Details for gene set V$CP2

Table: GSEA Results Summary

Dataset	Set_03_absentNotch_versus_normalThy.phenotype_absentNotch_versus_normalThy.cls #absentNotch_versus_normalThy.phenotype_absentNotch_versus_normalThy.cls #absentNotch_versus_normalThy_repos
Phenotype	phenotype_absentNotch_versus_normalThy.cls#absentNotch_versus_normalThy_repos
Upregulated in class	normalThy
GeneSet	V$CP2_02
Enrichment Score (ES)	-0.57528347
Normalized Enrichment Score (NES)	-1.5527755
Nominal p-value	0.0
FDR q-value	0.13565983
FWER p-Value	0.558

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	NR1D1	2360471 770746 6590204	825	2.570	-0.0277	No
2	DDIT4	2570408	940	2.388	-0.0182	No
3	KLHDC3	3830717	992	2.311	-0.0057	No
4	PPP1R16B	3520300	1125	2.158	0.0014	No
5	MRPL14	2370168	1150	2.120	0.0141	No
6	KCTD15	2810735	1372	1.845	0.0143	No
7	NISCH	4850301	1461	1.728	0.0210	No
8	CS	5080600	1623	1.562	0.0225	No
9	PHPT1	7050537	1684	1.514	0.0293	No
10	GRB7	2100471	1774	1.423	0.0339	No
11	RYR1	2510114 3130408 3710086	1814	1.387	0.0409	No
12	H3F3B	1410300	1974	1.240	0.0405	No
13	HTATIP	5360739	2042	1.188	0.0447	No
14	RASSF1	2760364 4850725	2065	1.165	0.0512	No
15	MORF4L2	6450133	2235	1.032	0.0488	No
16	ALDH3B1	4210010 6940403	2287	1.013	0.0528	No
17	TGFBR2	1780711 1980537 6550398	2353	0.994	0.0558	No
18	LHX2	3610463	2408	0.964	0.0592	No
19	CAMK2G	630097	2508	0.898	0.0598	No
20	GMPPB	4610538	2517	0.894	0.0653	No
21	PRKACA	2640731 4050048	2519	0.891	0.0711	No
22	FKBP2	2320025	2618	0.830	0.0713	No
23	PRKAG1	6450091	3215	0.520	0.0424	No
24	NR2F1	4120528 360402	3230	0.514	0.0450	No
25	RHBDF1	380538	3294	0.490	0.0449	No
26	SHB	4920494	3449	0.433	0.0394	No
27	RBBP6	2320129	3493	0.418	0.0398	No
28	CNTN6	2630711	3804	0.322	0.0251	No
29	EPN3	2350592	3808	0.321	0.0271	No
30	PPP2R5C	3310121 6650672	3861	0.307	0.0263	No
31	TUFT1	540047 2370010	3972	0.280	0.0222	No
32	DSCAM	1780050 2450731 2810438	4362	0.212	0.0025	No
33	MMP11	1980619	4718	0.163	-0.0156	No
34	GPC3	6180735	4898	0.145	-0.0244	No
35	ETV1	70735 2940603 5080463	4979	0.138	-0.0278	No
36	RTN1	4150452 4850176	5323	0.112	-0.0456	No
37	FGF9	1050195	5498	0.101	-0.0544	No
38	STAC2	7100022	5515	0.100	-0.0546	No
39	SLC25A28	6590600	5561	0.098	-0.0564	No
40	FOXP2	3520561 4150372 4760524	5618	0.095	-0.0588	No
41	STARD13	540722	5827	0.085	-0.0695	No
42	COX8C	4670154	5872	0.084	-0.0713	No
43	DHH	2120433	5908	0.082	-0.0727	No
44	TBX2	1990563	5974	0.080	-0.0757	No
45	TNNC1	1990575	6153	0.073	-0.0849	No
46	FEV	840369 5860139	6207	0.071	-0.0873	No
47	GPRC5C	1580372	6209	0.071	-0.0868	No
