DatasetSet_03_absentNotch_versus_normalThy.phenotype_absentNotch_versus_normalThy.cls
#absentNotch_versus_normalThy.phenotype_absentNotch_versus_normalThy.cls
#absentNotch_versus_normalThy_repos
Phenotypephenotype_absentNotch_versus_normalThy.cls#absentNotch_versus_normalThy_repos
Upregulated in classabsentNotch
GeneSetHUMAN_MITODB_6_2002
Enrichment Score (ES)0.6178283
Normalized Enrichment Score (NES)1.8301612
Nominal p-value0.0
FDR q-value0.007275469
FWER p-Value0.014
Table: GSEA Results Summary



Fig 1: Enrichment plot: HUMAN_MITODB_6_2002   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEDESCRIPTION
(from dataset)
GENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1TIMM10610070 1450019111.7090.0235Yes
2MRPL49460541 610162 5340156138.3950.0398Yes
3SHMT21850180 6040010426.5810.0515Yes
4TIMM132450601625.9240.0624Yes
5BAX3830008755.6390.0731Yes
6SHMT159001321125.1950.0816Yes
7HLCS20605371285.0580.0910Yes
8CYC128505461544.8320.0993Yes
9MRPS153840280 53605041644.7630.1084Yes
10RPS3A24700861664.7470.1179Yes
11ATP5G152900191714.6880.1271Yes
12MRPS2822303731754.6810.1364Yes
13MRPS18B55700861764.6710.1458Yes
14ATP5G28400681834.6280.1548Yes
15MRPS747302701994.5220.1631Yes
16MRPL1231201122044.4670.1718Yes
17SOD214100532054.4540.1808Yes
18CLPP65201022194.3950.1889Yes
19TRAP160401682284.3270.1972Yes
20SLC25A11130097 7706852324.3190.2057Yes
21GLUD142103722374.2780.2141Yes
22ENDOG36107352464.2580.2223Yes
23MRPL111102152564.1990.2302Yes
24GPT23502702614.1760.2384Yes
25SLC25A1721003692644.1630.2467Yes
26ABCB663501382924.0310.2533Yes
27BCS1L53601023013.9690.2609Yes
28COX1523604023423.7830.2663Yes
29SLC25A1014006093513.7520.2734Yes
30MRPL2026404944803.3130.2731Yes
31COX5A14506095043.2470.2784Yes
32GSR35200795233.2060.2838Yes
33TIMM17A1300925303.1870.2899Yes
34MRPS18A67704335343.1810.2962Yes
35NDUFA1055703475383.1730.3024Yes
36VDAC270002155603.1290.3075Yes
37CLN37803685623.1270.3138Yes
38HSPE131704385693.1190.3197Yes
39DHODH31700725843.0860.3252Yes
40NME43140736 59004465893.0670.3311Yes
41MRPL426800505943.0620.3371Yes
42COQ731906325953.0610.3432Yes
43IDH3A4603326302.9630.3473Yes
44SLC25A36701126312.9540.3533Yes
45ACAA21570347 2360324 61301396482.9060.3583Yes
46GCAT52706726562.8930.3637Yes
47SLC25A154640368 55500646912.8460.3676Yes
48MRPS3052206727002.8260.3728Yes
49TXN220304027122.7940.3778Yes
50PMPCB19406707422.7320.3818Yes
51NDUFB822604507682.6790.3858Yes
52MBD361303648102.5940.3888Yes
53COX6A21302158162.5850.3937Yes
54TIMM8A1102798372.5480.3977Yes
55PYCR161806708382.5450.4028Yes
56MRPS113130270 66607358562.5120.4070Yes
57MRPS124210707 61103418632.5070.4117Yes
58ACO242306008882.4670.4153Yes
59MDH218506018982.4510.4198Yes
60HTATSF11100269022.4470.4245Yes
61SUPV3L111700729102.4400.4291Yes
62TOMM2212401429112.4380.4340Yes
63ABCF2630040 3140035 64506019792.3250.4350Yes
