Details for gene set PENG_RAPAMYCIN

Table: GSEA Results Summary

Dataset	Set_03_absentNotch_versus_normalThy.phenotype_absentNotch_versus_normalThy.cls #absentNotch_versus_normalThy.phenotype_absentNotch_versus_normalThy.cls #absentNotch_versus_normalThy_repos
Phenotype	phenotype_absentNotch_versus_normalThy.cls#absentNotch_versus_normalThy_repos
Upregulated in class	absentNotch
GeneSet	PENG_RAPAMYCIN_DN
Enrichment Score (ES)	0.6483013
Normalized Enrichment Score (NES)	1.7971191
Nominal p-value	0.0
FDR q-value	0.00597021
FWER p-Value	0.029

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	PFKM	1990156 5720168	11	8.531	0.0312	Yes
2	SLC7A5	3310746	74	5.652	0.0490	Yes
3	C1QBP	3170452	88	5.442	0.0686	Yes
4	CCT6A	2350368	104	5.267	0.0874	Yes
5	RARS	380390	105	5.267	0.1071	Yes
6	SLC29A1	2970379	131	5.040	0.1245	Yes
7	CYC1	2850546	154	4.832	0.1414	Yes
8	FASN	430717	160	4.787	0.1590	Yes
9	NARS	1660722	202	4.500	0.1735	Yes
10	MRPL12	3120112	204	4.467	0.1901	Yes
11	AATF	5220575	212	4.422	0.2063	Yes
12	TFRC	4050551	213	4.421	0.2228	Yes
13	PA2G4	2030463	218	4.396	0.2389	Yes
14	PSMD14	5690593	291	4.035	0.2501	Yes
15	DDX21	6100446	298	3.996	0.2647	Yes
16	BCS1L	5360102	301	3.969	0.2794	Yes
17	NOL5A	5570139	312	3.941	0.2936	Yes
18	EIF3S9	2030068 2120044	317	3.923	0.3080	Yes
19	ATF5	5670685	337	3.821	0.3212	Yes
20	DDX3X	2190020	355	3.736	0.3342	Yes
21	NOL1	4570576 4920044	405	3.564	0.3449	Yes
22	GCN5L2	2340609	414	3.542	0.3576	Yes
23	FKBP4	870035	434	3.492	0.3696	Yes
24	NME1	770014	457	3.394	0.3811	Yes
25	ETF1	6770075	490	3.269	0.3916	Yes
26	SCD	2680441	508	3.238	0.4027	Yes
27	TIMM17A	130092	530	3.187	0.4135	Yes
28	HSPE1	3170438	569	3.119	0.4231	Yes
29	GM2A	430095	621	2.981	0.4314	Yes
30	IDH3A	460332	630	2.963	0.4421	Yes
31	PSMD8	630142	645	2.912	0.4522	Yes
32	UBE2M	2450215	696	2.835	0.4600	Yes
33	SRM	1850097 2480162	698	2.834	0.4706	Yes
34	CCT4	6380161	744	2.730	0.4783	Yes
35	SF3A3	6660603	793	2.637	0.4855	Yes
36	NMT1	5810152	836	2.551	0.4928	Yes
37	CTPS	70451 1740132	844	2.532	0.5018	Yes
38	CSE1L	3850086	848	2.524	0.5111	Yes
39	MRPS12	4210707 6110341	863	2.507	0.5197	Yes
40	GLO1	7040692	922	2.419	0.5256	Yes
41	CCT5	1050670	965	2.341	0.5320	Yes
42	IFI30	730309 2940500	996	2.308	0.5390	Yes
43	CYCS	2030072	1055	2.235	0.5442	Yes
44	RAE1	7050121	1136	2.145	0.5479	Yes
45	PITPNB	5130039	1240	2.015	0.5498	Yes
46	TOMM40	6110017	1256	1.984	0.5564	Yes
47	USP10	2030736 2450333	1336	1.897	0.5592	Yes
48	CCNC	3390750	1347	1.885	0.5657	Yes
49	ICT1	430138	1377	1.840	0.5710	Yes
50	EIF2B2	4290048	1384	1.830	0.5775	Yes
51	AK2	4590458 4760195 6110097	1395	1.814	0.5837	Yes
52	PSMC2	7040010	1411	1.790	0.5896	Yes
