Details for gene set V$ER_Q6

Table: GSEA Results Summary

Dataset	Set_03_absentNotch_versus_normalThy.phenotype_absentNotch_versus_normalThy.cls #absentNotch_versus_normalThy.phenotype_absentNotch_versus_normalThy.cls #absentNotch_versus_normalThy_repos
Phenotype	phenotype_absentNotch_versus_normalThy.cls#absentNotch_versus_normalThy_repos
Upregulated in class	absentNotch
GeneSet	V$ER_Q6_01
Enrichment Score (ES)	0.43419102
Normalized Enrichment Score (NES)	1.2166542
Nominal p-value	0.06638116
FDR q-value	1.0
FWER p-Value	1.0

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	EIF2B3	3290463	89	5.435	0.0297	Yes
2	SLC6A9	2470520	108	5.216	0.0618	Yes
3	ATP5G1	5290019	171	4.688	0.0882	Yes
4	HSPG2	2510687 6220750	262	4.167	0.1098	Yes
5	PCBP4	6350722	270	4.138	0.1357	Yes
6	ALDOA	6290672	348	3.761	0.1554	Yes
7	FKBP4	870035	434	3.492	0.1729	Yes
8	SDC1	3440471 6350408	533	3.182	0.1878	Yes
9	RRBP1	2260477 5050440	555	3.137	0.2066	Yes
10	PHF5A	2690519	652	2.899	0.2198	Yes
11	NR1D1	2360471 770746 6590204	825	2.570	0.2268	Yes
12	PPP1R16A	5080239	852	2.518	0.2413	Yes
13	POLE3	5270019	882	2.480	0.2555	Yes
14	ACO2	4230600	888	2.467	0.2709	Yes
15	GREB1	1230707 4560056	1051	2.237	0.2763	Yes
16	GTPBP1	2230541 4560528	1249	1.997	0.2783	Yes
17	TOMM40	6110017	1256	1.984	0.2906	Yes
18	SLC25A1	4050402	1330	1.902	0.2987	Yes
19	B3GNT6	1340736	1357	1.869	0.3091	Yes
20	MT2A	6860286	1412	1.785	0.3175	Yes
21	STMN1	1990717	1415	1.783	0.3287	Yes
22	DGCR8	3450632	1473	1.717	0.3366	Yes
23	NFIL3	4070377	1531	1.647	0.3439	Yes
24	CDKN2C	5050750 5130148	1569	1.604	0.3521	Yes
25	ZFPM1	6760093	1617	1.566	0.3595	Yes
26	TCF7	3800736 5390181	1628	1.557	0.3688	Yes
27	RHOB	1500309	1703	1.496	0.3743	Yes
28	CKB	4560632	1843	1.370	0.3755	Yes
29	SRP68	4480731	2002	1.212	0.3746	Yes
30	RNMT	1770500	2022	1.199	0.3812	Yes
31	LRFN4	5670368	2043	1.187	0.3876	Yes
32	TRPS1	870100	2081	1.158	0.3930	Yes
33	GNB1L	3840368 5270215	2218	1.038	0.3922	Yes
34	NDRG2	450403	2230	1.033	0.3981	Yes
35	PSMF1	5340056	2249	1.027	0.4037	Yes
36	SLC16A6	1690156	2278	1.015	0.4086	Yes
37	SYNJ2BP	4150672 6770706	2352	0.995	0.4110	Yes
38	RTN4	50725 630647 870097 870184	2392	0.973	0.4150	Yes
39	HIP2	2810095 3990369 4120301	2416	0.961	0.4199	Yes
40	TBX6	4730139 6840647	2460	0.935	0.4235	Yes
41	ATP5A1	1990722	2697	0.778	0.4156	Yes
42	PDHA1	5550397	2709	0.771	0.4199	Yes
43	PDE6D	3130537 3390014	2737	0.755	0.4232	Yes
44	BNIP3L	1940347	2743	0.751	0.4277	Yes
45	AAMP	2640059	2777	0.731	0.4306	Yes
46	RBMS1	6400014	2796	0.721	0.4342	Yes
47	PKP4	3710400 5890097	3132	0.554	0.4195	No
48	CDC14A	4050132	3165	0.538	0.4212	No
49	NR4A2	60273	3183	0.532	0.4237	No
50	ZFP36L2	510180	3253	0.506	0.4231	No
51	SLC4A7	2370056	3517	0.412	0.4115	No
52	RAP2C	1690132	3675	0.360	0.4053	No
53	PDZK1	2320128	3738	0.340	0.4041	No