48	NRIP2	5390288	6210	0.071	-0.0864	No
49	MAPRE3	7050504	6225	0.071	-0.0867	No
50	NFATC4	2470735	6245	0.070	-0.0872	No
51	RNF121	110079 1580279	6262	0.069	-0.0876	No
52	TLX3	510619	6591	0.059	-0.1050	No
53	EFNA3	6370390	6654	0.057	-0.1080	No
54	DCX	130075 5360025 7050673	6732	0.055	-0.1118	No
55	PFTK1	1780181	6873	0.051	-0.1191	No
56	SRMS	5360402	7010	0.048	-0.1261	No
57	KCNE3	5550195	7021	0.047	-0.1264	No
58	HPCAL1	1980129 2350348	7049	0.047	-0.1275	No
59	GSH1	2760242	7099	0.046	-0.1299	No
60	CITED1	2350670	7172	0.044	-0.1335	No
61	KIF1C	2480484	7185	0.044	-0.1338	No
62	GNB3	1230167	7190	0.044	-0.1338	No
63	LYN	6040600	7419	0.039	-0.1459	No
64	HSPA1L	4010538	7537	0.037	-0.1519	No
65	PODN	3710068	7874	0.030	-0.1700	No
66	MID2	4120309	7922	0.030	-0.1723	No
67	FOXL2	5670537	7941	0.029	-0.1731	No
68	CALD1	1770129 1940397	8361	0.022	-0.1956	No
69	CREB1	1500717 2230358 3610600 6550601	8536	0.020	-0.2049	No
70	SLC26A9	3440722 5340088 7510093	8544	0.020	-0.2052	No
71	UPK2	60176	8717	0.017	-0.2144	No
72	BRUNOL6	6840373	8863	0.014	-0.2222	No
73	SLC2A9	3290301	9024	0.012	-0.2308	No
74	AQP6	510736 1570484	9133	0.010	-0.2365	No
75	FRMD3	3440731	9226	0.009	-0.2415	No
76	TBC1D5	5360619 6130603	9296	0.008	-0.2452	No
77	XPNPEP1	2640750 3850315 6200242	9366	0.007	-0.2489	No
78	ODC1	5670168	9621	0.003	-0.2626	No
79	PCDHB4	670184	9934	-0.002	-0.2795	No
80	ARHGAP5	2510619 3360035	9991	-0.003	-0.2825	No
81	ADRA1A	1230446 2260390	10081	-0.004	-0.2873	No
82	HOXB6	4210739	10098	-0.005	-0.2881	No
83	NRXN3	1400546 3360471	10156	-0.006	-0.2912	No
84	ARX	6900504	10475	-0.010	-0.3083	No
85	PTHLH	5290739	10688	-0.013	-0.3197	No
86	RAB10	2360008 5890020	10753	-0.015	-0.3231	No
87	PAK7	3830164	10835	-0.016	-0.3274	No
88	BMP4	380113	11090	-0.020	-0.3410	No
89	DSC2	840484	11605	-0.030	-0.3687	No
90	NNAT	4920053 5130253	11606	-0.030	-0.3685	No
91	C1QTNF5	1690402	11617	-0.030	-0.3688	No
92	FOXA1	3710609	11627	-0.030	-0.3691	No
93	BDNF	2940128 3520368	11802	-0.034	-0.3783	No
94	HIF1A	5670605	12295	-0.045	-0.4047	No
95	PITX2	870537 2690139	12327	-0.046	-0.4060	No
96	P518	3610435	12336	-0.046	-0.4062	No
97	PAPPA	4230463	12362	-0.047	-0.4072	No
98	CAPN6	1740168	12469	-0.049	-0.4126	No
99	TRERF1	6370017 6940138	12715	-0.057	-0.4255	No
100	PLXNA3	7050164	13182	-0.073	-0.4503	No
101	MOGAT2	60139	13371	-0.080	-0.4600	No
102	WNT10B	510050	13670	-0.097	-0.4755	No
103	TXNL5	1190609 1400164	13733	-0.101	-0.4782	No
104	GNAQ	430670 4210131 5900736	13784	-0.104	-0.4802	No
105	RPL41	6940112	13829	-0.107	-0.4819	No
106	PAX2	6040270 7000133	13874	-0.111	-0.4835	No
