DatasetSet_03_absentNotch_versus_normalThy.phenotype_absentNotch_versus_normalThy.cls
#absentNotch_versus_normalThy.phenotype_absentNotch_versus_normalThy.cls
#absentNotch_versus_normalThy_repos
Phenotypephenotype_absentNotch_versus_normalThy.cls#absentNotch_versus_normalThy_repos
Upregulated in classnormalThy
GeneSetGCACTTT,MIR-17-5P,MIR-20A,MIR-106A,MIR-106B,MIR-20B,MIR-519D
Enrichment Score (ES)-0.5276643
Normalized Enrichment Score (NES)-1.5473877
Nominal p-value0.0
FDR q-value0.11255764
FWER p-Value0.597
Table: GSEA Results Summary



Fig 1: Enrichment plot: GCACTTT,MIR-17-5P,MIR-20A,MIR-106A,MIR-106B,MIR-20B,MIR-519D   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEDESCRIPTION
(from dataset)
GENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1SLC6A924705201085.2160.0095No
2RBBP7430113 450450 23703095663.123-0.0063No
3APP25100536342.946-0.0012No
4AHCTF170401006412.9280.0071No
5EGLN316604846552.8930.0150No
6TNFAIP169405937722.6740.0166No
7E2F153600938472.5250.0200No
8ARHGEF334401568942.4560.0248No
9RPS6KA141206479282.4060.0301No
10RGMA245071110412.2490.0306No
11KIF23557011211972.0640.0282No
12EFNB1297043312641.9750.0305No
13CDKN1A4050088 640070612701.9700.0361No
14DDX11659067112881.9570.0409No
15CXXC6281016813981.8030.0403No
16FJX1339003515111.6640.0391No
17SMOC2117017015391.6370.0425No
18PPP3R11190041 157048715921.5810.0443No
19LAPTM4A45009216721.5270.0445No
20DAZAP2620010216731.5260.0490No
21KLF9384002216821.5180.0531No
22SFMBT12360450 237007017361.4580.0545No
23ZNF148642040317541.4410.0578No
24RPS6KA3198070718011.3990.0595No
25PHTF2659005318981.3120.0581No
26NEK9344040220581.1750.0529No
27SENP1610053720761.1610.0554No
28TOPORS406059220781.1600.0588No
29TRPS187010020811.1580.0621No
30SLC40A1237028621071.1350.0641No
31TNFRSF21638010021481.0960.0651No
32CELSR22320148 622015221601.0890.0678No
33SFRS250707 38059322421.0280.0664No
34FASTK2690053 4280288 4610551 637029222921.0110.0667No
35TGFBR21780711 1980537 655039823530.9940.0663No
36KPNA3704008824110.9630.0661No
37RAB22A110500 383070724440.9430.0671No
38TRIM361400600 1980082 513003724660.9300.0687No
39CCND1460524 770309 3120576 698039824750.9230.0710No
40ZBTB7A378009226190.8300.0656No
41SEMA4G589002627740.7320.0593No
42THRA6770341 110164 199060027790.7310.0613No
43YTHDF34540632 4670717 704060927860.7280.0631No
44MARCH86039727980.7190.0646No
45ASF1A705002028260.7100.0653No
46PBX31300424 3710577 618057528840.6790.0642No
47RBL1313037229630.6370.0618No
48HABP484048730070.6170.0612No
49STC136016130660.5910.0598No
50SYAP1141050030710.5880.0613No
51TRIP1046043831100.5670.0609No
52L3MBTL33800113 666006831150.5630.0624No
53PPP2R2A2900014 570057531200.5610.0638No
54NR4A26027331830.5320.0620No
55ADAM9336041132220.5170.0614No