54	SLC25A5	1980672	3761	0.331	0.4050	No
55	APBA2BP	5700341	3811	0.321	0.4043	No
56	BRMS1	6860280	3877	0.304	0.4027	No
57	MRVI1	4810338 4850601 5900441	4035	0.269	0.3959	No
58	SPOCK2	6650369	4374	0.209	0.3789	No
59	TLX2	1090128 2900451	4431	0.201	0.3772	No
60	LCP1	4280397	4691	0.166	0.3642	No
61	HOXA3	3610632 6020358	4695	0.166	0.3651	No
62	NOG	2320609	4770	0.157	0.3621	No
63	GCM1	6510687	4912	0.144	0.3553	No
64	ERG	50154 1770739	4972	0.138	0.3530	No
65	MCC	620750	5001	0.136	0.3523	No
66	FGF9	1050195	5498	0.101	0.3261	No
67	GPR3	2970452	5590	0.097	0.3218	No
68	TINAG	1570609 6510215	5708	0.090	0.3160	No
69	OTP	2630070	5748	0.089	0.3144	No
70	MAP2K7	2260086	5956	0.081	0.3037	No
71	KIRREL3	2630195	6140	0.074	0.2943	No
72	CNTN4	1780300 5570577 6370019	6305	0.068	0.2858	No
73	ZIC1	670113	6317	0.068	0.2856	No
74	STARD6	6940541	6367	0.066	0.2834	No
75	ESRRB	3870082	6427	0.064	0.2806	No
76	TLX3	510619	6591	0.059	0.2721	No
77	TSGA14	6660465	6687	0.056	0.2673	No
78	GRID2	2680242	6700	0.056	0.2670	No
79	PDE1A	1050458 2570563	6728	0.055	0.2659	No
80	DCX	130075 5360025 7050673	6732	0.055	0.2661	No
81	BHLHB5	6510520	6867	0.051	0.2592	No
82	PFTK1	1780181	6873	0.051	0.2592	No
83	UBE2R2	1230504	6948	0.049	0.2555	No
84	TBR1	5130053	6949	0.049	0.2558	No
85	PTHR1	2640711 3360647	7230	0.043	0.2409	No
86	FIGN	7000601	7255	0.043	0.2399	No
87	NKX2-2	4150731	7312	0.042	0.2371	No
88	EGFL9	1410091	7315	0.042	0.2373	No
89	DNMT3A	4050068 4810717	7333	0.041	0.2366	No
90	GFAP	2060092	7354	0.041	0.2358	No
91	WNT3	2360685	7618	0.035	0.2217	No
92	GNAI1	4560390	7724	0.033	0.2162	No
93	FBXL14	4670315	7964	0.029	0.2035	No
94	SRPK2	6380341	7985	0.028	0.2026	No
95	ONECUT2	1340008	7998	0.028	0.2021	No
96	HOXA10	6110397 7100458	8232	0.024	0.1896	No
97	WNT11	1230278	8240	0.024	0.1894	No
98	CALD1	1770129 1940397	8361	0.022	0.1830	No
99	PGF	4810593	8475	0.021	0.1770	No
100	SLC10A2	110537	8720	0.017	0.1639	No
101	PCDH8	2360047 4200452	8827	0.015	0.1582	No
102	TBC1D15	870673	8853	0.014	0.1570	No
103	MID1	4070114 4760458	8880	0.014	0.1556	No
104	APEX2	3780044	9074	0.011	0.1452	No
105	ATP6V0A4	360100	9352	0.007	0.1303	No
106	PAK1IP1	2230438	9764	0.001	0.1080	No
107	PURA	3870156	9881	-0.001	0.1017	No
108	HOXB3	520292	9890	-0.001	0.1013	No
109	RIMS4	6110500	10394	-0.009	0.0740	No
110	PXN	3290048 6400132	10672	-0.013	0.0591	No
111	ERBB4	4610400 4810017	10737	-0.014	0.0557	No
112	FSHB	7100592	10777	-0.015	0.0537	No
113	HIPK2	6350647	10984	-0.018	0.0426	No
114	B3GALT2	430136	11083	-0.020	0.0375	No
115	OTX2	1190471	11239	-0.023	0.0292	No
116	LIFR	3360068 3830102	11318	-0.024	0.0251	No
117	PPARA	2060026	11553	-0.029	0.0126	No
118	SPRED1	6940706	11559	-0.029	0.0125	No
119	S100A5	4120592	11610	-0.030	0.0100	No
120	PAM	5290528	11665	-0.031	0.0073	No
121	MITF	380056	11690	-0.031	0.0062	No
