Details for gene set TGACCTTG_V$SF1

Table: GSEA Results Summary

Dataset	Set_03_absentNotch_versus_normalThy.phenotype_absentNotch_versus_normalThy.cls #absentNotch_versus_normalThy.phenotype_absentNotch_versus_normalThy.cls #absentNotch_versus_normalThy_repos
Phenotype	phenotype_absentNotch_versus_normalThy.cls#absentNotch_versus_normalThy_repos
Upregulated in class	absentNotch
GeneSet	TGACCTTG_V$SF1_Q6
Enrichment Score (ES)	0.50114805
Normalized Enrichment Score (NES)	1.3901323
Nominal p-value	0.0044247787
FDR q-value	0.43666032
FWER p-Value	0.998

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	SCN5A	4070017	27	7.351	0.0496	Yes
2	CYC1	2850546	154	4.832	0.0763	Yes
3	ATP5G1	5290019	171	4.688	0.1080	Yes
4	TFRC	4050551	213	4.421	0.1364	Yes
5	TRAP1	6040168	228	4.327	0.1657	Yes
6	ALDOA	6290672	348	3.761	0.1854	Yes
7	VDAC2	7000215	560	3.129	0.1957	Yes
8	HSPE1	3170438	569	3.119	0.2169	Yes
9	IDH3A	460332	630	2.963	0.2342	Yes
10	APP	2510053	634	2.946	0.2545	Yes
11	PHF5A	2690519	652	2.899	0.2737	Yes
12	SDK1	2850139	705	2.812	0.2904	Yes
13	ACO2	4230600	888	2.467	0.2977	Yes
14	CCNE1	110064	949	2.374	0.3109	Yes
15	ZDHHC21	2370338	957	2.357	0.3269	Yes
16	PPP1R16B	3520300	1125	2.158	0.3328	Yes
17	RAB3A	3940288	1130	2.154	0.3475	Yes
18	FSTL3	5420279	1188	2.074	0.3588	Yes
19	TOMM40	6110017	1256	1.984	0.3690	Yes
20	UQCRC1	520053	1300	1.940	0.3801	Yes
21	SLC6A8	3940341	1316	1.924	0.3927	Yes
22	PRPSAP1	6980494	1366	1.853	0.4029	Yes
23	ATP5C1	5910601	1387	1.828	0.4145	Yes
24	AK2	4590458 4760195 6110097	1395	1.814	0.4267	Yes
25	LAMB2	4920184	1565	1.609	0.4287	Yes
26	RBMX	7100162 2900541	1619	1.566	0.4367	Yes
27	CS	5080600	1623	1.562	0.4474	Yes
28	NDUFB5	110685	1823	1.382	0.4462	Yes
29	CKB	4560632	1843	1.370	0.4547	Yes
30	MADD	6100725 7000088	1954	1.261	0.4574	Yes
31	DNAJC11	360465 3390215	2110	1.132	0.4569	Yes
32	HSPD1	60097 2030451	2231	1.033	0.4576	Yes
33	SDHD	2570128	2260	1.023	0.4632	Yes
34	POLR3D	580037 6420615	2262	1.022	0.4702	Yes
35	ATP5J	4210100 6900288	2343	0.997	0.4728	Yes
36	FANCD2	1850280 6840348	2448	0.942	0.4737	Yes
37	TBX6	4730139 6840647	2460	0.935	0.4796	Yes
38	CAMK2G	630097	2508	0.898	0.4833	Yes
39	AFG3L2	5130332	2512	0.897	0.4893	Yes
40	PCTK1	4560079	2576	0.862	0.4919	Yes
41	BLCAP	3990253	2620	0.829	0.4953	Yes
42	CTSD	1070195	2682	0.791	0.4975	Yes
43	RBMS1	6400014	2796	0.721	0.4964	Yes
44	COMTD1	1170193	2851	0.695	0.4983	Yes
45	PHF15	6550066 6860673	2930	0.658	0.4986	Yes
46	NTF3	5890131	2966	0.636	0.5011	Yes
47	COX5B	6550670	3093	0.576	0.4983	No
48	KIN	6550014	3209	0.525	0.4957	No
49	CA2	1660113 1660600	3383	0.454	0.4895	No
50	UBL3	6450458	3429	0.440	0.4901	No
