Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | Set_03_absentNotch_versus_normalThy.phenotype_absentNotch_versus_normalThy.cls #absentNotch_versus_normalThy.phenotype_absentNotch_versus_normalThy.cls #absentNotch_versus_normalThy_repos |
| Phenotype | phenotype_absentNotch_versus_normalThy.cls#absentNotch_versus_normalThy_repos |
| Upregulated in class | normalThy |
| GeneSet | TSADAC_RKOSILENT_UP |
| Enrichment Score (ES) | -0.8862342 |
| Normalized Enrichment Score (NES) | -1.7122139 |
| Nominal p-value | 0.0 |
| FDR q-value | 0.25490385 |
| FWER p-Value | 0.235 |
| PROBE | DESCRIPTION (from dataset) | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|---|
| 1 | PTPRM | 6370136 | 4382 | 0.207 | -0.2264 | No | ||
| 2 | MCPH1 | 3130356 3850750 6220270 | 5834 | 0.085 | -0.3007 | No | ||
| 3 | PTGS2 | 2510301 3170369 | 6240 | 0.070 | -0.3194 | No | ||
| 4 | LAMA2 | 7040020 | 7536 | 0.037 | -0.3873 | No | ||
| 5 | LPHN2 | 4480010 | 8516 | 0.020 | -0.4391 | No | ||
| 6 | PCDH8 | 2360047 4200452 | 8827 | 0.015 | -0.4551 | No | ||
| 7 | FOLH1 | 3290300 | 9969 | -0.003 | -0.5163 | No | ||
| 8 | KYNU | 1410435 | 10355 | -0.009 | -0.5366 | No | ||
| 9 | SFRP1 | 6980315 | 13466 | -0.084 | -0.7001 | No | ||
| 10 | COL6A3 | 2640717 4070064 5390717 | 14198 | -0.137 | -0.7333 | No | ||
| 11 | CYP4B1 | 2570139 | 14724 | -0.202 | -0.7526 | No | ||
| 12 | LAMA3 | 1190131 5290239 | 15511 | -0.437 | -0.7756 | Yes | ||
| 13 | TIMP2 | 4780609 | 15643 | -0.495 | -0.7607 | Yes | ||
| 14 | TIMP3 | 1450504 1980270 | 15733 | -0.537 | -0.7417 | Yes | ||
| 15 | DNASE1L3 | 670086 | 18422 | -5.221 | -0.6551 | Yes | ||
| 16 | XCL1 | 3800504 | 18537 | -6.532 | -0.3721 | Yes | ||
| 17 | S100A10 | 6350010 | 18596 | -8.500 | 0.0011 | Yes |
