777	No
59	RAB9A	1690279 3710671	4514	0.189	0.3785	No
60	BLNK	70288 6590092	4809	0.153	0.3634	No
61	ETV1	70735 2940603 5080463	4979	0.138	0.3550	No
62	PPARGC1A	4670040	5446	0.104	0.3303	No
63	PICALM	1940280	5577	0.097	0.3237	No
64	TCF12	3610324 7000156	5640	0.094	0.3209	No
65	SMCR8	730653	5851	0.084	0.3099	No
66	POGK	5290315	6276	0.069	0.2873	No
67	ZIC3	380020	6894	0.051	0.2541	No
68	EIF3S10	1190079 3840176	6952	0.049	0.2513	No
69	PLS3	3290082	7053	0.046	0.2461	No
70	LIN28	6590672	7153	0.044	0.2410	No
71	DNMT3A	4050068 4810717	7333	0.041	0.2315	No
72	PIK3R1	4730671	7432	0.039	0.2264	No
73	HNRPD	4120021	7929	0.029	0.1997	No
74	XPO1	540707	7976	0.029	0.1973	No
75	TYR	5690139	7990	0.028	0.1968	No
76	SEMA3A	1780064	8100	0.026	0.1910	No
77	HNRPH2	2630040 5720671	8119	0.026	0.1902	No
78	FOXD3	6550156	8196	0.025	0.1862	No
79	APLN	6620632	8202	0.025	0.1860	No
80	VLDLR	870722 3060047 5340452 6550131	8322	0.023	0.1797	No
81	NPTX1	3710736	8391	0.022	0.1761	No
82	HOXC5	1580017	8460	0.021	0.1726	No
83	FZD6	360288	8476	0.021	0.1719	No
84	SOX10	6200538	8490	0.020	0.1713	No
85	IRS4	430341 1190450	8523	0.020	0.1696	No
86	SLC17A2	870593 2810035	8564	0.019	0.1676	No
87	CRLF1	3520092	8648	0.018	0.1632	No
88	SLC1A7	1990181	8709	0.017	0.1600	No
89	HOXD10	6100039	8735	0.016	0.1587	No
90	GLA	4610364	8753	0.016	0.1579	No
91	ARMET	5130670	9005	0.012	0.1443	No
92	UBXD2	4280092	9008	0.012	0.1443	No
93	GZMK	1410148	9035	0.011	0.1429	No
94	AP1S2	780279 4280707	9238	0.008	0.1320	No
95	NPM1	4730427	9337	0.007	0.1268	No
96	MTHFD1	5900398 6520427	9650	0.003	0.1099	No
97	CPT1A	6350093	9668	0.002	0.1089	No
98	VNN1	3940400	9823	-0.000	0.1006	No
99	HOXA11	6980133	9947	-0.002	0.0939	No
100	FMR1	5050075	9997	-0.003	0.0913	No
101	BMP6	2100128	10137	-0.005	0.0838	No
102	CLCN5	4200390	10278	-0.007	0.0762	No
103	OMG	6760066	10593	-0.012	0.0593	No
104	TNRC15	6760746	10771	-0.015	0.0497	No
105	RHOQ	520161	11003	-0.019	0.0373	No
106	NEUROD1	3060619	11111	-0.021	0.0316	No
107	TOM1L2	4810465	11232	-0.023	0.0252	No
108	LHFP	3440368	11268	-0.024	0.0235	No
109	TESK2	6520524	11382	-0.026	0.0175	No
110	FGF14	2630390 3520075 6770048	11483	-0.027	0.0122	No
111	TGFB2	4920292	11759	-0.033	-0.0025	No
112	BDNF	2940128 3520368	11802	-0.034	-0.0046	No
113	CARKL	6020068	11960	-0.037	-0.0129	No
114	RNF128	1230300 5670273	12190	-0.043	-0.0251	No
115	PFKFB1	2370128	12210	-0.043	-0.0259	No
116	CAPN6	1740168	12469	-0.049	-0.0397	No
117	SUMF1	730050	12590	-0.053	-0.0459	No
118	HOXB5	2900538	12623	-0.054	-0.0473	No
119	CREB5	2320368	12691	-0.056	-0.0507	No
120	GGN	1410528 4210082 5290170	12732	-0.057	-0.0525	No
121	SEC23IP	4540484 6200047	12931	-0.063	-0.0629	No
122	KCNE4	2470102	12963	-0.065	-0.0643	No
