Details for gene set V$NFKB

Table: GSEA Results Summary

Dataset	Set_03_absentNotch_versus_normalThy.phenotype_absentNotch_versus_normalThy.cls #absentNotch_versus_normalThy.phenotype_absentNotch_versus_normalThy.cls #absentNotch_versus_normalThy_repos
Phenotype	phenotype_absentNotch_versus_normalThy.cls#absentNotch_versus_normalThy_repos
Upregulated in class	normalThy
GeneSet	V$NFKB_C
Enrichment Score (ES)	-0.5904009
Normalized Enrichment Score (NES)	-1.6397346
Nominal p-value	0.0
FDR q-value	0.14246717
FWER p-Value	0.168

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	PCBP4	6350722	270	4.138	0.0074	No
2	TCEA2	6370546	518	3.213	0.0112	No
3	NFKBIB	2260167	687	2.854	0.0173	No
4	BMF	610102	745	2.730	0.0288	No
5	ARHGAP8	380333 5390487	853	2.517	0.0364	No
6	VCAM1	2900450	1226	2.029	0.0271	No
7	PRKCD	770592	1385	1.829	0.0283	No
8	CDC37	2570537	1463	1.724	0.0333	No
9	AMOTL1	380279	1502	1.678	0.0402	No
10	BHLHB2	7040603	1527	1.650	0.0477	No
11	ENO3	5270136	1602	1.577	0.0521	No
12	SMARCAD1	5390619	1756	1.440	0.0515	No
13	RAD18	5670372	1808	1.391	0.0561	No
14	LASP1	1690528 2190341 6420341	1967	1.247	0.0542	No
15	SEC14L2	2640370	2037	1.191	0.0568	No
16	CYLD	6590079	2137	1.107	0.0574	No
17	NDRG2	450403	2230	1.033	0.0579	No
18	SNX15	1240348 6770082	2400	0.970	0.0539	No
19	TYRO3	3130193	2436	0.948	0.0571	No
20	ANP32A	510044 1580095 2680037	2763	0.738	0.0433	No
21	LAMB3	7100301	2890	0.676	0.0401	No
22	BCKDK	1940601 3990600	2951	0.649	0.0403	No
23	ZADH2	520438	2984	0.626	0.0419	No
24	CDC14A	4050132	3165	0.538	0.0350	No
25	IL27RA	940093	3218	0.518	0.0349	No
26	WRN	540687 1240093	3398	0.449	0.0276	No
27	EGR3	6940128	3667	0.363	0.0150	No
28	RAP2C	1690132	3675	0.360	0.0166	No
29	ASH1L	2510402 5360687 6650685	4018	0.274	-0.0005	No
30	CDK6	4920253	4019	0.273	0.0009	No
31	GPHN	3290195 3840121	4117	0.252	-0.0030	No
32	TNFSF18	1990458 2850520	4193	0.237	-0.0058	No
33	EGF	5220154	4215	0.234	-0.0057	No
34	CLCN1	840161	4346	0.214	-0.0116	No
35	SESN2	2370019	4638	0.173	-0.0265	No
36	LRRFIP2	670575 730152 6590438	4662	0.171	-0.0268	No
37	CTGF	4540577	4683	0.168	-0.0270	No
38	NFAT5	2510411 5890195 6550152	4702	0.165	-0.0271	No
39	SNAP25	360520	4856	0.149	-0.0346	No
40	FTHL17	6550193	4900	0.144	-0.0362	No
41	BAI2	380632 630113 6650170	4945	0.141	-0.0378	No
42	PLA1A	4590040 6100204	4969	0.139	-0.0383	No
43	TRIM47	5080717	4971	0.138	-0.0376	No
44	PPP3CA	4760332 6760092	5002	0.136	-0.0385	No
45	SLC6A12	3170685	5152	0.123	-0.0459	No
46	GRK5	1940348 4670053	5226	0.118	-0.0493	No
47	IL13	7040021	5348	0.110	-0.0552	No
48	BCL3	3990440	5360	0.110	-0.0553	No
49	IFNB1	1400142	5467	0.103	-0.0605	No
50	HSD3B7	1410129	5529	0.100	-0.0632	No
51	DAP3	1660528 2120039 5420593	5537	0.099	-0.0631	No
52	RALGDS	430463	5823	0.085	-0.0781	No
53	PTGS2	2510301 3170369	6240	0.070	-0.1003	No
54	SIRT2	630494	6263	0.069	-0.1011	No
55	MLLT6	3870168	6273	0.069	-0.1012	No
56	PTGES	1690075	6418	0.064	-0.1087	No
