DatasetSet_03_absentNotch_versus_normalThy.phenotype_absentNotch_versus_normalThy.cls
#absentNotch_versus_normalThy.phenotype_absentNotch_versus_normalThy.cls
#absentNotch_versus_normalThy_repos
Phenotypephenotype_absentNotch_versus_normalThy.cls#absentNotch_versus_normalThy_repos
Upregulated in classnormalThy
GeneSetSANSOM_APC_5_DN
Enrichment Score (ES)-0.5537645
Normalized Enrichment Score (NES)-1.6010723
Nominal p-value0.0
FDR q-value0.27470884
FWER p-Value0.946
Table: GSEA Results Summary



Fig 1: Enrichment plot: SANSOM_APC_5_DN   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEDESCRIPTION
(from dataset)
GENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1DDC670408356.8070.0146No
2ABCB9110603 4560592 61103381954.5540.0170No
3C1QB59102922584.1870.0238No
4MGST226501294183.5320.0237No
5SLC11A231406034833.2970.0282No
6HNRPA14670398 50506875653.1240.0314No
7NUDT569404086772.8680.0323No
8POLR2I40604007732.6730.0336No
9GALNT10520315 39900887772.6690.0399No
10IL12RB12230338 54200539272.4060.0376No
11TYROBP22300209392.3880.0428No
12CD82478071110132.2850.0444No
13CXCL13629040210932.1900.0454No
14LRP1627038611182.1660.0493No
15ST3GAL4635002011322.1520.0538No
16PRPSAP1698049413661.8530.0456No
17GSTA4166036914371.7520.0460No
18GPD1248009514441.7440.0499No
19LAT2534044014641.7230.0531No
20MTF25033314671.7200.0572No
21SLC35B15700064 700073514761.7140.0609No
22IL12RB2602046514851.6990.0646No
23SLPI212044614861.6970.0687No
24PTPRC130402 529014815321.6470.0703No
25GSTM11940332 659046316161.5660.0695No
26GPR89A780315 158036816461.5410.0717No
27TGFBI2060446 690011216891.5090.0731No
28ATP2A3130440 219045117051.4950.0759No
29CD64150035 557036817061.4920.0795No
30SIRPA130465 570033218251.3810.0764No
31IGK-V170300 405067318421.3700.0789No
32CD72234036918951.3140.0792No
33LYL1290024219321.2800.0804No
34HAGH54035819401.2730.0831No
35PSMB8285070719601.2550.0851No
36H2-DMB1476002619761.2370.0873No
37SEC14L2264037020371.1910.0869No
38CUL4B690039020721.1620.0879No
39GPX4508043321181.1260.0881No
40MTTP378016121201.1260.0908No
41TGFB1194016221801.0730.0902No
42CXCL14840114 645032422151.0400.0909No
43MERTK642005622591.0240.0910No
44EVI2A684011022831.0140.0922No
45TAX1BP3940706 6100687 622017623281.0000.0922No
46LTB4R177005623490.9960.0936No
47DGAT1185053823830.9780.0941No
48CCL25450541 54043524010.9700.0956No
49SLC35C2770707 569060324490.9420.0953No
501200015F23RIK705067224920.9070.0952No
51GDI14590400 5290358 6020687 618044625020.9020.0969No
52ENTPD5428007025700.8660.0953No
53IGL-V12510725 412003726140.8320.0950No
54TEP1704073527990.7190.0867No
55TCEA3177002029740.6320.0787No
56CYB5A508045030350.6040.0769No
57CHPT14210215 611027330570.5950.0772No
58TCAP489044631140.5640.0755No
59ACY3611036931430.5490.0753No
60SRXN1630731 3130195 448023931730.5360.0750No