64IDH226803979882.3150.4392Yes
65ETFB269002510042.2960.4430Yes
66BID4590592 613000810472.2410.4452Yes
67PCCB5067010502.2380.4496Yes
68CYCS203007210552.2350.4539Yes
69MRPS102060315 4880300 604004710602.2300.4582Yes
70MRPL4636073610662.2260.4624Yes
71SDHC3140347 610015610822.2070.4660Yes
72BLVRA36008810852.2030.4703Yes
73DNM1L344016211102.1730.4734Yes
74ACADS11074611212.1620.4772Yes
75MTERF665044111232.1600.4815Yes
76NDUFS24850020 620040211352.1450.4852Yes
77ALDH2423001911472.1230.4889Yes
78UQCR613002511602.1070.4925Yes
79MRPS352370603 407055111902.0730.4950Yes
80MPST638037311922.0700.4992Yes
81FPGS380309 1230465 383018012202.0400.5018Yes
82MRPS27485054612322.0200.5052Yes
83MRPS34570054112451.9990.5086Yes
84MRPS18C676004412511.9950.5124Yes
85TOMM40611001712561.9840.5161Yes
86MRPL22640052012741.9680.5192Yes
87PPID268070712831.9610.5227Yes
88MRPL17412014812891.9560.5263Yes
89UQCRC152005313001.9400.5297Yes
90COX10314013613241.9070.5323Yes
91SLC25A1405040213301.9020.5358Yes
92ABCB7415032413351.8980.5394Yes
93UQCRB145004713711.8490.5412Yes
94MRPL16406007913741.8450.5448Yes
95ATP5C1591060113871.8280.5479Yes
96AK24590458 4760195 611009713951.8140.5511Yes
97IVNS1ABP4760601 652011313991.8020.5546Yes
98ACADVL604040314041.7950.5580Yes
99VDAC3539008814591.7290.5585Yes
100ETFA50347 5690040 637004414691.7190.5615Yes
101MRPL34352060514751.7150.5647Yes
102NDUFA6399034815041.6710.5665Yes
103NDUFS5401069215951.5800.5647Yes
104CS508060016231.5620.5664Yes
105SARDH306004416501.5390.5681Yes
106TUFM329068516881.5100.5691Yes
107NDUFA8346049117271.4660.5700Yes
108MRPS16251039017291.4650.5729Yes
109GOT1294046517381.4580.5754Yes
110FIBP251045017471.4480.5778Yes
111ATP5E412041118181.3850.5768Yes
112NDUFB511068518231.3820.5794Yes
113SLC25A4236051918271.3800.5820Yes
114MTHFD2380041118451.3680.5838Yes
115TOMM70A78011418551.3580.5860Yes
116WARS2840605 459028018581.3560.5887Yes
117ATP5J2263070619061.3080.5887Yes
118COX6C140002019181.2980.5907Yes
119ALAS1640044019251.2920.5930Yes
120PIN4237032420251.1980.5900Yes
121NDUFB2123075020821.1560.5893Yes
122PRDX3169003520941.1470.5910Yes
123GPX4508043321181.1260.5920Yes
124TIMM444670746 473005021451.0990.5928Yes
125CLPX622015621501.0960.5947Yes
126MRPL35199067121821.0710.5952Yes
127DLST232072221871.0620.5971Yes
128HSPD160097 203045122311.0330.5968Yes
129ECHS1297018422551.0250.5976Yes
130SDHD257012822601.0230.5995Yes
131CPT1B940086 269043322701.0190.6010Yes
132MRPS31130411 1980348 478013823161.0010.6006Yes
133PPM2C336020923310.9990.6018Yes
134ATP5J4210100 690028823430.9970.6032Yes
135ACP6555012823850.9770.6030Yes
136NDUFA9226028024320.9510.6024Yes
137ATP5D655016724420.9440.6038Yes
138COX7C247004724640.9310.6045Yes
139MTCH12370398 294001924770.9210.6057Yes
140NDUFS7174014224820.9140.6073Yes
141ATP5F1700072524960.9050.6084Yes
