Details for gene set PENG_RAPAMYCIN

Table: GSEA Results Summary

Dataset	Set_03_absentNotch_versus_normalThy.phenotype_absentNotch_versus_normalThy.cls #absentNotch_versus_normalThy.phenotype_absentNotch_versus_normalThy.cls #absentNotch_versus_normalThy_repos
Phenotype	phenotype_absentNotch_versus_normalThy.cls#absentNotch_versus_normalThy_repos
Upregulated in class	normalThy
GeneSet	PENG_RAPAMYCIN_UP
Enrichment Score (ES)	-0.58485764
Normalized Enrichment Score (NES)	-1.592748
Nominal p-value	0.0
FDR q-value	0.24416794
FWER p-Value	0.966

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	EIF3S6	2640685	151	4.862	0.0178	No
2	DRAP1	2940142	248	4.243	0.0353	No
3	QSCN6	3120441	785	2.651	0.0205	No
4	MTMR2	2260148 3990139	862	2.508	0.0298	No
5	DDX46	1450167	956	2.357	0.0374	No
6	IDH2	2680397	988	2.315	0.0480	No
7	ALDH2	4230019	1147	2.123	0.0508	No
8	TOP2A	360717	1230	2.022	0.0572	No
9	AP4M1	70609 3440128	1375	1.841	0.0593	No
10	ACADVL	6040403	1404	1.795	0.0674	No
11	ATP2A3	130440 2190451	1705	1.495	0.0591	No
12	HIST1H3H	2760288	1910	1.305	0.0551	No
13	HAGH	540358	1940	1.273	0.0603	No
14	HIST1H2BK	6130433	1965	1.250	0.0657	No
15	TP53	6130707	1986	1.229	0.0712	No
16	FKBP8	4060019	2092	1.148	0.0716	No
17	LY86	2230093	2130	1.115	0.0756	No
18	CSNK1G2	3060095 4730037	2377	0.980	0.0675	No
19	RQCD1	1850139	2479	0.916	0.0669	No
20	SURF1	5130048	2596	0.845	0.0652	No
21	HIST1H2BN	730128	2604	0.839	0.0693	No
22	BNIP3L	1940347	2743	0.751	0.0658	No
23	CIRBP	1850408	2924	0.661	0.0596	No
24	TK1	540014 540494 6760152	3070	0.589	0.0549	No
25	HMG20B	2450465	3181	0.533	0.0518	No
26	SSTR2	4590687	3256	0.503	0.0505	No
27	CAMK1	3390427 5220086 6940504	3557	0.395	0.0364	No
28	NOTCH4	2450040 6370707	3682	0.357	0.0316	No
29	CDT1	3780682	3991	0.277	0.0164	No
30	MYC	380541 4670170	4017	0.274	0.0165	No
31	PLTP	630110 130497 4050139	4134	0.249	0.0116	No
32	TCF20	1190338 1240520 4070594 4810440	4355	0.214	0.0008	No
33	SPOCK2	6650369	4374	0.209	0.0010	No
34	CD22	3120239	4476	0.195	-0.0035	No
35	HMGCL	2510161 3870524	4634	0.173	-0.0110	No
36	RTN2	4480538	4689	0.167	-0.0131	No
37	HMMR	5720315 6380168	4962	0.139	-0.0270	No
38	CD48	1570647	5299	0.113	-0.0446	No
39	SASH1	4070270	5324	0.112	-0.0453	No
40	UBE2J1	4070133	5865	0.084	-0.0741	No
41	RGS13	3780722	6525	0.061	-0.1094	No
42	FUCA1	610075	6610	0.059	-0.1137	No
43	GNB3	1230167	7190	0.044	-0.1448	No
44	CENPF	5050088	7396	0.040	-0.1556	No
45	BRD8	1170463 2900075 4050397 6590332	7652	0.035	-0.1693	No
46	ASCL1	6650100	7763	0.033	-0.1750	No
47	RASGRP3	6020504	7944	0.029	-0.1846	No
48	IFIT1	5270373	8156	0.025	-0.1959	No
49	CCNG1	870402 1500685 6110594	8330	0.023	-0.2051	No
50	CFLAR	2320605 6180440	8562	0.019	-0.2175	No
51	GPX6	6370575	8929	0.013	-0.2373	No
52	MS4A2	2940594	9020	0.012	-0.2421	No
53	PTPRH	3870070	9344	0.007	-0.2595	No
54	RBMS3	6110722	9421	0.006	-0.2636	No
55	FAIM2	2100014	9836	-0.001	-0.2860	No
56	MUSK	1190113	10174	-0.006	-0.3042	No
57	ENPP2	5860546	10196	-0.006	-0.3053	No
58	CRHR2	4590672	10741	-0.014	-0.3347	No
59	GRINL1A	6350128	11314	-0.024	-0.3655	No
60	DMBT1	7050270	12154	-0.042	-0.4107	No
61	DAAM1	1500273	12183	-0.043	-0.4120	No
62	KCNMB1	4760139	12538	-0.051	-0.4309	No
63	MDM4	4070504 4780008	12904	-0.062	-0.4503	No
64	MEG3	360193 6900725	13614	-0.094	-0.4881	No
65	MS4A1	4210598	13865	-0.110	-0.5011	No