51	RNF4	580286 1400152	3681	0.358	0.4790	No
52	CACNB2	1500095 7330707	3778	0.328	0.4761	No
53	RNF139	2650114 3610450	3783	0.327	0.4781	No
54	EPN3	2350592	3808	0.321	0.4790	No
55	SYNGR1	5130452 6650056	3875	0.304	0.4776	No
56	KLK15	6350086	3923	0.293	0.4771	No
57	TIMM8B	1190364	3945	0.288	0.4779	No
58	NCDN	50040 1980739 3520603	4138	0.248	0.4692	No
59	RHOT1	6760692	4145	0.246	0.4706	No
60	SNPH	2680484	4187	0.239	0.4701	No
61	ATP6AP2	4010059 5080315 7100347 6660484	4227	0.232	0.4696	No
62	CNTF	450128 870253 1780068 6520195	4243	0.231	0.4703	No
63	PCDH7	450398 4150040	4265	0.227	0.4708	No
64	ATP5G3	4230551	4782	0.156	0.4439	No
65	SLC38A3	5340142	4831	0.151	0.4423	No
66	CEL	2640278	4878	0.147	0.4409	No
67	DNER	3610170	4974	0.138	0.4367	No
68	KCNG4	1850736 5050113	5106	0.128	0.4305	No
69	AMPD3	610369 3360528	5132	0.126	0.4300	No
70	GABRA3	4810142	5192	0.120	0.4276	No
71	NTNG2	1770438 6380408	5262	0.115	0.4247	No
72	SEMA7A	2630239 5050593	5414	0.106	0.4172	No
73	FGF9	1050195	5498	0.101	0.4134	No
74	STAC2	7100022	5515	0.100	0.4133	No
75	HOXC10	5360170	5573	0.097	0.4108	No
76	NDFIP1	1980402	5641	0.094	0.4079	No
77	RAPGEF5	1500603 3450427 6130056	5897	0.083	0.3946	No
78	AMY2A	580138	6049	0.077	0.3870	No
79	TNNI1	3710040	6113	0.075	0.3841	No
80	KIRREL3	2630195	6140	0.074	0.3832	No
81	PDHX	870315	6154	0.073	0.3830	No
82	CHAT	6840603	6633	0.058	0.3575	No
83	ATP6V1B1	6100181	6673	0.057	0.3557	No
84	CHGA	1990056 6550463	6748	0.054	0.3521	No
85	WDFY3	3610041 4560333 4570273	6835	0.052	0.3478	No
86	NXPH4	3830500	6853	0.051	0.3472	No
87	SH3GL2	1990176 3830494	7031	0.047	0.3380	No
88	FZD9	5360136	7042	0.047	0.3378	No
89	RIN2	2450184	7078	0.046	0.3362	No
90	MEF2C	670025 780338	7167	0.044	0.3317	No
91	LRFN5	6650088	7303	0.042	0.3247	No
92	CASQ2	3170136	7556	0.037	0.3113	No
93	NPTX2	70021	7576	0.036	0.3105	No
94	MYL3	6040563	7617	0.035	0.3086	No
95	EEF1A2	2260162 5290086	7714	0.033	0.3036	No
96	SLC37A2	2970750	7737	0.033	0.3026	No
97	ZRANB1	510373 4540278	7834	0.031	0.2977	No
98	SNTG1	6770373	7866	0.031	0.2962	No
99	CNTN2	2760204	8338	0.023	0.2708	No
100	SLC2A4	540441	8543	0.020	0.2599	No
101	DSCR1L1	940438	8801	0.015	0.2461	No
102	HTF9C	3190048 4120132	8805	0.015	0.2460	No
103	TBC1D15	870673	8853	0.014	0.2436	No
104	EPS8L2	2850528	8885	0.014	0.2420	No
105	UCHL1	1230066	9276	0.008	0.2209	No
106	CDH16	1450129	9347	0.007	0.2171	No
107	CATSPER2	2940403	9590	0.004	0.2040	No
108	AUH	5570152	9691	0.002	0.1986	No
109	RGS7	3390044	9716	0.001	0.1973	No
110	RPH3A	2190156	9738	0.001	0.1962	No
111	MTX2	6660288	9791	0.000	0.1934	No
112	KCNK1	1050068	9819	-0.000	0.1919	No
