Details for gene set REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE

Table: GSEA Results Summary

Dataset	Set_03_absentNotch_versus_normalThy.phenotype_absentNotch_versus_normalThy.cls #absentNotch_versus_normalThy.phenotype_absentNotch_versus_normalThy.cls #absentNotch_versus_normalThy_repos
Phenotype	phenotype_absentNotch_versus_normalThy.cls#absentNotch_versus_normalThy_repos
Upregulated in class	absentNotch
GeneSet	REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA
Enrichment Score (ES)	0.66030395
Normalized Enrichment Score (NES)	1.6813476
Nominal p-value	0.0
FDR q-value	0.042663094
FWER p-Value	0.231

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	SNRPD3	2970050	22	7.611	0.0649	Yes
2	U2AF1	5130292	56	6.059	0.1158	Yes
3	METTL3	360497	138	4.992	0.1548	Yes
4	FUS	4760619	201	4.505	0.1905	Yes
5	NUP93	2190273	229	4.326	0.2267	Yes
6	CPSF1	6290064	558	3.130	0.2361	Yes
7	TXNL4A	4120286 6510242	606	3.022	0.2599	Yes
8	PHF5A	2690519	652	2.899	0.2826	Yes
9	SFRS6	60224	743	2.731	0.3015	Yes
10	SNRPF	3170280	754	2.717	0.3245	Yes
11	POLR2I	4060400	773	2.673	0.3468	Yes
12	SF3A3	6660603	793	2.637	0.3687	Yes
13	YBX1	1340039 4730500	798	2.627	0.3912	Yes
14	CCAR1	3190092	832	2.558	0.4117	Yes
15	NUP155	5720576 6220114	835	2.552	0.4337	Yes
16	NCBP2	5340500	855	2.514	0.4546	Yes
17	EFTUD2	2470707 4610148	919	2.425	0.4722	Yes
18	POLR2E	2900348 3360348	977	2.327	0.4893	Yes
19	NUP107	6380021	1025	2.269	0.5065	Yes
20	NUP43	3360482	1129	2.156	0.5197	Yes
21	RAE1	7050121	1136	2.145	0.5380	Yes
22	GTF2F2	2690546	1172	2.098	0.5543	Yes
23	SFRS9	3800047	1262	1.978	0.5667	Yes
24	SNRPD2	6110035	1403	1.796	0.5747	Yes
25	THOC4	3800731 6400114	1406	1.794	0.5902	Yes
26	CSTF2	6040463	1550	1.631	0.5967	Yes
27	RBMX	7100162 2900541	1619	1.566	0.6066	Yes
28	POLR2H	5890242	1773	1.425	0.6107	Yes
29	U2AF2	450600 4670128 5420292	1806	1.393	0.6211	Yes
30	SF3A2	3140500	1920	1.295	0.6262	Yes
31	NUP62	1240128	1966	1.249	0.6347	Yes
32	NUP160	1990551	2080	1.158	0.6386	Yes
33	SFRS2	50707 380593	2242	1.028	0.6389	Yes
34	CSTF1	4610129	2332	0.999	0.6427	Yes
35	RBM5	3520402 5270121	2345	0.997	0.6507	Yes
36	GTF2F1	360093	2417	0.960	0.6552	Yes
37	SFRS3	770315 4230593	2473	0.924	0.6603	Yes
38	NUPL2	6550537	2656	0.807	0.6575	No
39	DNAJC8	4050075	2819	0.712	0.6549	No
40	SNRPG	2340551	3041	0.601	0.6482	No
41	SF3B4	110072	3061	0.592	0.6524	No
42	NUDT21	1240167	3411	0.446	0.6374	No
43	SNRPA	2570100 4150121 6940484	3958	0.285	0.6104	No
44	SNRPB	1230097 2940086 3520671	3963	0.283	0.6127	No
45	POLR2J	7100372	4198	0.236	0.6021	No
46	MAGOH	2370373 5050068	4343	0.215	0.5962	No
47	POLR2A	5220647	4360	0.213	0.5972	No
48	PTBP1	4070736	4661	0.171	0.5824	No
49	RANBP2	4280338	4977	0.138	0.5666	No
50	POLR2G	5890600	5018	0.135	0.5657	No
51	PCF11	1240180	6628	0.058	0.4793	No
52	SNRPE	5080021	7256	0.043	0.4459	No
53	SFRS1	2360440	7351	0.041	0.4412	No
54	RNPS1	610736 1090021	7551	0.037	0.4307	No
55	POLR2B	3780138	8831	0.015	0.3619	No
56	SLBP	6220601	9407	0.006	0.3309	No
57	TPR	1990066 6550390	10130	-0.005	0.2920	No
58	NUP54	940546 2360156 4060278	11088	-0.020	0.2405	No
59	NUP188	1190470	11092	-0.020	0.2405	No
60	NUP153	7000452	11304	-0.024	0.2293	No
61	DHX9	60017 1170095 2260014	11358	-0.025	0.2267	No
62	SNRPB2	5720577	12393	-0.048	0.1713	No
63	POLR2C	1690020	12863	-0.061	0.1465	No
64	PAPOLA	4200286 4850112	12868	-0.061	0.1469	No
65	NUP35	5340408	13244	-0.075	0.1273	No
66	SF3B1	7000632	13414	-0.082	0.1189	No
67	SNRPA1	1050735 6110131	14482	-0.165	0.0627	No
68	NFX1	450504	14620	-0.186	0.0569	No
69	PCBP2	5690048	14631	-0.188	0.0580	No
70	NUP37	2370097 6370435 6380008	14827	-0.223	0.0495	No
71	CSTF3	3850156 5570458	15190	-0.320	0.0327	No
72	SMC1A	3060600 5700148 5890113 6370154	15208	-0.324	0.0346	No
73	EIF4E	1580403 70133 6380215	15331	-0.366	0.0312	No
74	SFRS5	3450176 6350008	15913	-0.624	0.0053	No
75	PABPN1	460519	16210	-0.806	-0.0037	No
76	SF3B3	3710044	16344	-0.907	-0.0030	No
77	PCBP1	1050088	16436	-0.964	0.0004	No
78	PRPF8	1230497 1570600	16611	-1.073	0.0004	No
79	SF3B2	6590576	16697	-1.150	0.0058	No
80	PRPF4	430301 2970364	16797	-1.252	0.0113	No
81	SRRM1	6110025	17118	-1.597	0.0079	No
82	SFRS7	2760408	17122	-1.602	0.0217	No
83	SF3A1	1580315	17293	-1.814	0.0282	No
84	SF4	3830341	17463	-2.080	0.0372	No
85	CD2BP2	1580301	17880	-2.874	0.0397	No