56EIF4G23800575 686018432240.5160.0629No
57CRY2629072232900.4910.0608No
58SS18L14610180 655006833070.4830.0614No
59PTPRO1940576 637033233220.4790.0620No
60PFN2730040 570002633900.4510.0597No
61ANKFY1360309 539002134460.4330.0579No
62SLC4A7237005635170.4120.0553No
63RAP2C169013236750.3600.0478No
64FGD1478002136760.3600.0488No
65ARID4B730754 666002637020.3510.0485No
66E2F350162 46018037260.3430.0483No
67PDGFRA294033237340.3410.0489No
68NPAS277067038250.3170.0449No
69KCNQ2130204 290291 586013239020.2990.0416No
70TBL1X640052439540.2860.0397No
71CD69380167 473008840390.2690.0358No
72ANKRD13C527020240430.2670.0365No
73SAR1B251027340640.2620.0362No
74RHOC206024240730.2600.0365No
75TGOLN2492043340890.2570.0364No
76KPNA2345011440930.2570.0370No
77SMAD5570049741760.2410.0332No
78POLQ1050053 219010242960.2230.0274No
79SNX1687044643860.2060.0231No
80TBX3257067244010.2040.0229No
81HAS2536018144280.2010.0221No
82PCDHA11151025344450.1990.0218No
83MORF4L1319010044630.1970.0215No
84LUZP1940075 4280458 618007044690.1960.0218No
85PKIA407044144910.1930.0212No
86PANX2756012145050.1900.0210No
87ST8SIA2268008245090.1900.0214No
88KCNJ10226057745300.1870.0209No
89P2RX42060497 665016246790.1680.0133No
90RTN2448053846890.1670.0133No
91VPS26A1940494 572005947010.1650.0131No
92NFAT52510411 5890195 655015247020.1650.0136No
93ZFYVE96980288 710001747060.1640.0140No
94DPYSL5490033347860.1550.0101No
95ZDHHC1387003548210.1520.0087No
96RABGAP1505039748300.1510.0087No
97BRMS1L611060949330.1420.0035No
98ST6GALNAC3407056349380.1410.0037No
99ETV170735 2940603 508046349790.1380.0019No
100NBL1248002149820.1380.0022No
101RASD1245046350000.1360.0017No
102PPP3CA4760332 676009250020.1360.0020No
103LASS65890576 652013850070.1360.0022No
104PCDHA6780333 237028052030.120-0.0081No
105RNF6264003552570.116-0.0107No
106NEUROG2542027852800.114-0.0116No
107SASH1407027053240.112-0.0136No
108ACSL4510020 1240041 3190050 4540500 557046354530.104-0.0203No
109ABHD24850504 684001055110.101-0.0231No
110APBB2513040355850.097-0.0269No
111PURB536013855950.097-0.0271No
112RABEP14760427 620046356910.091-0.0320No
113ARHGEF103120593 690067356960.091-0.0320No
114EPHA5234067157730.088-0.0359No
115ARHGAP12105018158110.086-0.0376No
116UBE2J1407013358650.084-0.0403No
117FNDC3A2690097 329004459200.082-0.0430No
118ZFPM246007259360.081-0.0436No
119OLFM3580112 1050072 407020460090.078-0.0473No
120PKD2467039060310.078-0.0483No
121MAPRE3705050462250.071-0.0586No
122QKI5220093 613004462680.069-0.0607No
123FBXL5510088 770075 297030963200.067-0.0633No
124FLT13830167 492043865080.062-0.0734No
125MAP3K9329070765320.061-0.0745No
126PHF63120632 399004168280.052-0.0905No
127NPAS3630408 461006668320.052-0.0905No
128MASTL380433 4480215 539030168340.052-0.0904No
129WDFY33610041 4560333 457027368350.052-0.0903No