53	ETFA	50347 5690040 6370044	1469	1.719	0.5929	Yes
54	EIF4G1	4070446	1608	1.575	0.5913	Yes
55	ASNS	110368 7100687	1621	1.564	0.5965	Yes
56	PSMB5	6290242	1644	1.542	0.6011	Yes
57	CCT2	1690113	1716	1.480	0.6027	Yes
58	UBE2L3	1690707 5900242	1775	1.423	0.6049	Yes
59	CDC25A	3800184	1784	1.416	0.6097	Yes
60	TCP1	2450100 5130524	1856	1.357	0.6110	Yes
61	HYOU1	3060465	1911	1.304	0.6129	Yes
62	GSPT1	5420050	1973	1.241	0.6142	Yes
63	PRDX3	1690035	2094	1.147	0.6120	Yes
64	TIMM44	4670746 4730050	2145	1.099	0.6134	Yes
65	WBSCR22	3130070 4120551 5570433	2202	1.051	0.6143	Yes
66	MORF4L2	6450133	2235	1.032	0.6164	Yes
67	EMP3	1500722 1570039	2248	1.027	0.6196	Yes
68	TRIP13	6860341	2261	1.023	0.6227	Yes
69	PGAM1	2570133	2265	1.021	0.6264	Yes
70	CTSC	2230739 4670408	2340	0.998	0.6261	Yes
71	AHSA1	2030520	2391	0.974	0.6270	Yes
72	RTN4	50725 630647 870097 870184	2392	0.973	0.6306	Yes
73	KPNA3	7040088	2411	0.963	0.6333	Yes
74	EXTL3	540309 3130215 5860500	2421	0.959	0.6364	Yes
75	NDUFA9	2260280	2432	0.951	0.6394	Yes
76	BTK	3130044	2440	0.945	0.6425	Yes
77	COX7B	2340504	2503	0.901	0.6425	Yes
78	S100A4	3780113	2536	0.881	0.6441	Yes
79	NUP98	2850465	2553	0.874	0.6465	Yes
80	DHCR24	840600 1050672 6290097	2673	0.795	0.6430	Yes
81	HSPA5	5130671	2708	0.771	0.6440	Yes
82	MLF2	1940176	2730	0.761	0.6457	Yes
83	IDH3B	5690070	2811	0.714	0.6440	Yes
84	EEF1E1	4540711	2850	0.695	0.6446	Yes
85	GORASP2	2970059 4060309 7040706	2875	0.681	0.6458	Yes
86	YARS	70739	2877	0.681	0.6483	Yes
87	TUBG1	3140204	2999	0.621	0.6441	No
88	BMP1	380594 2940576 3710593	3000	0.621	0.6464	No
89	COPB2	610154	3040	0.602	0.6465	No
90	PPP2R2A	2900014 5700575	3120	0.561	0.6443	No
91	EIF4G2	3800575 6860184	3224	0.516	0.6407	No
92	TARS	50440 1340086	3316	0.481	0.6375	No
93	PPIB	4280450	3384	0.454	0.6356	No
94	COX11	1580121	3385	0.454	0.6373	No
95	SDHB	3120398 4780113 3710435	3444	0.435	0.6358	No
96	CALU	2680403 3520056 4610348 5720176 6130121	3461	0.429	0.6365	No
97	RBBP6	2320129	3493	0.418	0.6364	No
98	SLC3A2	5270358	3507	0.415	0.6372	No
99	CHUK	7050736	3694	0.353	0.6284	No
100	MAPKAPK3	630520	4038	0.269	0.6109	No
101	RAB1A	2370671	4090	0.257	0.6090	No
102	ARF1	3840291	4205	0.235	0.6037	No
103	SLC1A5	670133 3140020	4244	0.230	0.6025	No
104	AMD1	6290128	4387	0.206	0.5956	No
105	ATP1B3	6040128	4439	0.200	0.5936	No
106	RPS26	510139	4569	0.182	0.5873	No
107	PTBP1	4070736	4661	0.171	0.5830	No
108	ATP5G3	4230551	4782	0.156	0.5771	No
109	RNASEH1	3840575	4818	0.153	0.5757	No
110	SYNCRIP	1690195 3140113 4670279	5008	0.136	0.5660	No
111	PGK1	1570494 630300	5308	0.113	0.5502	No
112	PPIF	1740059	5462	0.104	0.5423	No
