Details for gene set V$E2F

Table: GSEA Results Summary

Dataset	Set_03_absentNotch_versus_normalThy.phenotype_absentNotch_versus_normalThy.cls #absentNotch_versus_normalThy.phenotype_absentNotch_versus_normalThy.cls #absentNotch_versus_normalThy_repos
Phenotype	phenotype_absentNotch_versus_normalThy.cls#absentNotch_versus_normalThy_repos
Upregulated in class	absentNotch
GeneSet	V$E2F_Q3
Enrichment Score (ES)	0.49429563
Normalized Enrichment Score (NES)	1.3512651
Nominal p-value	0.018828452
FDR q-value	0.57933146
FWER p-Value	0.999

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	SHMT1	5900132	112	5.195	0.0318	Yes
2	TFRC	4050551	213	4.421	0.0587	Yes
3	IMPDH2	5220138	294	4.012	0.0836	Yes
4	RFC1	1190673	497	3.258	0.0965	Yes
5	UNG	3130110 6100364	564	3.124	0.1157	Yes
6	HNRPA1	4670398 5050687	565	3.124	0.1385	Yes
7	RBBP7	430113 450450 2370309	566	3.123	0.1613	Yes
8	SLC25A3	670112	631	2.954	0.1794	Yes
9	LIG1	1980438 4540112 5570609	654	2.897	0.1993	Yes
10	E2F1	5360093	847	2.525	0.2073	Yes
11	NCL	2360463 4540279	893	2.461	0.2229	Yes
12	MCM3	5570068	925	2.409	0.2388	Yes
13	ABCF2	630040 3140035 6450601	979	2.325	0.2528	Yes
14	NASP	2260139 2940369 5130707	1015	2.282	0.2676	Yes
15	PPP1R8	6290292	1024	2.270	0.2837	Yes
16	MCM4	2760673 5420711	1104	2.179	0.2953	Yes
17	SLC38A1	520465	1224	2.031	0.3037	Yes
18	GCH1	670364 6550358	1233	2.020	0.3180	Yes
19	PIAS1	5340301	1323	1.909	0.3271	Yes
20	MCM6	60092 540181 6510110	1326	1.907	0.3409	Yes
21	OLFML3	7100463	1369	1.850	0.3522	Yes
22	AP4M1	70609 3440128	1375	1.841	0.3653	Yes
23	STMN1	1990717	1415	1.783	0.3762	Yes
24	HMGN2	3140091	1422	1.774	0.3888	Yes
25	APRIN	2810050	1515	1.662	0.3960	Yes
26	POLA2	940519	1657	1.535	0.3996	Yes
27	RBBP4	6650528	1683	1.518	0.4093	Yes
28	PRPS1	6350129	1749	1.447	0.4163	Yes
29	CDC25A	3800184	1784	1.416	0.4248	Yes
30	TCP1	2450100 5130524	1856	1.357	0.4309	Yes
31	ZCCHC8	2260332 2350487	1875	1.335	0.4396	Yes
32	HIST1H2BK	6130433	1965	1.250	0.4439	Yes
33	LASP1	1690528 2190341 6420341	1967	1.247	0.4530	Yes
34	DNAJC11	360465 3390215	2110	1.132	0.4536	Yes
35	KPNB1	1690138	2147	1.097	0.4596	Yes
36	DLST	2320722	2187	1.062	0.4652	Yes
37	CDCA7	3060097	2203	1.051	0.4721	Yes
38	SFRS2	50707 380593	2242	1.028	0.4775	Yes
39	CDC6	4570296 5360600	2290	1.012	0.4824	Yes
40	MCM2	5050139	2398	0.971	0.4837	Yes
41	TBX6	4730139 6840647	2460	0.935	0.4872	Yes
42	BAT3	1990594	2530	0.884	0.4899	Yes
43	MCM7	3290292 5220056	2567	0.868	0.4943	Yes
44	GMNN	2630148	2690	0.783	0.4934	No
45	KCNA1	2030594	2898	0.672	0.4871	No
46	PHF15	6550066 6860673	2930	0.658	0.4902	No
47	MRPL18	6560341	3113	0.564	0.4845	No
48	H2AFZ	1470168	3180	0.533	0.4848	No
49	ADAMTS2	2650025 6370133 6840670	3185	0.531	0.4885	No
50	EPHB2	1090288 1410377 2100541	3425	0.440	0.4787	No
51	KLF4	1850022 3830239 5570750	3574	0.389	0.4736	No
52	SSBP3	870717 1050377 7040551	3708	0.350	0.4689	No
53	E2F3	50162 460180	3726	0.343	0.4705	No
54	PRKDC	1400072 4230541	3789	0.325	0.4695	No
55	CNOT3	130519 4480292 1990609	4177	0.240	0.4503	No
56	SNPH	2680484	4187	0.239	0.4516	No
57	PAQR4	730736	4223	0.232	0.4514	No
58	UFD1L	870020	4242	0.231	0.4521	No
59	TBX3	2570672	4401	0.204	0.4450	No
60	CPNE5	6380673	4418	0.202	0.4456	No
61	RHD	4050168	4421	0.202	0.4470	No
62	STAG2	4540132	4512	0.189	0.4435	No
63	BARHL1	4210113	4630	0.174	0.4384	No
64	TRIM47	5080717	4971	0.138	0.4210	No
65	NDUFA11	3780333	5040	0.133	0.4183	No
66	EZH2	6130605 6380524	5373	0.109	0.4011	No
67	ADCY8	6760519	5434	0.105	0.3987	No
68	HS6ST3	5910138	6151	0.073	0.3604	No
69	CTCF	5340017	6156	0.073	0.3607	No