142COX7B234050425030.9010.6099Yes
143AFG3L2513033225120.8970.6113Yes
144DLAT43045225400.8800.6116Yes
145TOMM34569010225790.8600.6112Yes
146SURF1513004825960.8450.6121Yes
147RAF1177060026120.8320.6129Yes
148NR3C163056326480.8130.6126Yes
149RPLP2529002026530.8090.6140Yes
150SCP2520092 1570692 2570066 620053726690.7980.6148Yes
151PDHA1555039727090.7710.6142Yes
152PET112L780142 2260435 420073927410.7510.6141Yes
153BNIP3L194034727430.7510.6155Yes
154FECH2810605 3120088 492041127720.7330.6155Yes
155SLC25A134920072 569072227870.7270.6162Yes
156OPA12030433 3520390 473053728040.7170.6167Yes
157IDH3B569007028110.7140.6178Yes
158TIMM2360288 704013328800.6800.6155No
159NDUFC258007528970.6730.6160No
160MRPL958007929090.6660.6167No
161BCKDK1940601 399060029510.6490.6158No
162NDUFS8415010029870.6250.6151No
163MRPS2586072530210.6100.6145No
164TK1540014 540494 676015230700.5890.6131No
165COX5B655067030930.5760.6130No
166MRPL18656034131130.5640.6131No
167ATP5I622004731470.5480.6124No
168DNASE2705057631950.5280.6109No
169MRPL39700016132260.5150.6103No
170CYBA476073933380.4710.6052No
171CYP27A14050195 522003533760.4560.6041No
172COX11158012133850.4540.6045No
173RPL3206013833880.4520.6053No
174SDHB3120398 4780113 371043534440.4350.6032No
175NDUFB7185002634450.4330.6041No
176BAD212014834630.4290.6040No
177HAX1415067034740.4250.6043No
178ATP5S420013934880.4190.6045No
179DLD4150403 659034135090.4150.6042No
180BCKDHB78037235410.4050.6033No
181ATPIF1705057737200.3450.5943No
182SLC25A5198067237610.3310.5927No
183MRPL1536039038000.3230.5913No
184FDXR2100576 591052838710.3050.5881No
185TIMM8B119036439450.2880.5847No
186TOMM20651011340740.2600.5782No
187HADHB60064 269067040810.2580.5784No
188NDUFA55720239 655003541750.2410.5738No
189GPD22350075 269041143360.2160.5654No
190ACAT13170600 63043843660.2110.5643No
191NDUFAB1198009143690.2100.5646No
192UQCRFS1662057644030.2040.5632No
193BAK1645056344360.2000.5618No
194MAOB2970520 306005645570.1840.5556No
195HMGCL2510161 387052446340.1730.5518No
196DECR1659039046350.1730.5522No
197ATP5G3423055147820.1560.5445No
198DBT5220364 572044048770.1470.5396No
199SUCLG11850082 529027050560.1320.5302No
200GLYAT620023952080.1190.5221No
201MRPL131660215 285055152140.1190.5221No
202SUCLA2730632 117029252380.1170.5211No
203MFN15080546 620029252850.1140.5188No
204PPIF174005954620.1040.5094No
205DAP31660528 2120039 542059355370.0990.5055No
206MRPS14651005955380.0990.5057No
207SLC1A3150007055550.0980.5050No
208SLC25A28659060055610.0980.5050No
209TXNRD22510398 378045156510.0930.5003No
210ABAT1940520 2690021 569016757020.0910.4977No
211AMT318045059580.0800.4839No
212PDK4640030061180.0740.4754No
213PDHX87031561540.0730.4736No
214GRID2268024267000.0560.4439No
215MRPS22591045870260.0470.4262No
216POPDC2203005671290.0450.4207No
217AKAP102630504 591057773130.0420.4107No
