Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | Set_02_BT_ATM_minus_versus_ATM_plus.phenotype_BT_ATM_minus_versus_ATM_plus.cls #BT_ATM_minus_versus_ATM_plus.phenotype_BT_ATM_minus_versus_ATM_plus.cls #BT_ATM_minus_versus_ATM_plus_repos |
| Phenotype | phenotype_BT_ATM_minus_versus_ATM_plus.cls#BT_ATM_minus_versus_ATM_plus_repos |
| Upregulated in class | ATM_plus |
| GeneSet | TNFALPHA_30MIN_UP |
| Enrichment Score (ES) | -0.6186387 |
| Normalized Enrichment Score (NES) | -2.014714 |
| Nominal p-value | 0.0 |
| FDR q-value | 0.007341785 |
| FWER p-Value | 0.107 |
| PROBE | DESCRIPTION (from dataset) | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|---|
| 1 | PHB | 1435144_at 1442233_at 1448563_at | 930 | 1.130 | -0.0093 | No | ||
| 2 | HNRPU | 1423050_s_at 1423051_at 1434390_at 1434391_at 1450849_at | 1233 | 1.024 | 0.0070 | No | ||
| 3 | MCM7 | 1416030_a_at 1416031_s_at 1438320_s_at | 1699 | 0.925 | 0.0129 | No | ||
| 4 | TRAP1 | 1416170_at 1437379_x_at | 2131 | 0.826 | 0.0175 | No | ||
| 5 | HMGA1 | 1416184_s_at | 2222 | 0.804 | 0.0370 | No | ||
| 6 | SF3B2 | 1429362_a_at 1433461_at 1438637_x_at 1453123_at 1456040_at 1456352_a_at 1459836_x_at | 3759 | 0.526 | -0.0177 | No | ||
| 7 | CXCL1 | 1419209_at 1441855_x_at 1457644_s_at | 3952 | 0.504 | -0.0116 | No | ||
| 8 | SLC39A1 | 1424424_at | 6079 | 0.294 | -0.1001 | No | ||
| 9 | ATP5G2 | 1415980_at 1456128_at | 6844 | 0.235 | -0.1281 | No | ||
| 10 | PPP2R1A | 1415819_a_at 1438174_x_at 1438383_x_at 1438991_x_at 1455929_x_at | 6878 | 0.232 | -0.1228 | No | ||
| 11 | ERGIC3 | 1423548_s_at 1451017_at 1456745_x_at 1456867_x_at | 6994 | 0.223 | -0.1215 | No | ||
| 12 | CLIC1 | 1416656_at 1458665_at | 8109 | 0.146 | -0.1681 | No | ||
| 13 | KLF10 | 1416029_at | 8848 | 0.099 | -0.1988 | No | ||
| 14 | KALRN | 1429796_at 1436066_at 1442341_at 1442554_s_at 1445900_at 1448023_at 1457690_at 1457899_at 1459065_at | 8910 | 0.095 | -0.1988 | No | ||
| 15 | PRDX2 | 1418506_a_at 1430979_a_at | 10639 | -0.014 | -0.2773 | No | ||
| 16 | PIR | 1429001_at | 10817 | -0.026 | -0.2847 | No | ||
| 17 | PSMB7 | 1416240_at | 11103 | -0.044 | -0.2964 | No | ||
| 18 | NDUFA13 | 1430713_s_at | 11630 | -0.076 | -0.3182 | No | ||
| 19 | COPS2 | 1423459_at 1437039_at | 11738 | -0.083 | -0.3206 | No | ||
| 20 | INADL | 1418983_at 1418984_at 1440737_at 1442244_at 1442888_at | 13367 | -0.185 | -0.3895 | No | ||
| 21 | CTNNB1 | 1420811_a_at 1430533_a_at 1450008_a_at | 13598 | -0.201 | -0.3941 | No | ||
| 22 | MRPL36 | 1422819_at | 15366 | -0.326 | -0.4653 | No | ||
| 23 | OPRS1 | 1416750_at 1435579_at 1440792_x_at 1451956_a_at 1457324_at | 16200 | -0.394 | -0.4917 | No | ||
| 24 | HSPB1 | 1422943_a_at 1425964_x_at 1427853_a_at 1427854_x_at 1453914_at | 16239 | -0.397 | -0.4818 | No | ||
| 25 | NFKBIA | 1420088_at 1420089_at 1438157_s_at 1448306_at 1449731_s_at | 16399 | -0.411 | -0.4770 | No | ||
| 26 | PRDX5 | 1416381_a_at | 18230 | -0.614 | -0.5425 | No | ||
| 27 | ATF4 | 1438992_x_at 1439258_at 1448135_at | 19011 | -0.731 | -0.5567 | No | ||
| 28 | TNFAIP3 | 1433699_at 1450829_at | 20369 | -1.017 | -0.5888 | Yes | ||
| 29 | CHD1L | 1441806_at 1449415_at | 20713 | -1.118 | -0.5716 | Yes | ||
| 30 | TUBA1 | 1418884_x_at | 20768 | -1.142 | -0.5405 | Yes | ||
| 31 | TEGT | 1451586_at | 20960 | -1.237 | -0.5129 | Yes | ||
| 32 | IGFBP5 | 1422313_a_at 1452114_s_at | 21088 | -1.305 | -0.4804 | Yes | ||
| 33 | PLP2 | 1453572_a_at | 21115 | -1.316 | -0.4429 | Yes | ||
| 34 | DUSP1 | 1448830_at | 21168 | -1.349 | -0.4056 | Yes | ||
| 35 | MAP2K1 | 1416351_at | 21251 | -1.424 | -0.3675 | Yes | ||
| 36 | JUNB | 1415899_at | 21672 | -1.992 | -0.3282 | Yes | ||
| 37 | IER2 | 1416442_at | 21874 | -3.262 | -0.2416 | Yes | ||
| 38 | CD5 | 1418353_at | 21877 | -3.319 | -0.1441 | Yes | ||
| 39 | EGR1 | 1417065_at | 21922 | -4.993 | 0.0005 | Yes |