61PPAP2A1170397 3440288 393027031980.5270.0750No
62CASP3662039732030.5260.0760No
63NAPSA4810711 591036432340.5120.0756No
64BTD264033832360.5120.0768No
65CITED25670114 513008832370.5110.0781No
66FAHD1467013932680.4990.0776No
67PAPSS287011332730.4970.0786No
68CAPN31980451 694004734500.4320.0701No
69ANK31500161 2900435 4210154 640010035230.4110.0671No
70CD160421037735820.3860.0649No
71KEAP11570121 2900546 384057636100.3800.0643No
72CDKN2B602004036530.3660.0629No
73ABR610079 1170609 3610195 567005036580.3650.0636No
74CASP1236054637000.3520.0622No
75SLC22A18705016837050.3500.0628No
76PDZK1232012837380.3400.0619No
77HIC1265014239160.2960.0529No
78CYP3A251500348 665042739170.2960.0537No
79CDR2620037739250.2920.0540No
80ATP6V0B281011239270.2920.0546No
81PRRG2454009539880.2770.0520No
82CCL21B467017640410.2670.0498No
83SAR1B251027340640.2620.0493No
84CAPN93450097 591068740720.2600.0495No
85RHOC206024240730.2600.0501No
86ADORA2B686025340860.2580.0501No
87G6PC43009340870.2570.0507No
88PLTP630110 130497 405013941340.2490.0488No
89IL18618003941390.2480.0492No
90JAK23780528 6100692 655057741880.2380.0472No
91FLT41240292 635070742030.2350.0470No
92PCOLCE421043342710.2260.0439No
93ENTPD2459073942720.2260.0444No
94LTBP450164 178030143100.2200.0429No
95FAS4480112 611004043840.2070.0394No
96CD22312023944760.1950.0349No
97OLFR91629002045080.1900.0337No
98ITGA3457042746560.1710.0261No
99CENPJ6660551 467059248680.1480.0149No
100CD79A345056348880.1460.0142No
101CLGN591000849130.1440.0132No
102TRIM47508071749710.1380.0104No
103ABP11980609 6005649760.1380.0106No
104NBL1248002149820.1380.0106No
105RGS2109073650600.1320.0067No
106MXI15050064 513048451220.1270.0037No
107ABCC2380202 539030052350.117-0.0022No
108ICAM5235064752830.114-0.0044No
109CD48157064752990.113-0.0050No
110GNAZ613029653630.110-0.0082No
111MGAT3226059353720.109-0.0083No
112ACE1780161 492031555120.100-0.0157No
113CIDEB336027456240.095-0.0216No
114TRFR24760397 529007058730.084-0.0349No
115GPR1261028859390.081-0.0383No
116SLC2A25130537 5720722 677007959540.081-0.0389No
117ABCC3405024259760.080-0.0398No
118LY751990358 459013660150.078-0.0417No
119NFIA2760129 586027862040.071-0.0518No
120MAPRE3705050462250.071-0.0527No
121SIRT263049462630.069-0.0546No
122SLC6A4223037265050.062-0.0676No
123DDR2705027365190.061-0.0682No
124NR1I350026 124067365370.061-0.0690No
125CIDEC345037265470.060-0.0693No
126NCF1385009166580.057-0.0752No
127PAX85050301 529016467490.054-0.0800No
128CNTNAP1665013267570.054-0.0802No
129SEPT4158059367930.053-0.0820No
130GZMA339031569020.050-0.0878No
131TNFRSF17589040871970.043-0.1038No
132PIPOX7075072700.042-0.1076No
133IGJ117054173850.040-0.1138No
134EDN2676064774010.040-0.1145No
135BARX2448027374740.038-0.1183No
136MEP1B1240341 527016875550.037-0.1226No