218OGG1194027974540.0390.4031No
219AKAP1110148 1740735 2260019 700056375100.0380.4002No
220POLG2569004775150.0370.4001No
221HSPA1L401053875370.0370.3990No
222HADHA319004176070.0360.3953No
223PCCA339040076510.0350.3930No
224CYP27B15270114 536001079810.0280.3750No
225NDUFB4460348 569059481840.0250.3640No
226ATP5H67043885930.0190.3417No
227CRY1677003986130.0190.3407No
228FDX1405021591490.0100.3115No
229CNOT72450338 572039792890.0080.3039No
230MAOA1410039 461032493670.0070.2997No
231BNIP3314027094170.0060.2970No
232OTC174049495260.0040.2911No
233ODC1567016896210.0030.2859No
234MTHFD15900398 652042796500.0030.2844No
235CPT1A635009396680.0020.2835No
236HCCS670397 317034197170.0010.2809No
237TFB1M21901109832-0.0000.2746No
238ETFDH46703589884-0.0010.2718No
239MUT69001709904-0.0020.2708No
240UCP34200128 42101489928-0.0020.2695No
241TAT700042710068-0.0040.2619No
242TIMM9245048410266-0.0070.2512No
243OAT54063210292-0.0080.2498No
244SDS110242 638072510312-0.0080.2488No
245ARG2694046310373-0.0090.2455No
246MFN22260195 610016410383-0.0090.2451No
247GALR3485011310407-0.0090.2438No
248ACAD84590053 5130736 665027810489-0.0100.2394No
249MTIF2226027010572-0.0120.2349No
250GATM38067110746-0.0150.2255No
251SDHA700005610820-0.0160.2215No
252CKMT2158028810851-0.0160.2199No
253CYBB387002011185-0.0220.2017No
254LYPLA2150011211697-0.0320.1738No
255TIMM22124039711731-0.0320.1721No
256HSD3B270068 770037 4120114 4230170 569033311835-0.0340.1665No
257NDUFS1265025311853-0.0350.1656No
258SLC25A21602073912113-0.0410.1515No
259GCK237027312133-0.0420.1506No
260AMACR78021512356-0.0470.1385No
261SLC25A16420034112431-0.0490.1346No
262AGXT591033812539-0.0510.1288No
263SLC25A20319042712681-0.0560.1212No
264CYP11B2534012912777-0.0580.1161No
265COX7A1677042712991-0.0660.1046No
266CYP24A1234033813331-0.0790.0862No
267SPG71940041 622011313618-0.0950.0707No
268ATP7B2060711 2470039 3140301 665073513959-0.1170.0523No
269SLC1A1520372 642005914070-0.1260.0466No
270MRPL44394031514079-0.1270.0464No
271GCDH2190324 428034714080-0.1270.0466No
272LARS2700070614105-0.1290.0456No
273NFS11170465 268056314165-0.1340.0426No
274FRAP12850037 666001014286-0.1460.0363No
275MCCC152037314317-0.1480.0350No
276NNT540253 1170471 5550092 676039714542-0.1720.0231No
277HSD3B1306067214598-0.1820.0204No
278OGDH3840333 635010014623-0.1870.0195No
279MRPL196350400 700012114761-0.2100.0124No
280CASP8485015414893-0.2360.0057No
281CYP11A1345003714980-0.2590.0015No
282ATP5O700039814988-0.2620.0017No
283MRPL333450398 476028815047-0.277-0.0009No
284MRPS17467015615062-0.281-0.0011No
285NDUFA4686036415098-0.292-0.0025No
286CRAT540020 2060364 352014815138-0.300-0.0040No
287HK1428040215163-0.310-0.0047No
288HCLS1710030915236-0.333-0.0080No
289BCL2L11780044 420060115249-0.339-0.0079No
290PPOX2640678 385010215264-0.345-0.0080No
