Details for gene set BASSO_REGULATORY

Table: GSEA Results Summary

Dataset	Set_03_absentNotch_versus_normalThy.phenotype_absentNotch_versus_normalThy.cls #absentNotch_versus_normalThy.phenotype_absentNotch_versus_normalThy.cls #absentNotch_versus_normalThy_repos
Phenotype	phenotype_absentNotch_versus_normalThy.cls#absentNotch_versus_normalThy_repos
Upregulated in class	absentNotch
GeneSet	BASSO_REGULATORY_HUBS
Enrichment Score (ES)	0.66208035
Normalized Enrichment Score (NES)	1.7402238
Nominal p-value	0.0
FDR q-value	0.014862927
FWER p-Value	0.11

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	LGALS1	6450193	19	7.879	0.0438	Yes
2	RUVBL2	1190377	63	5.901	0.0751	Yes
3	SLC7A5	3310746	74	5.652	0.1067	Yes
4	JTV1	460324	133	5.018	0.1321	Yes
5	RCC1	2480358	145	4.901	0.1594	Yes
6	CYC1	2850546	154	4.832	0.1865	Yes
7	MRPL12	3120112	204	4.467	0.2093	Yes
8	POLD2	6400148	265	4.153	0.2297	Yes
9	MRPL3	1170736 5270025	290	4.043	0.2514	Yes
10	PSMD14	5690593	291	4.035	0.2743	Yes
11	D15WSU75E	6900451	316	3.930	0.2954	Yes
12	PRDX4	3800039	350	3.754	0.3150	Yes
13	GARS	1230601	425	3.520	0.3310	Yes
14	TCEB1	1170619	447	3.431	0.3494	Yes
15	NME1	770014	457	3.394	0.3682	Yes
16	TIMM17A	130092	530	3.187	0.3825	Yes
17	XPOT	7050184	552	3.140	0.3992	Yes
18	HSPE1	3170438	569	3.119	0.4161	Yes
19	RFC4	3800082 6840142	578	3.094	0.4333	Yes
20	PAICS	610142	608	3.017	0.4489	Yes
21	CTSH	60524	805	2.610	0.4531	Yes
22	CTPS	70451 1740132	844	2.532	0.4655	Yes
23	CSE1L	3850086	848	2.524	0.4797	Yes
24	MRPS12	4210707 6110341	863	2.507	0.4932	Yes
25	PES1	2470427	878	2.487	0.5066	Yes
26	CYCS	2030072	1055	2.235	0.5098	Yes
27	LITAF	6940671	1155	2.116	0.5165	Yes
28	MVP	4010253	1168	2.101	0.5278	Yes
29	TOMM40	6110017	1256	1.984	0.5344	Yes
30	BLMH	1410438	1277	1.964	0.5445	Yes
31	MAD2L1	4480725	1328	1.906	0.5526	Yes
32	NISCH	4850301	1461	1.728	0.5553	Yes
33	BHLHB2	7040603	1527	1.650	0.5612	Yes
34	HPRT1	1690398 4920619 6350170	1589	1.584	0.5669	Yes
35	EIF4G1	4070446	1608	1.575	0.5749	Yes
36	ASNS	110368 7100687	1621	1.564	0.5832	Yes
37	PSMB5	6290242	1644	1.542	0.5908	Yes
38	POLR2H	5890242	1773	1.425	0.5920	Yes
39	SLC25A4	2360519	1827	1.380	0.5969	Yes
40	LSM3	780164	1854	1.358	0.6033	Yes
41	TCP1	2450100 5130524	1856	1.357	0.6109	Yes
42	PSMD2	4670706 5050364	1939	1.273	0.6138	Yes
43	ITPR2	5360128	2044	1.185	0.6149	Yes
44	PSMB7	5570088 5890647	2045	1.184	0.6216	Yes
45	PRDX3	1690035	2094	1.147	0.6256	Yes
46	CYLD	6590079	2137	1.107	0.6296	Yes
47	TRIP13	6860341	2261	1.023	0.6288	Yes
48	RBM5	3520402 5270121	2345	0.997	0.6300	Yes
49	AHSA1	2030520	2391	0.974	0.6331	Yes