137RUNX21400193 423021576130.036-0.1257No
138DAB12060193 700060577860.032-0.1350No
139CYP2C40185071178850.030-0.1403No
140MUCDHL572005679260.029-0.1424No
141GGTLA13140273 492016879740.029-0.1449No
142CYP27B15270114 536001079810.028-0.1452No
143SLC4A41780075 1850040 481006880060.028-0.1464No
144RDH767073980900.026-0.1509No
145SLC22A4234070780970.026-0.1512No
146SEC14L12120551 361053781530.025-0.1541No
147DNAJB946011481750.025-0.1552No
148CHRNG586027382590.024-0.1597No
149EDN3269072283420.022-0.1641No
150KCNJ11251013183850.022-0.1664No
151RBP2206009784230.021-0.1683No
152CCK637036885910.019-0.1774No
153NPDC1210044586420.018-0.1801No
154SLC7A95420735 570045086820.017-0.1822No
155COL4A5134016187640.016-0.1866No
156GIP317036490270.011-0.2009No
157PDE9A513016791040.010-0.2050No
158SOX18232008691220.010-0.2060No
159AADAC659063291550.010-0.2077No
160NPR3158023992570.008-0.2132No
161GZMB38006692610.008-0.2133No
162IFNA1539059293100.007-0.2159No
163PTPRE1660286 294009595720.004-0.2302No
164ACOX11170059 394008896850.002-0.2363No
165NKIRAS12510440 557067197310.001-0.2388No
166CLCA3651016797410.001-0.2393No
167MYH14401001797510.001-0.2398No
168FABP1694003597770.000-0.2411No
169GIMAP45570673 65500419892-0.001-0.2474No
170KLRA717801849952-0.003-0.2506No
171DNASE11190167 68405469970-0.003-0.2515No
172REG1740052810063-0.004-0.2566No
1732310016A09RIK264012910118-0.005-0.2595No
174SOD3141048410177-0.006-0.2627No
175BC052328421002510184-0.006-0.2630No
176TPH178018010298-0.008-0.2691No
177AKR1B7539011310309-0.008-0.2697No
178ARG2694046310373-0.009-0.2731No
179GSTT1529052010393-0.009-0.2741No
180SLC2A567027310463-0.010-0.2779No
181CYB5R3430097 686040010496-0.011-0.2796No
182SST659014210702-0.014-0.2908No
183CST738036910774-0.015-0.2946No
184GCG622073510905-0.017-0.3017No
185TLL1268031510919-0.017-0.3024No
186PCSK5572060010979-0.018-0.3055No
187ITGAX613052411006-0.019-0.3069No
188CX3CL1399070711023-0.019-0.3077No
189BMP438011311090-0.020-0.3113No
190ALDOB473032411143-0.021-0.3141No
191ADH4684030111231-0.023-0.3188No
192VDR130156 51043811283-0.024-0.3215No
193MYT1L5670369 666040311308-0.024-0.3228No
194RBP4454013111378-0.026-0.3265No
195SLC5A1247005311396-0.026-0.3274No
196PRLR1980647 199009711405-0.026-0.3278No
197SLC5A11117034811496-0.028-0.3326No
198DPEP1508001411551-0.029-0.3355No
199PPARA206002611553-0.029-0.3355No
200REG3A422020211725-0.032-0.3448No
201CEACAM10473070612017-0.038-0.3606No
202MYO7A281010212051-0.039-0.3623No
203CCNA1629011312062-0.040-0.3627No
204MCPT2534018112126-0.041-0.3661No
205ALB1290030912185-0.043-0.3692No
206GABRB1676019312517-0.051-0.3872No
207MCFD2520576 569001712572-0.052-0.3900No
208DPT567073112780-0.059-0.4012No
209OGN3710326 380019312896-0.062-0.4073No
210TCF21269044613047-0.067-0.4154No
211TMPRSS8662057513130-0.071-0.4197No
