Details for gene set REACTOME_SYNTHESIS_OF

Table: GSEA Results Summary

Dataset	Set_03_absentNotch_versus_normalThy.phenotype_absentNotch_versus_normalThy.cls #absentNotch_versus_normalThy.phenotype_absentNotch_versus_normalThy.cls #absentNotch_versus_normalThy_repos
Phenotype	phenotype_absentNotch_versus_normalThy.cls#absentNotch_versus_normalThy_repos
Upregulated in class	absentNotch
GeneSet	REACTOME_SYNTHESIS_OF_DNA
Enrichment Score (ES)	0.6834292
Normalized Enrichment Score (NES)	1.6664859
Nominal p-value	0.002074689
FDR q-value	0.041838653
FWER p-Value	0.301

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	PSMB1	2940402	118	5.165	0.0436	Yes
2	POLD2	6400148	265	4.153	0.0760	Yes
3	PSMD14	5690593	291	4.035	0.1137	Yes
4	PSMA4	4560427	339	3.803	0.1480	Yes
5	RFC3	1980600	432	3.495	0.1769	Yes
6	PSMC5	2760315 6550021	469	3.356	0.2074	Yes
7	PSME3	2810537	487	3.284	0.2383	Yes
8	RFC1	1190673	497	3.258	0.2694	Yes
9	PSMA7	2230131	498	3.257	0.3009	Yes
10	RFC4	3800082 6840142	578	3.094	0.3266	Yes
11	PSMC3	2480184	603	3.036	0.3547	Yes
12	PSMD8	630142	645	2.912	0.3807	Yes
13	LIG1	1980438 4540112 5570609	654	2.897	0.4083	Yes
14	PSMD3	1400647	849	2.522	0.4223	Yes
15	MCM3	5570068	925	2.409	0.4416	Yes
16	PRIM1	6420746	1091	2.192	0.4539	Yes
17	MCM4	2760673 5420711	1104	2.179	0.4743	Yes
18	PSMB3	4280594	1152	2.119	0.4923	Yes
19	PSMD12	730044	1154	2.117	0.5128	Yes
20	PSMB6	2690711	1234	2.020	0.5281	Yes
21	PSMC4	580050 1580025	1299	1.941	0.5434	Yes
22	MCM6	60092 540181 6510110	1326	1.907	0.5605	Yes
23	PSMC2	7040010	1411	1.790	0.5733	Yes
24	PSMB5	6290242	1644	1.542	0.5757	Yes
25	POLA2	940519	1657	1.535	0.5899	Yes
26	PSMC1	6350538	1930	1.286	0.5877	Yes
27	PSMD2	4670706 5050364	1939	1.273	0.5996	Yes
28	POLE	6020538	1952	1.262	0.6112	Yes
29	PSMC6	2810021	1957	1.260	0.6232	Yes
30	PSMA2	6510093	1964	1.252	0.6350	Yes
31	MCM5	2680647	2047	1.184	0.6420	Yes
32	PSMB10	630504 6510039	2146	1.098	0.6473	Yes
33	RFC5	3800452 6020091	2217	1.040	0.6536	Yes
34	MCM2	5050139	2398	0.971	0.6533	Yes
35	ORC5L	1940133 1940711	2458	0.936	0.6592	Yes
36	CDK2	130484 2260301 4010088 5050110	2469	0.928	0.6677	Yes
37	RPA2	2760301 5420195	2529	0.885	0.6731	Yes
38	MCM7	3290292 5220056	2567	0.868	0.6795	Yes
39	PSMA5	5390537	2641	0.816	0.6834	Yes
40	POLD1	4830026	2960	0.641	0.6725	No
41	PSMD7	2030619 6220594	3079	0.581	0.6718	No
42	ORC2L	1990470 6510019	3710	0.349	0.6412	No
43	PSMA6	50609	5043	0.133	0.5707	No
44	POLA1	4760541	7071	0.046	0.4619	No
45	ORC4L	4230538 5550288	7842	0.031	0.4207	No
46	PSMA1	380059 2760195	8066	0.027	0.4089	No
47	POLE2	6110041	8698	0.017	0.3750	No
48	PSMD5	3940139 4570041	11087	-0.020	0.2465	No
49	PSMB9	6980471	14256	-0.143	0.0771	No
50	PSMD11	2340538 6510053	15242	-0.337	0.0273	No
51	CDC45L	70537 3130114	15261	-0.345	0.0297	No
52	POLD3	6400278	15571	-0.461	0.0175	No
53	PSMB4	520402	15868	-0.602	0.0074	No
54	RPA3	5700136	16147	-0.757	-0.0003	No
55	PCNA	940754	16217	-0.813	0.0039	No
56	PSMA3	5900047 7040161	16501	-1.000	-0.0017	No
57	RPA1	360452	16553	-1.031	0.0055	No
58	PSMD9	50020 5890368	16581	-1.046	0.0142	No
59	FEN1	1770541	16647	-1.102	0.0214	No
60	PSMD4	430068	16674	-1.128	0.0309	No
61	PSME1	450193 4480035	16709	-1.157	0.0402	No
62	ORC1L	2370328 6110390	16727	-1.176	0.0507	No
63	RB1	5900338	16977	-1.425	0.0511	No
64	PSMD10	520494 1170576 3830050	17066	-1.530	0.0612	No
65	PSMB2	940035 4210324	17591	-2.307	0.0553	No