50	TPX2	6420324	2413	0.962	0.6374	Yes
51	LGALS9	1230079 2640181 2970398	2438	0.947	0.6415	Yes
52	ORC5L	1940133 1940711	2458	0.936	0.6458	Yes
53	P2RY10	6370039 6840204	2497	0.904	0.6489	Yes
54	AFG3L2	5130332	2512	0.897	0.6532	Yes
55	TPP1	3990446	2532	0.882	0.6572	Yes
56	S100A4	3780113	2536	0.881	0.6621	Yes
57	TEP1	7040735	2799	0.719	0.6520	No
58	EEF1E1	4540711	2850	0.695	0.6533	No
59	TUBG1	3140204	2999	0.621	0.6488	No
60	IL27RA	940093	3218	0.518	0.6400	No
61	TGOLN2	4920433	4089	0.257	0.5944	No
62	NDUFAB1	1980091	4369	0.210	0.5806	No
63	SLC4A3	360603 4730239 6380347	4434	0.200	0.5782	No
64	RPS26	510139	4569	0.182	0.5720	No
65	EIF2S1	5360292	5490	0.101	0.5229	No
66	CCNA2	5290075	5612	0.095	0.5169	No
67	CCNB1	4590433 4780372	5661	0.093	0.5148	No
68	TNFRSF1B	3990035 5860372	5701	0.091	0.5133	No
69	EPOR	5290435	6091	0.075	0.4927	No
70	PLCB2	360132	6188	0.072	0.4879	No
71	SFRS1	2360440	7351	0.041	0.4253	No
72	ITM2A	460576 4210086	8379	0.022	0.3700	No
73	UCHL1	1230066	9276	0.008	0.3216	No
74	ARVCF	2190537	9562	0.004	0.3062	No
75	CASP4	5860047 6650093	9919	-0.002	0.2870	No
76	ZMYND11	630181 2570019 4850138 5360040	10252	-0.007	0.2691	No
77	BYSL	3170110	10663	-0.013	0.2470	No
78	WDR18	6020102	10855	-0.016	0.2368	No
79	MGEA5	6100014	12253	-0.044	0.1616	No
80	LOR	50538	12844	-0.060	0.1301	No
81	QPCT	6180465	12861	-0.061	0.1295	No
82	SP100	3440632	12946	-0.064	0.1254	No
83	CD44	3990072 4850671 5860411 6860148 7050551	14448	-0.161	0.0452	No
84	SLC39A14	670300 1400093 1990711	14481	-0.165	0.0444	No
85	EBNA1BP2	50369 1400433 6040019	14634	-0.189	0.0373	No
86	CRIP1	4590377	14996	-0.263	0.0193	No
87	UBE2S	1850110	15322	-0.364	0.0038	No
88	HNRPAB	540504	15345	-0.371	0.0047	No
89	HHEX	2340575	15790	-0.564	-0.0161	No
90	DDB2	3520341 4610168 4850184 4920717	15817	-0.577	-0.0142	No
91	SAR1A	3450253	16049	-0.695	-0.0227	No
92	LAPTM5	5550372	16079	-0.715	-0.0202	No
93	BIN1	5420348 5670500	16104	-0.734	-0.0174	No
94	SHFM1	1570114	16151	-0.758	-0.0155	No
95	PCNA	940754	16217	-0.813	-0.0144	No
96	PRKCB1	870019 3130092	16350	-0.909	-0.0164	No
97	PSMA3	5900047 7040161	16501	-1.000	-0.0188	No
98	FEN1	1770541	16647	-1.102	-0.0203	No
99	EMG1	50286 380242	16682	-1.135	-0.0157	No
100	ITPR1	3450519	16788	-1.247	-0.0143	No
101	ANXA6	2190014	16831	-1.281	-0.0093	No
102	ETHE1	3440133	16904	-1.356	-0.0054	No
103	USP4	4850368	17374	-1.920	-0.0199	No
104	CCND2	5340167	17384	-1.954	-0.0092	No
105	PSMB2	940035 4210324	17591	-2.307	-0.0072	No
106	NDRG1	1340040	17904	-2.916	-0.0075	No
107	GABARAP	1450286	18089	-3.487	0.0024	No
108	ZYX	4730068	18326	-4.568	0.0157	No