212INDO268039013185-0.073-0.4224No
213FABP7459014213314-0.078-0.4293No
214MOGAT26013913371-0.080-0.4321No
215ITGB7467061913597-0.093-0.4442No
216GHRL2360619 676043813928-0.115-0.4620No
217BASP1570004413974-0.118-0.4642No
218NUMB2450735 3800253 635004013996-0.120-0.4650No
219RDH52970736 3940632 5340730 6370093 461005914081-0.127-0.4693No
220MOV1050673 430577 387028014098-0.128-0.4699No
221MCPT1686018114181-0.136-0.4740No
222CYP2S1297072514211-0.138-0.4753No
223PCX269075014212-0.138-0.4750No
2241810010M01RIK124033814228-0.140-0.4754No
225BC0112092360373 633013614302-0.147-0.4791No
226AGR2399016114415-0.158-0.4848No
227ERCC5770025 454069214456-0.162-0.4866No
228UPP13850358 394010014501-0.167-0.4886No
229IGH-VJ55860025 169018414515-0.169-0.4889No
230OGDH3840333 635010014623-0.187-0.4943No
231EPHX2297034114627-0.187-0.4940No
232NR1H34810215 557029214775-0.212-0.5015No
2331810020D17RIK590003515026-0.271-0.5146No
234CASP65690239 642055115076-0.284-0.5166No
235CRAT540020 2060364 352014815138-0.300-0.5192No
236ST8SIA42680605 306021515148-0.303-0.5189No
237GRINA457051915172-0.313-0.5194No
238PPAPDC1A456001715177-0.315-0.5189No
239PAFAH23140451 5720593 651001415254-0.341-0.5222No
240COL18A1610301 457033815369-0.378-0.5275No
241SLC27A4406013915415-0.396-0.5290No
242SMPD2237013315435-0.406-0.5291No
243SULT2B13360484 481018115445-0.410-0.5286No
244SOAT21230324 361060315566-0.458-0.5340No
245POU2AF1569024215688-0.514-0.5394No
246ACP5223071715717-0.529-0.5396No
2479830147J24RIK269045115751-0.544-0.5401No
248ITGAE4210632 4670239 5340253 5420746 5690154 5700685 677015415760-0.549-0.5392No
249CPT23940504 618007515833-0.582-0.5418No
250ZDHHC14378045815905-0.622-0.5441No
251A230106M15RIK527043515922-0.629-0.5435No
252LAPTM5555037216079-0.715-0.5503No
253ZAP701410494 226050416100-0.731-0.5496No
254VAV23610725 589071716146-0.756-0.5502No
255WDTC1169054116212-0.810-0.5518Yes
256SLC7A8380136 569067216227-0.822-0.5506Yes
257USP21190292 1240253 485003516232-0.826-0.5488Yes
258ICOS119004816269-0.855-0.5487Yes
259ABHD8666008216281-0.861-0.5472Yes
260CLCN2194002116290-0.869-0.5455Yes
261FGD3569046516310-0.885-0.5444Yes
262KLRB1C405002216331-0.898-0.5433Yes
263CD7314046516392-0.936-0.5443Yes
264CYP4F13317013216405-0.941-0.5427Yes
265ATP6V0A11570082 3870441 423004416430-0.962-0.5416Yes
266SPHK22030487 4120670 485011416453-0.979-0.5405Yes
267THEM2684074616463-0.983-0.5386Yes
268CGGBP1481005316516-1.010-0.5390Yes
269GGT161008216532-1.022-0.5373Yes
270XDH684044616546-1.029-0.5355Yes
271NDFIP2407045116720-1.170-0.5421Yes
272FLT3L513009216767-1.222-0.5417Yes
273GNPDA1580181 5220112 84073116798-1.253-0.5403Yes
274ANXA6219001416831-1.281-0.5389Yes
275IRF461013317043-1.501-0.5468Yes
276TOB1415013817080-1.548-0.5450Yes
277ATP6V0A2405012917084-1.552-0.5414Yes