70	PCSK1	2350148	6244	0.070	0.3565	No
71	JPH1	610739	6264	0.069	0.3560	No
72	SLC6A4	2230372	6505	0.062	0.3435	No
73	KCND2	1170128 2100112	6880	0.051	0.3236	No
74	ARHGAP6	2060121	6942	0.049	0.3207	No
75	SFRS1	2360440	7351	0.041	0.2989	No
76	FMO4	360735	7638	0.035	0.2836	No
77	WEE1	3390070	7693	0.034	0.2810	No
78	SMAD6	870504	7712	0.033	0.2802	No
79	ASCL1	6650100	7763	0.033	0.2778	No
80	PODN	3710068	7874	0.030	0.2720	No
81	HNRPD	4120021	7929	0.029	0.2693	No
82	ATRX	2340039 3610132 4210373	7958	0.029	0.2680	No
83	ERBB2IP	580253 1090672	7997	0.028	0.2662	No
84	GRIK2	4610164	8112	0.026	0.2602	No
85	PAPOLG	2470400	8120	0.026	0.2600	No
86	STK35	2360121	8335	0.023	0.2486	No
87	POLE2	6110041	8698	0.017	0.2291	No
88	HTF9C	3190048 4120132	8805	0.015	0.2235	No
89	AP1S2	780279 4280707	9238	0.008	0.2001	No
90	NPR3	1580239	9257	0.008	0.1992	No
91	NRP2	4070400 5860041 6650446	9923	-0.002	0.1632	No
92	TOPBP1	6020333	10057	-0.004	0.1561	No
93	SEZ6	3450722	10152	-0.006	0.1510	No
94	HIST1H1D	3440446	10301	-0.008	0.1430	No
95	DMD	1740041 3990332	11254	-0.023	0.0917	No
96	FBXO5	2630551	11285	-0.024	0.0902	No
97	IPO7	2190746	11290	-0.024	0.0902	No
98	NUP153	7000452	11304	-0.024	0.0897	No
99	ATAD2	870242 2260687	11471	-0.027	0.0809	No
100	RAD51	6110450 6980280	11523	-0.028	0.0783	No
101	PEG3	3710020	11774	-0.033	0.0650	No
102	EPHB1	4610056	11791	-0.033	0.0644	No
103	TREX2	4920707	12076	-0.040	0.0493	No
104	CASP8AP2	5910593	12484	-0.050	0.0276	No
105	MEIS1	1400575	12643	-0.054	0.0195	No
106	ONECUT1	6450136	12677	-0.055	0.0181	No
107	SEMA5A	6200110 6520435	13138	-0.071	-0.0063	No
108	UXT	110019 5080066	13171	-0.072	-0.0075	No
109	CACNA1G	3060161 4810706 5550722	13305	-0.078	-0.0141	No
110	LHX5	2350097	13388	-0.081	-0.0180	No
111	CBX5	3830072 6290167	13495	-0.086	-0.0231	No
112	CLTA	450010	13554	-0.090	-0.0256	No
113	SALL1	5420020 7050195	13724	-0.100	-0.0340	No
114	NOL4	5050446 5360519	14076	-0.126	-0.0521	No
115	ARID4A	520156 1050707	14193	-0.137	-0.0574	No
116	MCM8	6130743	14267	-0.144	-0.0603	No
117	ATE1	290491 6940722	14402	-0.157	-0.0664	No
118	DPYSL2	2100427 3130112 5700324	14617	-0.185	-0.0766	No
119	MDGA1	1170139	14732	-0.203	-0.0813	No
120	HIST1H2AH	3710333	15108	-0.294	-0.0995	No
121	CTDSP1	6650215 6940731	15116	-0.295	-0.0977	No
122	PVRL1	2570167 5220519 5890500 3190309	15123	-0.296	-0.0958	No
123	INSM1	3450671	15220	-0.328	-0.0986	No
124	CDC45L	70537 3130114	15261	-0.345	-0.0983	No
125	RANBP1	430215 1090180	15436	-0.407	-0.1047	No
126	DNMT1	2260097	15653	-0.498	-0.1128	No
127	E2F7	4200056	15794	-0.566	-0.1163	No
128	DDB2	3520341 4610168 4850184 4920717	15817	-0.577	-0.1132	No
129	KLF5	3840348	16019	-0.684	-0.1191	No
130	MAT2A	4070026 4730079 6020280	16205	-0.802	-0.1233	No
131	PCNA	940754	16217	-0.813	-0.1180	No
132	ING3	110438 2060390	16314	-0.886	-0.1167	No
133	PLK4	430162 5720110	16542	-1.027	-0.1215	No
134	FLI1	3990142	16600	-1.061	-0.1168	No
135	USP1	2760541 5690438 6220673	16673	-1.126	-0.1125	No
136	PCSK4	130687 670711 3170075 6400411	16718	-1.170	-0.1064	No
137	ORC1L	2370328 6110390	16727	-1.176	-0.0982	No
138	MAZ	3360121 6940750	16753	-1.204	-0.0908	No
139	PPP1CC	6380300 2510647	17295	-1.817	-0.1068	No
140	SLC25A14	4760180	17344	-1.873	-0.0958	No
141	PIM1	630047	17549	-2.218	-0.0906	No
142	PHF12	870400 3130687	17759	-2.611	-0.0829	No
143	PHF13	450435	17874	-2.865	-0.0682	No
144	SYT11	630433	18039	-3.311	-0.0529	No
145	RAB11B	3990609	18059	-3.370	-0.0293	No
146	MXD3	6220014	18082	-3.462	-0.0053	No
147	DCK	6900411	18345	-4.675	0.0147	No