130PLCB12570050 710010269350.049-0.0956No
131ZBTB4645044169700.048-0.0973No
132SOCS61170347 710028074050.040-0.1210No
133OXR12370039 319070674120.040-0.1212No
134PIK3R1473067174320.039-0.1221No
135RSBN1700048775410.037-0.1280No
136PLXNA17006675940.036-0.1307No
137JUB5860711 590050076660.034-0.1345No
138SLC17A7700003776690.034-0.1345No
139WEE1339007076930.034-0.1357No
140SMAD687050477120.033-0.1366No
141BNC2481060378320.031-0.1430No
142KCNMA1145040278950.030-0.1463No
143ATP1A211027879000.030-0.1464No
144FOXL2567053779410.029-0.1486No
145SERTAD22810673 684045079680.029-0.1499No
146KLF11684073979700.029-0.1499No
147SP8406057679890.028-0.1508No
148LHX8570034781210.026-0.1579No
149DNAJB946011481750.025-0.1607No
150PTPN4141004781900.025-0.1614No
151PTGFRN412052482180.024-0.1628No
152ZNF25677025382220.024-0.1629No
153M6PR2480458 3290593 384032482340.024-0.1635No
154BTG3705007982460.024-0.1640No
155TAOK2110575 638069282550.024-0.1644No
156PCDHA12281021582610.024-0.1646No
157VLDLR870722 3060047 5340452 655013183220.023-0.1678No
158VSX14610605 665011283230.023-0.1677No
159CALD11770129 194039783610.022-0.1697No
160PCDHA10383072583820.022-0.1707No
161RAPGEF4610056384700.021-0.1754No
162KLF121660095 4810288 5340546 652028684720.021-0.1754No
163SLC2A454044185430.020-0.1792No
164SSX2IP461017685540.019-0.1797No
165DNAJB62810309 557045186240.018-0.1834No
166NHLH1610045287430.016-0.1899No
167PAFAH1B25360546 686067288140.015-0.1937No
168EDG1420061988960.014-0.1981No
169LDLR567038689270.013-0.1997No
170PCDHA1940026 54048489620.013-0.2015No
171TMEM16F586000889970.012-0.2033No
172F3294018090380.011-0.2055No
173PCDHA3384040290460.011-0.2058No
174SLC1A2223052090650.011-0.2068No
175BTBD773028891300.010-0.2103No
176ANUBL1158011391340.010-0.2104No
177MMP24534015492030.009-0.2141No
178CNOT72450338 572039792890.008-0.2188No
179TNFSF11635020493110.007-0.2199No
180ANK2651054694380.006-0.2268No
181EPAS1529015695530.004-0.2330No
182ALX4387001995690.004-0.2339No
183BAMBI665046395890.004-0.2349No
184CCNT22100390 415056396050.003-0.2357No
185WAC5340390 591016496430.003-0.2377No
186OSBPL53840537 604028696540.002-0.2383No
187NKIRAS12510440 557067197310.001-0.2424No
188MAP3K122470373 64201629831-0.000-0.2479No
189PURA38701569881-0.001-0.2505No
190ABCA162901569882-0.001-0.2505No
191TNFSF1219404659894-0.002-0.2511No
192NRP24070400 5860041 66504469923-0.002-0.2527No
193HMGB329401689954-0.003-0.2543No
194PCYT1B17804029971-0.003-0.2552No
195BHLHB3345043810003-0.003-0.2569No
196GABPB26130450 705073510310-0.008-0.2736No
197PTPN387036910413-0.009-0.2792No
198NPAT3800594 467002610415-0.009-0.2792No
199SET665028610418-0.010-0.2793No
200PCAF2230161 2570369 655045110438-0.010-0.2803No
201SMAD743037710516-0.011-0.2845No