122	PRDM1	3170347 3520301	12003	-0.038	-0.0105	No
123	TREX2	4920707	12076	-0.040	-0.0142	No
124	HOXB9	2640687	12334	-0.046	-0.0278	No
125	CHRDL1	1580037 6380204	12513	-0.050	-0.0371	No
126	SHH	5570400	12546	-0.051	-0.0386	No
127	SCNN1A	4730019	12595	-0.053	-0.0408	No
128	GNRHR	130438	12678	-0.055	-0.0449	No
129	CREB5	2320368	12691	-0.056	-0.0452	No
130	IL23R	3990014	12710	-0.056	-0.0458	No
131	POU3F3	6400047	12758	-0.058	-0.0480	No
132	COVA1	5340504 5360594	12793	-0.059	-0.0495	No
133	GLRA2	7000019	12826	-0.060	-0.0508	No
134	ISL1	4810239	12915	-0.063	-0.0552	No
135	LRRN3	1450133	12923	-0.063	-0.0552	No
136	CDKL5	2450070	13048	-0.067	-0.0615	No
137	ERN1	2360403	13106	-0.070	-0.0641	No
138	RBBP9	2480139	13356	-0.080	-0.0771	No
139	GRM8	4780082	13511	-0.087	-0.0849	No
140	GAS7	2120358 6450494	13563	-0.091	-0.0871	No
141	SP6	60484 510452 2690333	13741	-0.101	-0.0961	No
142	JARID2	6290538	13824	-0.107	-0.0998	No
143	LRP5	2100397 3170484	13839	-0.108	-0.0999	No
144	BTBD3	1980041 2510577 3190053 4200746	13848	-0.109	-0.0997	No
145	LRRN1	3290154	13857	-0.110	-0.0994	No
146	RAB11FIP1	2470333	14246	-0.142	-0.1195	No
147	CLDN12	6350341	14306	-0.148	-0.1218	No
148	FBXW7	4210338 7050280	14316	-0.148	-0.1214	No
149	GNA13	4590102	14413	-0.158	-0.1256	No
150	NNT	540253 1170471 5550092 6760397	14542	-0.172	-0.1314	No
151	DDR1	2060044 5220180	14663	-0.192	-0.1367	No
152	TPM3	670600 3170296 5670167 6650471	14667	-0.192	-0.1357	No
153	COPZ2	1780010 2360020 4070373	14690	-0.196	-0.1356	No
154	AOC2	520348 3120008	14760	-0.209	-0.1380	No
155	HOXB7	4540706 4610358	15205	-0.323	-0.1600	No
156	EIF4E	1580403 70133 6380215	15331	-0.366	-0.1645	No
157	MNT	4920575	15674	-0.510	-0.1798	No
158	GABARAPL2	610204 3360047	15967	-0.654	-0.1915	No
159	CAMKK2	5270047	16092	-0.723	-0.1936	No
160	ZIC4	1500082	16172	-0.777	-0.1930	No
161	NDUFB3	4610687	16211	-0.809	-0.1899	No
162	DNAJA2	2630253 6860358	16312	-0.885	-0.1897	No
163	DTNB	2850100	16325	-0.895	-0.1847	No
164	KCNN3	6520600 6420138	16556	-1.032	-0.1906	No
165	FCHSD2	5720092	16847	-1.299	-0.1981	No
166	SLC9A1	2650093	16874	-1.327	-0.1911	No
167	CHD2	4070039	17182	-1.689	-0.1970	No
168	FGF13	630575 1570440 5360121	17192	-1.699	-0.1867	No
169	IMMT	870450 4280438	17227	-1.732	-0.1776	No
170	MAP2K6	1230056 2940204	17557	-2.234	-0.1812	No
171	MAGED1	6650332	17564	-2.250	-0.1673	No
172	PHF12	870400 3130687	17759	-2.611	-0.1612	No
173	UHRF2	60050 840280 1340746 5080091	17853	-2.807	-0.1484	No
174	EIF2AK3	4280161	17993	-3.174	-0.1358	No
175	COX7A2L	1500142	18217	-3.972	-0.1227	No
176	CD37	770273	18246	-4.132	-0.0980	No
177	SATB1	5670154	18264	-4.200	-0.0722	No
178	MAP1LC3A	840519 5570605	18351	-4.713	-0.0470	No
179	CIC	6370161	18357	-4.746	-0.0171	No
180	BCL6	940100	18378	-4.903	0.0129	No