66	BASP1	5700044	13974	-0.118	-0.5063	No
67	TRO	1980113	13989	-0.120	-0.5064	No
68	BTG2	2350411	14023	-0.122	-0.5075	No
69	TCL1A	3420367	14255	-0.143	-0.5193	No
70	ARHGAP1	2810010 5270064	14656	-0.191	-0.5399	No
71	CBLB	3520465 4670348	14969	-0.256	-0.5554	No
72	CRAT	540020 2060364 3520148	15138	-0.300	-0.5629	No
73	AES	6550333 6180484	15265	-0.345	-0.5679	No
74	BRF1	2100047	15278	-0.349	-0.5667	No
75	BCKDHA	50189	15333	-0.367	-0.5676	No
76	POU2F2	4590411	15363	-0.376	-0.5672	No
77	FANCG	4010471	15515	-0.438	-0.5730	No
78	MYO1F	6100546	15611	-0.478	-0.5756	No
79	CLOCK	1410070 2940292 3390075	15618	-0.480	-0.5734	No
80	KIFAP3	3800524 4590082 6940075	15686	-0.514	-0.5742	No
81	POU2AF1	5690242	15688	-0.514	-0.5715	No
82	LTA	1740088	15843	-0.586	-0.5767	No
83	TBC1D1	2510072	15994	-0.672	-0.5813	Yes
84	JAK1	5910746	15995	-0.673	-0.5777	Yes
85	PDLIM1	450100	16060	-0.702	-0.5774	Yes
86	LAPTM5	5550372	16079	-0.715	-0.5745	Yes
87	RPA3	5700136	16147	-0.757	-0.5741	Yes
88	ERCC1	3800010 4590132 4670397	16148	-0.757	-0.5701	Yes
89	ROCK1	130044	16180	-0.781	-0.5676	Yes
90	EDG5	2640300	16299	-0.875	-0.5693	Yes
91	PRKCB1	870019 3130092	16350	-0.909	-0.5671	Yes
92	HBP1	2510102 3130010 4210619	16493	-0.998	-0.5695	Yes
93	LRMP	6290193	16541	-1.027	-0.5665	Yes
94	ZFP36L1	2510138 4120048	16590	-1.054	-0.5635	Yes
95	DVL1	5900450 6510162	16597	-1.058	-0.5581	Yes
96	CUTL1	1570113 1770091 1850273 2100286 5340605	16627	-1.087	-0.5539	Yes
97	IFNGR2	1500288 2100176	16731	-1.179	-0.5532	Yes
98	PSCD1	110113 2470592	16819	-1.269	-0.5511	Yes
99	HMGCS2	770725	16845	-1.298	-0.5455	Yes
100	PDK2	2690017	16873	-1.327	-0.5399	Yes
101	PTPN18	2640537	16880	-1.333	-0.5331	Yes
102	ATP6AP1	2350541	16897	-1.347	-0.5267	Yes
103	TAF10	2760020	17007	-1.459	-0.5248	Yes
104	PIK3CG	5890110	17009	-1.462	-0.5171	Yes
105	GMDS	1050519	17063	-1.529	-0.5118	Yes
106	ATP6V0A2	4050129	17084	-1.552	-0.5046	Yes
107	MUTYH	1780441 5700121	17125	-1.604	-0.4981	Yes
108	CTDSP2	5340315 5690133	17252	-1.772	-0.4955	Yes
109	LANCL1	1770079 6420670	17297	-1.819	-0.4881	Yes
110	EPS15	4200215	17325	-1.854	-0.4797	Yes
111	HDAC5	2370035 6370139	17327	-1.856	-0.4698	Yes
112	RHBDL1	1500736	17386	-1.956	-0.4625	Yes
113	BRD3	6130672	17388	-1.959	-0.4521	Yes
114	GNG10	3450551	17450	-2.060	-0.4444	Yes
115	PPP2R5A	1990497	17456	-2.071	-0.4336	Yes
116	BCL7A	4560095	17464	-2.084	-0.4228	Yes
117	TOP3B	1170102	17496	-2.119	-0.4132	Yes
118	RELB	1400048	17503	-2.129	-0.4021	Yes
119	UROS	3360139 4120133	17625	-2.353	-0.3961	Yes
120	ARPC3	670441	17733	-2.560	-0.3882	Yes
121	H2AFX	3520082	17782	-2.659	-0.3765	Yes
122	UCP2	2190050 4070711	17943	-3.001	-0.3692	Yes
123	DOK2	5340273	18001	-3.196	-0.3551	Yes
124	STAT2	3780519	18002	-3.197	-0.3381	Yes
125	ADA	2120403 3130075	18104	-3.550	-0.3245	Yes
126	POLD4	2320082	18129	-3.623	-0.3065	Yes
127	CD53	5550162	18151	-3.708	-0.2878	Yes
128	IL2RG	4120273	18179	-3.829	-0.2688	Yes
129	CD37	770273	18246	-4.132	-0.2502	Yes
130	TAZ	7100193	18300	-4.463	-0.2293	Yes
131	GMPR	3990022	18309	-4.502	-0.2056	Yes
132	BCL6	940100	18378	-4.903	-0.1831	Yes
133	IL4R	2370520	18458	-5.600	-0.1574	Yes
134	TNFRSF1A	1090390 6520735	18474	-5.755	-0.1275	Yes
135	KCNH2	1170451	18497	-6.062	-0.0962	Yes
136	RGS10	2340292	18514	-6.262	-0.0636	Yes
137	PTK2B	4730411	18527	-6.405	-0.0300	Yes
138	MAP4K2	4200037	18533	-6.506	0.0045	Yes