123	MAX	5220021	13015	-0.066	-0.0667	No
124	CALR	510446	13085	-0.069	-0.0700	No
125	SLC31A2	1450577	13235	-0.075	-0.0777	No
126	CBX5	3830072 6290167	13495	-0.086	-0.0913	No
127	DUSP8	6650039	13541	-0.090	-0.0933	No
128	TAC1	7000195 380706	13761	-0.102	-0.1046	No
129	ELAVL3	2850014	13765	-0.102	-0.1042	No
130	UBE2B	4780497	13803	-0.105	-0.1056	No
131	LRP5	2100397 3170484	13839	-0.108	-0.1069	No
132	NRIP3	1340372	14161	-0.134	-0.1236	No
133	GTF2A1	4120138 4920524 5390110 1230397	14323	-0.149	-0.1316	No
134	DUSP7	2940309	14406	-0.157	-0.1352	No
135	NFX1	450504	14620	-0.186	-0.1457	No
136	RPS28	3830221	14941	-0.248	-0.1617	No
137	ILF3	940722 3190647 6520110	15016	-0.268	-0.1643	No
138	CYR61	1240408 5290026 4120452 6550008	15080	-0.286	-0.1662	No
139	BTBD14B	3520601 4280162	15153	-0.306	-0.1684	No
140	HOXB7	4540706 4610358	15205	-0.323	-0.1695	No
141	DVL2	6110162	15325	-0.365	-0.1739	No
142	EIF4E	1580403 70133 6380215	15331	-0.366	-0.1722	No
143	NDUFA7	5900722	15414	-0.396	-0.1746	No
144	STK16	1740154	15428	-0.402	-0.1731	No
145	EGLN2	540086	15438	-0.407	-0.1714	No
146	MTCH2	3780603 6620215	15458	-0.418	-0.1702	No
147	SLC39A5	2900100 4610440	15476	-0.423	-0.1688	No
148	LAMA3	1190131 5290239	15511	-0.437	-0.1683	No
149	DCTN4	3390010 5550170	15512	-0.437	-0.1659	No
150	GNB2	2350053	15595	-0.470	-0.1679	No
151	TOP3A	7000435	15691	-0.517	-0.1702	No
152	HIVEP1	3850632	15928	-0.631	-0.1796	No
153	SLC12A6	610278 1980035 5340671	15937	-0.634	-0.1766	No
154	COQ4	1660551	16009	-0.678	-0.1768	No
155	MAT2A	4070026 4730079 6020280	16205	-0.802	-0.1831	No
156	SESN3	110687	16345	-0.907	-0.1857	No
157	UROD	2470494	16563	-1.036	-0.1919	No
158	EPC1	1570050 5290095 6900193	16571	-1.040	-0.1867	No
159	FEN1	1770541	16647	-1.102	-0.1848	No
160	CHD4	5420059 6130338 6380717	16744	-1.194	-0.1836	No
161	MAP4K1	4060692	16760	-1.214	-0.1779	No
162	UBE2L6	60048 1170687	16772	-1.228	-0.1718	No
163	COMMD8	5890358	16835	-1.285	-0.1683	No
164	DUSP1	6860121	16878	-1.331	-0.1634	No
165	ATF7IP	2690176 6770021	16981	-1.427	-0.1612	No
166	PPM1A	1170301 5900273	17014	-1.465	-0.1551	No
167	SLC23A2	6660722	17195	-1.700	-0.1556	No
168	RUNX1	3840711	17468	-2.087	-0.1591	No
169	DDIT3	780373	17608	-2.325	-0.1542	No
170	SQSTM1	6550056	17609	-2.328	-0.1416	No
171	CTNS	4480048	17796	-2.683	-0.1372	No
172	BRDT	3940102	17940	-2.994	-0.1288	No
173	DNAJB5	2900215	17957	-3.044	-0.1133	No
174	KBTBD2	2320014	17988	-3.150	-0.0979	No
175	GABARAP	1450286	18089	-3.487	-0.0846	No
176	NIT1	1230338 3940671	18256	-4.174	-0.0711	No
177	PIP5K1A	4560672	18356	-4.744	-0.0509	No
178	ZFYVE26	6860152	18368	-4.851	-0.0253	No
179	ISGF3G	3190131 7100142	18568	-7.181	0.0026	No