291BCKDHA5018915333-0.367-0.0110No
292SLC9A64570091 710009715348-0.372-0.0110No
293NDUFC12570377 420023915350-0.372-0.0103No
294NDUFA7590072215414-0.396-0.0130No
295UQCRC2555009115416-0.396-0.0122No
296MTCH23780603 662021515458-0.418-0.0136No
297ATP5B387013815483-0.427-0.0141No
298MIPEP6370497 640060915543-0.450-0.0164No
299COX7A2428011415560-0.457-0.0164No
300MRPS333800324 534072215645-0.495-0.0200No
301MRPL4860520 1190440 2260093 6100044 651008215660-0.500-0.0197No
302CASQ16290035 700070715682-0.513-0.0198No
303ME2508012115701-0.523-0.0198No
304IDH3G686070615769-0.553-0.0223No
305UCP1602036815808-0.574-0.0233No
306COX4I1534042715825-0.579-0.0230No
307CPT23940504 618007515833-0.582-0.0222No
308PDK1529042715965-0.653-0.0280No
309NDUFA2602010016014-0.681-0.0293No
310APAF158016216024-0.687-0.0284No
311TST73037216069-0.707-0.0294No
312ACADSB52017016154-0.762-0.0325No
313NDUFB3461068716211-0.809-0.0339No
314STAR704067016277-0.859-0.0357No
315TFAM3190164 684019516492-0.998-0.0454No
316MPO2360176 2760440 569017616547-1.029-0.0463No
317PTPRA710011016605-1.065-0.0473No
318MRP63236019316637-1.095-0.0468No
319ACADL6420044 686002516686-1.138-0.0471No
320COX6A11050095 145023916717-1.168-0.0464No
321PDK351048416763-1.217-0.0464No
322BCL2730132 1570736 2470138 3800044 4810037 5690068 5860504 665016416774-1.228-0.0445No
323HMGCS277072516845-1.298-0.0457No
324TIMM17B604040016855-1.310-0.0436No
325UQCRH421046316907-1.358-0.0436No
326STARD3572034116911-1.362-0.0411No
327MTRF11660022 234060516919-1.376-0.0387No
328DGUOK5050280 629030016939-1.390-0.0369No
329POLRMT329013116955-1.406-0.0349No
330PDHB70215 61008616979-1.426-0.0333No
331ALDH4A1245045017083-1.551-0.0358No
332MUTYH1780441 570012117125-1.604-0.0348No
333NDUFS31690136 534052817216-1.726-0.0363No
334ACADM460112 339011317218-1.727-0.0329No
335IMMT870450 428043817227-1.732-0.0298No
336BCL2L11580452 4200152 542048417267-1.792-0.0283No
337SLC25A14476018017344-1.873-0.0287No
338SLC25A12740073117471-2.092-0.0314No
339DIABLO236017017567-2.261-0.0321No
340BCAT2589011217613-2.334-0.0298No
341UROS3360139 412013317625-2.353-0.0257No
342NDUFS4510142 1240148 476025317681-2.452-0.0238No
343POLG78046517686-2.467-0.0190No
344NDUFA3604043817805-2.698-0.0200No
345IVD251067317869-2.856-0.0177No
346GOT24570164 522045017872-2.859-0.0121No
347TK27072517876-2.868-0.0065No
348UCP22190050 407071117943-3.001-0.0041No
349NRF1265019517980-3.1110.0002No
350COX7A2L150014218217-3.972-0.0047No
351NGFRAP1677019518242-4.0990.0022No
352DCI378002118304-4.4770.0079No
353MRPL24117001418316-4.5260.0164No
Table: GSEA details [plain text format]



Fig 2: HUMAN_MITODB_6_2002   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HUMAN_MITODB_6_2002: Random ES distribution   
Gene set null distribution of ES for HUMAN_MITODB_6_2002