57	SMPD3	520164	6443	0.064	-0.1097	No
58	EFNA3	6370390	6654	0.057	-0.1208	No
59	DACH2	460605 1500253	6775	0.053	-0.1270	No
60	PHF6	3120632 3990041	6828	0.052	-0.1295	No
61	ECT2	3830086	6972	0.048	-0.1370	No
62	RIN2	2450184	7078	0.046	-0.1425	No
63	LIN28	6590672	7153	0.044	-0.1463	No
64	DNAJA1	1660010 2320358 6840136	7463	0.039	-0.1628	No
65	PTPRJ	4010707	7521	0.037	-0.1657	No
66	MAP3K13	3190017	7591	0.036	-0.1693	No
67	IL2	1770725	8133	0.026	-0.1985	No
68	FOXD3	6550156	8196	0.025	-0.2017	No
69	CUEDC1	1660463	8292	0.023	-0.2067	No
70	SOX10	6200538	8490	0.020	-0.2173	No
71	SOX3	4570537	8772	0.016	-0.2325	No
72	FGF17	3130022	8847	0.014	-0.2364	No
73	IL1A	3610056	8909	0.014	-0.2397	No
74	MSX1	2650309	8971	0.012	-0.2429	No
75	TNFSF15	360341	9124	0.010	-0.2511	No
76	VNN3	730053 4610609	9252	0.008	-0.2579	No
77	GNAO1	2510292 6590487	9288	0.008	-0.2598	No
78	TNR	1340541	9340	0.007	-0.2625	No
79	CXCL10	2450408	9426	0.006	-0.2671	No
80	IER5	2350575	9837	-0.001	-0.2894	No
81	IL27	1990324	9887	-0.001	-0.2920	No
82	HOXA11	6980133	9947	-0.002	-0.2952	No
83	ARHGAP5	2510619 3360035	9991	-0.003	-0.2975	No
84	HOXB6	4210739	10098	-0.005	-0.3032	No
85	IL1RN	2370333	10145	-0.005	-0.3057	No
86	RND1	5080300	10181	-0.006	-0.3076	No
87	WNT10A	2100706	10190	-0.006	-0.3080	No
88	GABPB2	6130450 7050735	10310	-0.008	-0.3144	No
89	PTHLH	5290739	10688	-0.013	-0.3348	No
90	EHF	4560088	10721	-0.014	-0.3364	No
91	RAB10	2360008 5890020	10753	-0.015	-0.3380	No
92	JPH3	780397	10766	-0.015	-0.3386	No
93	MOBKL2C	2640088 3830017	10966	-0.018	-0.3493	No
94	NUP153	7000452	11304	-0.024	-0.3675	No
95	ALG6	4060131	11675	-0.031	-0.3874	No
96	LYPLA2	1500112	11697	-0.032	-0.3884	No
97	BDNF	2940128 3520368	11802	-0.034	-0.3938	No
98	GNG4	2630600	11989	-0.038	-0.4037	No
99	CCL22	6380086	11991	-0.038	-0.4036	No
100	UBE2I	2680056 6350446	12095	-0.041	-0.4089	No
101	HOXB9	2640687	12334	-0.046	-0.4216	No
102	PAPPA	4230463	12362	-0.047	-0.4228	No
103	C1QL1	2030465	12473	-0.050	-0.4285	No
104	TSNAXIP1	1770270 6180577	12501	-0.050	-0.4297	No
105	SEMA3B	5570563	12573	-0.052	-0.4333	No
106	IL23A	6290044	12734	-0.057	-0.4417	No
107	FGF1	4780435 5670601	12765	-0.058	-0.4430	No
108	DCAMKL1	540095 2690092	12830	-0.060	-0.4461	No
109	STAT6	1190010 5720019	12978	-0.065	-0.4538	No
110	SOX5	2370576 2900167 3190128 5050528	13267	-0.076	-0.4690	No
111	GATA4	1410215 2690609	13425	-0.083	-0.4771	No
112	ARPC5	1740411 3450300	13646	-0.096	-0.4885	No
113	MAG	2370037	13650	-0.096	-0.4881	No
114	SP6	60484 510452 2690333	13741	-0.101	-0.4925	No
115	COL11A2	5130341	13822	-0.107	-0.4962	No
116	TSLP	730408 1990500	13858	-0.110	-0.4976	No
117	FOS	1850315	14050	-0.124	-0.5073	No
118	SLC34A3	2230242	14234	-0.141	-0.5164	No
119	RGL1	1500097 6900450	14239	-0.141	-0.5159	No
120	GRIN2D	6620372	14265	-0.144	-0.5165	No
121	FOXA3	2680121	14278	-0.145	-0.5164	No
122	PCSK2	360017 430528 5900619	14291	-0.146	-0.5162	No
123	ASCL3	4570484	14295	-0.146	-0.5156	No
