Details for gene set REACTOME_DNA

Table: GSEA Results Summary

Dataset	Set_03_absentNotch_versus_normalThy.phenotype_absentNotch_versus_normalThy.cls #absentNotch_versus_normalThy.phenotype_absentNotch_versus_normalThy.cls #absentNotch_versus_normalThy_repos
Phenotype	phenotype_absentNotch_versus_normalThy.cls#absentNotch_versus_normalThy_repos
Upregulated in class	absentNotch
GeneSet	REACTOME_DNA_REPLICATION
Enrichment Score (ES)	0.671781
Normalized Enrichment Score (NES)	1.6612906
Nominal p-value	0.0
FDR q-value	0.04172425
FWER p-Value	0.323

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	PSMB1	2940402	118	5.165	0.0426	Yes
2	POLD2	6400148	265	4.153	0.0742	Yes
3	PSMD14	5690593	291	4.035	0.1111	Yes
4	PSMA4	4560427	339	3.803	0.1447	Yes
5	RFC3	1980600	432	3.495	0.1729	Yes
6	PSMC5	2760315 6550021	469	3.356	0.2028	Yes
7	PSME3	2810537	487	3.284	0.2330	Yes
8	RFC1	1190673	497	3.258	0.2635	Yes
9	PSMA7	2230131	498	3.257	0.2944	Yes
10	RFC4	3800082 6840142	578	3.094	0.3195	Yes
11	PSMC3	2480184	603	3.036	0.3470	Yes
12	PSMD8	630142	645	2.912	0.3724	Yes
13	LIG1	1980438 4540112 5570609	654	2.897	0.3995	Yes
14	PSMD3	1400647	849	2.522	0.4129	Yes
15	MCM3	5570068	925	2.409	0.4318	Yes
16	PRIM1	6420746	1091	2.192	0.4437	Yes
17	MCM4	2760673 5420711	1104	2.179	0.4637	Yes
18	PSMB3	4280594	1152	2.119	0.4813	Yes
19	PSMD12	730044	1154	2.117	0.5013	Yes
20	PSMB6	2690711	1234	2.020	0.5162	Yes
21	PSMC4	580050 1580025	1299	1.941	0.5312	Yes
22	MCM6	60092 540181 6510110	1326	1.907	0.5479	Yes
23	PSMC2	7040010	1411	1.790	0.5603	Yes
24	PSMB5	6290242	1644	1.542	0.5624	Yes
25	POLA2	940519	1657	1.535	0.5764	Yes
26	PSMC1	6350538	1930	1.286	0.5739	Yes
27	PSMD2	4670706 5050364	1939	1.273	0.5855	Yes
28	POLE	6020538	1952	1.262	0.5969	Yes
29	PSMC6	2810021	1957	1.260	0.6086	Yes
30	PSMA2	6510093	1964	1.252	0.6202	Yes
31	MCM5	2680647	2047	1.184	0.6270	Yes
32	PSMB10	630504 6510039	2146	1.098	0.6321	Yes
33	RFC5	3800452 6020091	2217	1.040	0.6382	Yes
34	MCM2	5050139	2398	0.971	0.6377	Yes
35	ORC5L	1940133 1940711	2458	0.936	0.6434	Yes
36	CDK2	130484 2260301 4010088 5050110	2469	0.928	0.6517	Yes
37	RPA2	2760301 5420195	2529	0.885	0.6569	Yes
38	MCM7	3290292 5220056	2567	0.868	0.6631	Yes
39	PSMA5	5390537	2641	0.816	0.6669	Yes
40	GMNN	2630148	2690	0.783	0.6718	Yes
41	E2F2	5270609 5570377 7000465	2903	0.668	0.6667	No
42	POLD1	4830026	2960	0.641	0.6698	No
43	PSMD7	2030619 6220594	3079	0.581	0.6689	No
44	ORC2L	1990470 6510019	3710	0.349	0.6383	No
45	MCM10	4920632	4410	0.203	0.6025	No
46	PSMA6	50609	5043	0.133	0.5697	No
47	POLA1	4760541	7071	0.046	0.4608	No
48	ORC4L	4230538 5550288	7842	0.031	0.4196	No
49	PSMA1	380059 2760195	8066	0.027	0.4078	No
50	POLE2	6110041	8698	0.017	0.3740	No
51	PSMD5	3940139 4570041	11087	-0.020	0.2454	No
52	PSMB9	6980471	14256	-0.143	0.0760	No
53	PSMD11	2340538 6510053	15242	-0.337	0.0261	No
54	CDC45L	70537 3130114	15261	-0.345	0.0284	No
55	CDC7	4060546 4850041	15549	-0.452	0.0172	No
56	POLD3	6400278	15571	-0.461	0.0204	No
57	PSMB4	520402	15868	-0.602	0.0102	No
58	RPA3	5700136	16147	-0.757	0.0024	No
59	PCNA	940754	16217	-0.813	0.0064	No
60	PSMA3	5900047 7040161	16501	-1.000	0.0006	No
61	RPA1	360452	16553	-1.031	0.0076	No
62	PSMD9	50020 5890368	16581	-1.046	0.0161	No
63	FEN1	1770541	16647	-1.102	0.0231	No
64	PSMD4	430068	16674	-1.128	0.0324	No
65	PSME1	450193 4480035	16709	-1.157	0.0415	No
66	ORC1L	2370328 6110390	16727	-1.176	0.0518	No
67	RB1	5900338	16977	-1.425	0.0518	No
68	PSMD10	520494 1170576 3830050	17066	-1.530	0.0616	No
69	PSMB2	940035 4210324	17591	-2.307	0.0553	No