278SETDB184009317088-1.556-0.5378Yes
279IKBKE185033217111-1.591-0.5351Yes
280ARHGDIB473043317124-1.603-0.5319Yes
281GALM73036817146-1.632-0.5290Yes
282IL2RB473007217155-1.650-0.5255Yes
283IRF12340152 3450592 6290121 698057717156-1.653-0.5215Yes
2841810046J19RIK383007017171-1.669-0.5182Yes
285STK102760010 394060517204-1.711-0.5158Yes
286SIPA1522068717208-1.715-0.5117Yes
287RASSF22480079 572054617254-1.776-0.5099Yes
288VAMP5383030017278-1.802-0.5068Yes
289ADIPOR2151003517288-1.810-0.5029Yes
290RFXANK401034117330-1.859-0.5006Yes
291MAP3K1536034717339-1.868-0.4965Yes
292DGKA5720152 589032817359-1.901-0.4929Yes
293MGST33450338 529073617445-2.055-0.4925Yes
294SDF4344051917482-2.108-0.4894Yes
2955730469M10RIK508059317540-2.194-0.4872Yes
296GNA112760156 6550671 710006817582-2.284-0.4839Yes
297BCAT2589011217613-2.334-0.4798Yes
298ZNF467677037217642-2.384-0.4756Yes
299DTX1590037217731-2.550-0.4742Yes
300CD281400739 421009317736-2.566-0.4682Yes
301ARSA557071717809-2.702-0.4655Yes
302PIK3CD306054617832-2.774-0.4600Yes
303FMNL1586034717846-2.796-0.4539Yes
304RAC2158054117882-2.881-0.4488Yes
305CD243067217910-2.930-0.4432Yes
306SELPL177016717951-3.035-0.4380Yes
307RRAGD67007517970-3.093-0.4314Yes
3086330412F12RIK124044617990-3.152-0.4248Yes
309ABCD1567037318027-3.279-0.4188Yes
310ITGB2638034818049-3.332-0.4118Yes
311IL4I1319016118064-3.382-0.4044Yes
312TCTA268068718070-3.421-0.3963Yes
313DHRS1522067318102-3.546-0.3894Yes
314VAV1602048718137-3.653-0.3824Yes
315ATP1B1313059418145-3.686-0.3738Yes
316CD53555016218151-3.708-0.3651Yes
317GPSM3269015418155-3.733-0.3561Yes
318ADAM19534007518159-3.747-0.3472Yes
319ITGAL145032418187-3.859-0.3393Yes
320TRP53INP2269043518192-3.868-0.3301Yes
321WBP2317012818235-4.053-0.3225Yes
322S100A1352001918253-4.158-0.3134Yes
323CD3D281073918306-4.485-0.3053Yes
324H2-K158033218347-4.694-0.2961Yes
325RORC174012118360-4.769-0.2851Yes
326CTSW36036818365-4.804-0.2737Yes
327INPP5D345073118409-5.157-0.2635Yes
328CD3E380005618448-5.536-0.2521Yes
329CYFIP2520577 604030018450-5.565-0.2386Yes
330TM4SF5312028018457-5.598-0.2253Yes
331ST6GAL1297054618478-5.799-0.2123Yes
332RGS10234029218514-6.262-0.1990Yes
333ICAM2640011318525-6.392-0.1840Yes
334CD52591024218534-6.522-0.1686Yes
335CASP7421015618553-6.793-0.1531Yes
336CD3G268028818554-6.817-0.1365Yes
337CDKN2D604003518565-7.056-0.1199Yes
338CCL5371039718577-7.590-0.1020Yes
339CD79B1450066 339035818585-8.079-0.0827Yes
340CORO1A3140609 3190020 319003718587-8.096-0.0631Yes
341LSP1235009118599-8.637-0.0427Yes
342IGH-65720193 655007518601-8.814-0.0213Yes
343CD5659033818606-9.0830.0005Yes
Table: GSEA details [plain text format]



Fig 2: SANSOM_APC_5_DN   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: SANSOM_APC_5_DN: Random ES distribution   
Gene set null distribution of ES for SANSOM_APC_5_DN