113	DAP3	1660528 2120039 5420593	5537	0.099	0.5387	No
114	PICALM	1940280	5577	0.097	0.5369	No
115	VCP	5340168	5982	0.079	0.5153	No
116	IDI1	1450736	6330	0.067	0.4967	No
117	PTDSS1	6020215	7089	0.046	0.4558	No
118	PTRF	2260204	7390	0.040	0.4397	No
119	DNAJA1	1660010 2320358 6840136	7463	0.039	0.4359	No
120	ACVRL1	3290600	8293	0.023	0.3911	No
121	HSPA8	2120315 1050132 6550746	8542	0.020	0.3777	No
122	INPP5E	6100619	8588	0.019	0.3753	No
123	POLR2B	3780138	8831	0.015	0.3623	No
124	BCAP31	1190520	8865	0.014	0.3605	No
125	ARMET	5130670	9005	0.012	0.3530	No
126	UCHL1	1230066	9276	0.008	0.3384	No
127	HCCS	670397 3170341	9717	0.001	0.3146	No
128	PHB	2260739	9723	0.001	0.3143	No
129	GTF2A2	2230184	10188	-0.006	0.2892	No
130	SREBF1	4780333	10335	-0.008	0.2813	No
131	BYSL	3170110	10663	-0.013	0.2636	No
132	WDR18	6020102	10855	-0.016	0.2533	No
133	TDG	2900358 2940079	11082	-0.020	0.2412	No
134	PSMD5	3940139 4570041	11087	-0.020	0.2410	No
135	MYCBP	4280528	11567	-0.029	0.2152	No
136	RTCD1	7000041	12089	-0.040	0.1871	No
137	MMP15	5900717	12443	-0.049	0.1681	No
138	PAPOLA	4200286 4850112	12868	-0.061	0.1454	No
139	P2RX5	5570427 6130435	13493	-0.086	0.1118	No
140	WNT10B	510050	13670	-0.097	0.1027	No
141	NP	2630577 3120142 5670068 6290039	13811	-0.106	0.0955	No
142	CAPZA2	110427 4590064	13880	-0.111	0.0922	No
143	GCDH	2190324 4280347	14080	-0.127	0.0819	No
144	SLC39A14	670300 1400093 1990711	14481	-0.165	0.0608	No
145	SNRPA1	1050735 6110131	14482	-0.165	0.0614	No
146	ATP6V0C	1780609	14595	-0.182	0.0560	No
147	EBNA1BP2	50369 1400433 6040019	14634	-0.189	0.0547	No
148	RABGGTB	3120037	15087	-0.288	0.0313	No
149	PSMD11	2340538 6510053	15242	-0.337	0.0242	No
150	ACAT2	2680400 3610440	15689	-0.515	0.0019	No
151	CDK4	540075 4540600	15811	-0.575	-0.0025	No
152	EIF2B4	5270082	15877	-0.605	-0.0038	No
153	ADRM1	670333 5690162	15971	-0.656	-0.0064	No
154	RAB14	6860139	16004	-0.676	-0.0056	No
155	SQLE	50180 940092	16108	-0.736	-0.0084	No
156	HSPA4	1050170 3450309	16426	-0.960	-0.0220	No
157	JTB	6980400	16573	-1.040	-0.0260	No
158	PTPN1	2650056	16711	-1.164	-0.0291	No
159	NPM3	3610300	16770	-1.225	-0.0277	No
160	NXF1	1570377	16948	-1.400	-0.0321	No
161	CHERP	1240594	17038	-1.493	-0.0313	No
162	ALDH4A1	2450450	17083	-1.551	-0.0279	No
163	EBP	2760292	17153	-1.644	-0.0255	No
164	NDUFS3	1690136 5340528	17216	-1.726	-0.0225	No
165	LIMK2	2650446 4050164	17428	-2.030	-0.0263	No
166	CD47	1850603	17647	-2.386	-0.0292	No
167	GOT2	4570164 5220450	17872	-2.859	-0.0307	No
168	XPO6	3940019	17891	-2.889	-0.0209	No
169	GTF3C1	1990368 4210037	18332	-4.592	-0.0276	No
170	PIP5K1A	4560672	18356	-4.744	-0.0112	No
171	XBP1	3840594	18551	-6.754	0.0035	No