202COL4A3591007510618-0.012-0.2900No
203PTHLH529073910688-0.013-0.2938No
204ANKRD96025310696-0.014-0.2941No
205PCDHA5297034710718-0.014-0.2952No
206RAB102360008 589002010753-0.015-0.2971No
207PAK7383016410835-0.016-0.3015No
208EIF2C1690055110860-0.016-0.3027No
209SLC30A3185045111066-0.020-0.3139No
210SH3BP5710040811142-0.021-0.3180No
211STK38710011411220-0.023-0.3221No
212EIF5A2704013911265-0.023-0.3245No
213MYT1L5670369 666040311308-0.024-0.3267No
214RHOV586010011333-0.025-0.3280No
215MAT2B1690139 251070611385-0.026-0.3307No
216ATAD2870242 226068711471-0.027-0.3353No
217MAPK487014211478-0.027-0.3355No
218NTN4694039811492-0.028-0.3361No
219HLF237011311500-0.028-0.3365No
220PPARA206002611553-0.029-0.3392No
221FOXA1371060911627-0.030-0.3431No
222CCNJ87004711755-0.033-0.3500No
223GRM7423011011800-0.034-0.3523No
224DDX5940021 2630338 344014811837-0.034-0.3542No
225ATP2B2378039712068-0.040-0.3667No
226TRPV6401071712075-0.040-0.3669No
227SCML2329060312161-0.042-0.3715No
228RNF1281230300 567027312190-0.043-0.3729No
229MGEA5610001412253-0.044-0.3761No
230HIF1A567060512295-0.045-0.3783No
231PCDHA7185001912301-0.045-0.3784No
232YES1610005012333-0.046-0.3800No
233LHX62360731 336039712341-0.046-0.3802No
234SLC24A4210048712361-0.047-0.3811No
235E2F5586057512468-0.049-0.3868No
236SUMF173005012590-0.053-0.3933No
237TRIM3557015612632-0.054-0.3954No
238CREB5232036812691-0.056-0.3984No
239FAM60A394009212791-0.059-0.4036No
240FBXW11645063212804-0.059-0.4041No
241PGBD5119004712848-0.061-0.4063No
242PAPOLA4200286 485011212868-0.061-0.4072No
243SLITRK3591004112929-0.063-0.4103No
244NR4A32900021 5860095 591003913009-0.066-0.4144No
245BMPR25340066 696032813071-0.068-0.4175No
246HMGA22940121 3390647 5130279 640013613072-0.068-0.4173No
247EREG50519 492012913211-0.074-0.4247No
248NUP35534040813244-0.075-0.4262No
249STYX109035813277-0.076-0.4278No
250MYO1D676029213320-0.078-0.4298No
251MAP3K56020041 638016213361-0.080-0.4318No
252WNK3406005313451-0.084-0.4364No
253PLEKHA3508006813456-0.084-0.4364No
254RB1CC1510494 710007213468-0.084-0.4368No
255BCL2L22760692 677073913474-0.085-0.4368No
256DUSP8665003913541-0.090-0.4401No
257PRRX14120193 448039013550-0.090-0.4403No
258DDHD13450241 3940523 638015613641-0.096-0.4450No
259CYP26B1263014213657-0.096-0.4455No
260MAP3K238027013753-0.101-0.4504No
261SSFA2387013313956-0.117-0.4612No
262GNB54480736 6550722 677046313969-0.118-0.4615No
263VANGL138016213979-0.119-0.4616No
264TNKS1BP1704018414029-0.123-0.4639No
265PAFAH1B14230333 6420121 645006614030-0.123-0.4636No
266EPHA71190288 401027814086-0.127-0.4662No
267DCBLD2589033314122-0.130-0.4677No
268KIF5A51043514128-0.131-0.4676No
269ARID4A520156 105070714193-0.137-0.4707No
270NIPA138060014197-0.137-0.4705No
271RGL11500097 690045014239-0.141-0.4723No