124	DUSP22	4280010 5550546	14400	-0.157	-0.5204	No
125	SIN3A	2190121	14411	-0.157	-0.5201	No
126	GNA13	4590102	14413	-0.158	-0.5193	No
127	LCAT	6400441	14446	-0.161	-0.5202	No
128	CDH5	5340487	14614	-0.185	-0.5283	No
129	PIGC	5690377	14659	-0.191	-0.5297	No
130	DDR1	2060044 5220180	14663	-0.192	-0.5288	No
131	BLR1	1500300 5420017	14702	-0.198	-0.5298	No
132	PPP2R5E	70671 2120056	14716	-0.200	-0.5295	No
133	ITGB4	1740021 3840482	14739	-0.205	-0.5296	No
134	PPP1R13B	4010605 4760181	14979	-0.259	-0.5411	No
135	SLAMF8	1230048	15077	-0.284	-0.5449	No
136	FUT7	2900736	15118	-0.296	-0.5455	No
137	JAK3	70347 3290008	15141	-0.301	-0.5451	No
138	NLK	2030010 2450041	15237	-0.333	-0.5484	No
139	MSC	5080139	15253	-0.341	-0.5474	No
140	CHX10	3830184	15327	-0.365	-0.5494	No
141	GADD45B	2350408	15364	-0.376	-0.5494	No
142	IL18R1	270546	15526	-0.442	-0.5558	No
143	FOXD2	4210035	15585	-0.467	-0.5564	No
144	TAL1	7040239	15617	-0.479	-0.5555	No
145	MNT	4920575	15674	-0.510	-0.5559	No
146	MAP3K8	2940286	15987	-0.666	-0.5692	No
147	PFN1	6130132	16033	-0.689	-0.5680	No
148	EDG5	2640300	16299	-0.875	-0.5777	No
149	TOP1	770471 4060632 6650324	16388	-0.933	-0.5775	No
150	CGGBP1	4810053	16516	-1.010	-0.5790	No
151	ARHGEF2	3360577	16580	-1.046	-0.5768	No
152	FLI1	3990142	16600	-1.061	-0.5722	No
153	CHD4	5420059 6130338 6380717	16744	-1.194	-0.5736	No
154	ZHX2	2900452	17055	-1.511	-0.5823	Yes
155	IRF1	2340152 3450592 6290121 6980577	17156	-1.653	-0.5789	Yes
156	RHOA	580142 5900131 5340450	17225	-1.731	-0.5734	Yes
157	PURG	1190593	17262	-1.785	-0.5658	Yes
158	BCL2L1	1580452 4200152 5420484	17267	-1.792	-0.5565	Yes
159	SOCS2	4760692	17316	-1.839	-0.5492	Yes
160	NFKBIA	1570152	17332	-1.860	-0.5401	Yes
161	CENTB5	5690128	17336	-1.865	-0.5303	Yes
162	BCL11A	6860369	17349	-1.884	-0.5209	Yes
163	EIF5A	1500059 5290022 6370026	17614	-2.334	-0.5228	Yes
164	NFKB2	2320670	17622	-2.349	-0.5106	Yes
165	ICAM1	6980138	17701	-2.507	-0.5015	Yes
166	TRIB2	4120605	17714	-2.527	-0.4886	Yes
167	UACA	1190725	17830	-2.771	-0.4801	Yes
168	HCFC1	2260008	17838	-2.780	-0.4656	Yes
169	FOXJ2	2450441	17877	-2.870	-0.4524	Yes
170	XPO6	3940019	17891	-2.889	-0.4377	Yes
171	RHOG	6760575	17892	-2.890	-0.4222	Yes
172	LCN2	2510112	17907	-2.924	-0.4074	Yes
173	IL4I1	3190161	18064	-3.382	-0.3978	Yes
174	TCTA	2680687	18070	-3.421	-0.3798	Yes
175	IL2RA	6620450	18109	-3.560	-0.3629	Yes
176	MRPS6	870164	18143	-3.677	-0.3450	Yes
177	RANBP10	2340184	18203	-3.900	-0.3274	Yes
178	TAZ	7100193	18300	-4.463	-0.3088	Yes
179	RORC	1740121	18360	-4.769	-0.2865	Yes
180	USP52	3710215 6380133	18364	-4.798	-0.2611	Yes
181	EPHB6	5860128	18449	-5.553	-0.2360	Yes
182	EGR2	3800403	18471	-5.748	-0.2065	Yes
183	LTB	3990672	18503	-6.099	-0.1756	Yes
184	CCL5	3710397	18577	-7.590	-0.1390	Yes
185	SMOC1	840039	18592	-8.434	-0.0948	Yes
186	S100A10	6350010	18596	-8.500	-0.0495	Yes
187	TNIP1	2510279 5900041 6510435	18615	-9.474	0.0001	Yes