113	HMGB3	2940168	9954	-0.003	0.1847	No
114	TIMM9	2450484	10266	-0.007	0.1679	No
115	ABHD3	2370091	10320	-0.008	0.1651	No
116	DIRAS1	2640270	10497	-0.011	0.1556	No
117	HCN1	5130458	10927	-0.017	0.1325	No
118	CX3CL1	3990707	11023	-0.019	0.1274	No
119	SLC30A3	1850451	11066	-0.020	0.1253	No
120	KCNMB2	3780128 4760136	11190	-0.022	0.1188	No
121	NNAT	4920053 5130253	11606	-0.030	0.0965	No
122	STK32A	5890332	11640	-0.031	0.0949	No
123	YWHAH	1660133 2810053	12447	-0.049	0.0516	No
124	HOXC13	4070722	12451	-0.049	0.0517	No
125	TCF2	870338 5050632	12551	-0.051	0.0467	No
126	XYLT1	6550403	12583	-0.052	0.0454	No
127	CDKL5	2450070	13048	-0.067	0.0207	No
128	HCN4	1050026	13187	-0.073	0.0138	No
129	RHCG	6550309	13452	-0.084	0.0000	No
130	ELAVL3	2850014	13765	-0.102	-0.0162	No
131	MASP1	1780619 2900066	13773	-0.103	-0.0158	No
132	PNOC	1990114	13837	-0.108	-0.0185	No
133	PHACTR3	3850435 5900445	13838	-0.108	-0.0178	No
134	VSNL1	3120017	14068	-0.125	-0.0293	No
135	KIF5A	510435	14128	-0.131	-0.0316	No
136	ASTN2	2570136 6940040	14134	-0.131	-0.0310	No
137	DEXI	6220358 6550685	14222	-0.139	-0.0347	No
138	TUBB4	5310681	14382	-0.154	-0.0423	No
139	ATP6V0C	1780609	14595	-0.182	-0.0525	No
140	GBAS	6760278	14707	-0.198	-0.0571	No
141	INSR	1190504	14759	-0.209	-0.0584	No
142	MAEA	1170392	14764	-0.210	-0.0572	No
143	MAL	4280487 4590239	14839	-0.226	-0.0596	No
144	SV2A	1450039 5570685	14955	-0.252	-0.0641	No
145	MEF2D	5690576	15003	-0.266	-0.0648	No
146	SLC9A7	5360301	15286	-0.351	-0.0777	No
147	RANBP1	430215 1090180	15436	-0.407	-0.0829	No
148	MTCH2	3780603 6620215	15458	-0.418	-0.0812	No
149	ATP5B	3870138	15483	-0.427	-0.0795	No
150	MNT	4920575	15674	-0.510	-0.0863	No
151	SEMA3F	5420601 6770731	15698	-0.520	-0.0839	No
152	ZNF289	3610390 3870711 3940138 5340373	15718	-0.530	-0.0813	No
153	COX4I1	5340427	15825	-0.579	-0.0830	No
154	GABPA	2360017 4780301 4850279	15846	-0.588	-0.0800	No
155	PANK1	670091 6220605	16250	-0.843	-0.0960	No
156	PPP3CC	2450139	16390	-0.935	-0.0970	No
157	MSI2	1190066 5270039	16423	-0.954	-0.0921	No
158	VASP	7050500	16479	-0.992	-0.0882	No
159	UBE1	4150139 7050463	16518	-1.011	-0.0833	No
160	ESRRA	6550242	16823	-1.271	-0.0909	No
161	VAMP2	2100100	17100	-1.571	-0.0950	No
162	CHD2	4070039	17182	-1.689	-0.0876	No
163	IMMT	870450 4280438	17227	-1.732	-0.0780	No
164	MGST3	3450338 5290736	17445	-2.055	-0.0755	No
165	CRSP7	4230408	17535	-2.184	-0.0652	No
166	FBXO18	1240731 6370541	17764	-2.618	-0.0593	No
167	ARF3	3710446	17803	-2.693	-0.0427	No
168	ATP1B1	3130594	18145	-3.686	-0.0356	No
169	RANBP10	2340184	18203	-3.900	-0.0116	No
170	GABARAPL1	2810458	18376	-4.892	0.0130	No