272RAB11FIP1247033314246-0.142-0.4722No
273EFTUD1536073614329-0.149-0.4763No
274FGD53520438 406050014364-0.152-0.4777No
275MKNK21240020 527009214407-0.157-0.4795No
276PARD6B412060014449-0.161-0.4813No
277DPYSL22100427 3130112 570032414617-0.185-0.4899No
278ARHGAP12810010 527006414656-0.191-0.4915No
279NR2C2610009714699-0.197-0.4932No
280NANOS1130040214746-0.206-0.4951No
281CSNK1G1840082 1230575 394064714756-0.208-0.4950No
282CNOT42320242 676070614787-0.215-0.4960No
283CFL2380239 620036814820-0.221-0.4971No
284FURIN412016814823-0.222-0.4965No
285PLAG11450142 3870139 652003914906-0.239-0.5003No
286MINK1586064714908-0.240-0.4997No
287EPHA446075014987-0.261-0.5032No
288CRIM113049115030-0.272-0.5047No
289CHD9430037 2570129 542039815065-0.282-0.5057No
290TNRC6A1240537 6130037 620001015066-0.282-0.5048No
291DLGAP21090348 684015415135-0.299-0.5077No
292YPEL2556060915157-0.308-0.5079No
293BCL2L11780044 420060115249-0.339-0.5119No
294PHF14010577 642005315307-0.357-0.5140No
295SNF1LK611040315311-0.360-0.5131No
296XRN1590009315417-0.396-0.5177No
297LACE1141007915600-0.472-0.5263Yes
298RRM26350059 694016215607-0.475-0.5252Yes
299TAL1704023915617-0.479-0.5243Yes
300CLOCK1410070 2940292 339007515618-0.480-0.5228Yes
301TIMP2478060915643-0.495-0.5227Yes
302MAPRE1329003715648-0.496-0.5214Yes
303NEUROG138034115656-0.499-0.5203Yes
304STX64850750 677027815661-0.501-0.5191Yes
305EZH1705041115744-0.542-0.5220Yes
306MARK473051915838-0.585-0.5253Yes
307DMTF15910047 1570497 2480100 662023915871-0.603-0.5253Yes
308LIMK1508006415880-0.606-0.5239Yes
309AKT31580270 329027815882-0.607-0.5222Yes
310RPS6KA52120563 704054615915-0.625-0.5221Yes
311HN1336015615969-0.656-0.5231Yes
312SKI659000815973-0.660-0.5213Yes
313MAP3K8294028615987-0.666-0.5200Yes
314ORMDL3134071116042-0.692-0.5209Yes
315OSR1150002516095-0.727-0.5216Yes
316SPRY4157059416103-0.733-0.5198Yes
317FRMD4A219017616156-0.764-0.5204Yes
318PLEKHM11050161 199075016162-0.768-0.5184Yes
319USP3206033216203-0.796-0.5182Yes
320RKHD1686057716370-0.920-0.5246Yes
321RAB5B130397 1980273 690073116415-0.947-0.5242Yes
322RBL2580446 140067016477-0.991-0.5246Yes
323MAPK92060273 3780209 407039716489-0.997-0.5223Yes
324HBP12510102 3130010 421061916493-0.998-0.5195Yes
325BNIP21410475 677008816500-1.000-0.5168Yes
326BICD2109041116507-1.005-0.5142Yes
327MTMR31050014 492018016517-1.011-0.5117Yes
328ATXN1555015616523-1.014-0.5090Yes
329PKD1604067116550-1.029-0.5073Yes
330CRK1230162 478012816625-1.085-0.5082Yes
331DEDD640013116735-1.184-0.5106Yes
332FEM1C60300 6130717 698016416822-1.271-0.5116Yes
333PTEN339006416842-1.294-0.5088Yes
334WDR42A620001916875-1.327-0.5066Yes
335DNM250176 317027916937-1.388-0.5058Yes
336RB1590033816977-1.425-0.5038Yes
337SOX4226009116991-1.439-0.5002Yes