107	IRX3	4200112	13913	-0.114	-0.4848	No
108	NOL4	5050446 5360519	14076	-0.126	-0.4928	No
109	KIF5A	510435	14128	-0.131	-0.4947	No
110	DDR1	2060044 5220180	14663	-0.192	-0.5223	No
111	LTBP1	780035 2100746 2760402 3780551 6550184 6860193	14776	-0.213	-0.5270	No
112	LDB2	5670441 6110170	14821	-0.222	-0.5279	No
113	MDK	3840020	14975	-0.258	-0.5345	No
114	NTRK3	4050687 4070167 4610026 6100484	15042	-0.276	-0.5362	No
115	BTBD14B	3520601 4280162	15153	-0.306	-0.5402	No
116	TRAF4	3060041 4920528 6980286	15390	-0.388	-0.5504	No
117	ZNF385	450176 4810358	15490	-0.429	-0.5529	No
118	CPNE1	3440131	15561	-0.457	-0.5537	No
119	MNT	4920575	15674	-0.510	-0.5564	No
120	KIFAP3	3800524 4590082 6940075	15686	-0.514	-0.5536	No
121	FLOT2	50358 4210068 5080397	15823	-0.578	-0.5572	No
122	DDAH2	4480551	15997	-0.675	-0.5621	No
123	NEK8	5700180	16008	-0.678	-0.5582	No
124	SCAMP5	5550368 6290021	16255	-0.845	-0.5659	No
125	BACH1	290195	16429	-0.961	-0.5689	Yes
126	YWHAG	3780341	16437	-0.964	-0.5630	Yes
127	UBE1	4150139 7050463	16518	-1.011	-0.5606	Yes
128	EPC1	1570050 5290095 6900193	16571	-1.040	-0.5566	Yes
129	FLI1	3990142	16600	-1.061	-0.5511	Yes
130	CRK	1230162 4780128	16625	-1.085	-0.5452	Yes
131	MAPK3	580161 4780035	16632	-1.091	-0.5383	Yes
132	CLDN4	4920739	16741	-1.189	-0.5363	Yes
133	CHD4	5420059 6130338 6380717	16744	-1.194	-0.5286	Yes
134	TLN1	6590411	16778	-1.235	-0.5222	Yes
135	SLC9A1	2650093	16874	-1.327	-0.5186	Yes
136	ATP10D	4850139	17139	-1.619	-0.5222	Yes
137	GSK3B	5360348	17303	-1.823	-0.5190	Yes
138	SLC25A14	4760180	17344	-1.873	-0.5088	Yes
139	RHBDL1	1500736	17386	-1.956	-0.4981	Yes
140	TRIM8	6130441	17722	-2.539	-0.4995	Yes
141	MAST2	6200348	17727	-2.546	-0.4829	Yes
142	TRPV2	7100348	17781	-2.656	-0.4683	Yes
143	LZTS2	2260440	17810	-2.702	-0.4520	Yes
144	HCFC1	2260008	17838	-2.780	-0.4351	Yes
145	GLTP	3440603	17866	-2.854	-0.4177	Yes
146	PRKCH	5720079	17901	-2.912	-0.4003	Yes
147	NRF1	2650195	17980	-3.111	-0.3840	Yes
148	DUSP6	5910286 7100070	17982	-3.129	-0.3634	Yes
149	GABARAP	1450286	18089	-3.487	-0.3461	Yes
150	JUNB	4230048	18168	-3.777	-0.3254	Yes
151	NGFRAP1	6770195	18242	-4.099	-0.3023	Yes
152	BCL11B	2680673	18265	-4.208	-0.2758	Yes
153	PTCRA	6940142	18341	-4.648	-0.2491	Yes
154	FBS1	2570520	18411	-5.173	-0.2187	Yes
155	CAP1	2650278	18426	-5.284	-0.1846	Yes
156	DNAJB1	1090041	18430	-5.350	-0.1495	Yes
157	CDC42EP3	2480138	18467	-5.715	-0.1137	Yes
158	DEF6	840593	18489	-6.000	-0.0752	Yes
159	KCNH2	1170451	18497	-6.062	-0.0356	Yes
160	PPP1R9B	3130619	18523	-6.362	0.0050	Yes