338ZHX2290045217055-1.511-0.4992Yes
339PERQ1134016417072-1.539-0.4955Yes
340DYNC1LI25033817110-1.588-0.4928Yes
341IRF12340152 3450592 6290121 698057717156-1.653-0.4904Yes
342SSH236005617159-1.657-0.4856Yes
343FBXO21655007017187-1.695-0.4820Yes
344ELK3460377 1400762 371049717230-1.736-0.4792Yes
345HRBL1850102 3830253 478017617247-1.764-0.4748Yes
346RASSF22480079 572054617254-1.776-0.4699Yes
347WDR372630519 684034717294-1.817-0.4666Yes
348MECP2194045017335-1.863-0.4633Yes
349TUSC2158025317371-1.914-0.4595Yes
350PKNOX1421045217372-1.916-0.4538Yes
351CCND2534016717384-1.954-0.4487Yes
352MAP3K14589043517399-1.981-0.4435Yes
353ITCH1410731 570002217407-1.989-0.4380Yes
354GOSR173027917451-2.062-0.4343Yes
355RUNX1384071117468-2.087-0.4290Yes
356HECA331061217476-2.101-0.4231Yes
357ENPP5178033817501-2.127-0.4181Yes
358TSG10177014817548-2.216-0.4141Yes
359NCOA3454019517565-2.257-0.4082Yes
360SQSTM1655005617609-2.328-0.4037Yes
361SEMA4B11034717619-2.347-0.3972Yes
362ATG16L1539029217630-2.357-0.3908Yes
363CCNG2319009517648-2.387-0.3846Yes
364SRPK145011017663-2.414-0.3782Yes
365DUSP2237018417680-2.450-0.3719Yes
366MKRN1141009717729-2.546-0.3669Yes
367GAB1297015617814-2.721-0.3635Yes
368ZDHHC9394020417815-2.728-0.3554Yes
369PPP6C245067017827-2.761-0.3478Yes
370FOXJ2245044117877-2.870-0.3420Yes
371MAP3K11700003917924-2.956-0.3357Yes
372MIDN2260132 522037717925-2.959-0.3269Yes
373NDEL1237046517955-3.042-0.3195Yes
374ULK1610031518024-3.270-0.3135Yes
375ANKRD5087054318031-3.296-0.3041Yes
376CAMTA2399007518113-3.569-0.2979Yes
377TLE41450064 150051918118-3.582-0.2875Yes
378UBE3C314067318119-3.584-0.2769Yes
379ARHGEF11178028818124-3.598-0.2664Yes
380NAGK730041 3170086 589005318149-3.706-0.2568Yes
381BCL11B268067318265-4.208-0.2506Yes
382STAT3460040 371034118266-4.219-0.2381Yes
383MCL1166067218272-4.239-0.2258Yes
384DYRK1A319018118286-4.333-0.2136Yes
385NEDD4L638036818303-4.476-0.2012Yes
386MAP3K361068518320-4.550-0.1886Yes
387LRRIQ23990064 6370673 638037218346-4.682-0.1761Yes
388CIC637016118357-4.746-0.1626Yes
389ZFYVE26686015218368-4.851-0.1487Yes
390SORL163020418393-5.016-0.1352Yes
391IHPK1134005318405-5.119-0.1206Yes
392LRIG1105013618442-5.435-0.1064Yes
393EGR2380040318471-5.748-0.0909Yes
394PLAGL2177014818480-5.805-0.0741Yes
395ARHGEF18212027918501-6.079-0.0572Yes
396ARL4C119027918521-6.342-0.0394Yes
397EHD3536048418541-6.569-0.0210Yes
398SMOC184003918592-8.4340.0013Yes
Table: GSEA details [plain text format]



Fig 2: GCACTTT,MIR-17-5P,MIR-20A,MIR-106A,MIR-106B,MIR-20B,MIR-519D   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: GCACTTT,MIR-17-5P,MIR-20A,MIR-106A,MIR-106B,MIR-20B,MIR-519D: Random ES distribution   
Gene set null distribution of ES for GCACTTT,MIR-17-5P,MIR-20A,MIR-106A,MIR-106B,MIR-20B,MIR-519D