DatasetSet_02_BT_ATM_minus_versus_ATM_plus.phenotype_BT_ATM_minus_versus_ATM_plus.cls
#BT_ATM_minus_versus_ATM_plus.phenotype_BT_ATM_minus_versus_ATM_plus.cls
#BT_ATM_minus_versus_ATM_plus_repos
Phenotypephenotype_BT_ATM_minus_versus_ATM_plus.cls#BT_ATM_minus_versus_ATM_plus_repos
Upregulated in classATM_plus
GeneSetICHIBA_GVHD
Enrichment Score (ES)-0.45480564
Normalized Enrichment Score (NES)-2.0261827
Nominal p-value0.0
FDR q-value0.006872976
FWER p-Value0.091
Table: GSEA Results Summary



Fig 1: Enrichment plot: ICHIBA_GVHD   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEDESCRIPTION
(from dataset)
GENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1PLAC81451335_at143.5070.0148No
2PLD41433678_at203.1960.0286No
3LCK1425396_a_at 1439145_at 1439146_s_at 1457917_at502.5280.0384No
4HBA-A11417714_x_at 1428361_x_at 1452757_s_at 1453574_at1522.0650.0428No
5SOCS11440047_at 1450446_a_at1981.9040.0491No
6SCOTIN1423986_a_at 1437503_a_at2491.7680.0546No
7PTPRC1422124_a_at 1440165_at2681.7340.0614No
8SCD51415822_at 1415823_at 1415824_at2871.7000.0681No
9ALAS21451675_a_at4021.5760.0697No
10UBAP2L1430993_at 1433541_a_at 1435882_at 1448017_at 1454643_at 1457249_at 1457534_at4081.5700.0764No
11COL4A11426348_at 1452035_at5351.4080.0768No
129830147J24RIK1425156_at 1434380_at5601.3780.0817No
13MCM101433407_at 1433408_a_at 1454244_at7251.2540.0797No
14BMPR21419616_at 1434310_at 1441652_at7741.2250.0828No
15SCMH11426241_a_at 1439554_at 1441573_at 1443158_at10191.0840.0763No
16TAP11416016_at 1420274_at 1448177_at 1449803_x_at13201.0060.0669No
17RPL221448398_s_at 1453118_s_at14600.9780.0648No
18NRP11418084_at 1448943_at 1448944_at 1457198_at15770.9530.0636No
19HCK1446553_at 1449455_at15850.9510.0675No
20LAPTM51426025_s_at 1436905_x_at 1447742_at 1459841_x_at16770.9300.0673No
21PTGS11423414_at 1436448_a_at 1457652_x_at22590.7960.0440No
22CD5L1449193_at23070.7840.0453No
23SLC11A11420361_at23440.7760.0470No
24HBB-B1 /// HBB-B21417184_s_at24690.7500.0446No
25EMR11451161_a_at24840.7460.0472No
26ORM31450611_at26070.7190.0447No
27MUP51426166_at26240.7160.0471No
28MKLN11416733_at 1416734_at 1440577_at 1442381_at 1444114_at 1445282_at 1446203_at 1458919_at26990.7010.0468No
29UBE1L1426971_at 1437317_at27440.6920.0478No
30TFF31417370_at27540.6890.0504No
31HPXN1423944_at28040.6820.0512No
32CAR141450725_s_at28260.6770.0532No
33TSPAN41448276_at28890.6670.0533No
34CCL51418126_at31460.6210.0442No
35LY751449328_at32280.6060.0431No
36CDC5L1428092_at 1460429_at33100.5930.0419No
37ACSL11422526_at 1423883_at 1447355_at 1450643_s_at 1460316_at33550.5860.0425No
38IL18R11421628_at33710.5830.0444No
391500011J06RIK1442083_at 1443559_at 1451640_a_at 1454074_a_at 1457383_at 1459715_at34550.5690.0430No
40HSD3B21425127_at35900.5510.0392No
41CES31435370_a_at 1435371_x_at 1449081_at36460.5430.0391No
42CXCL11419209_at 1441855_x_at 1457644_s_at39520.5040.0272No
43GHR1417962_s_at 1451501_a_at 1451871_a_at 1458832_at 1459948_at39900.5010.0277No
44PKLR1421258_a_at 1421259_at 1438711_at40340.4950.0279No
45LIPC1419560_at41910.4740.0228No
46SLC26A11451239_a_at 1458327_x_at42380.4680.0227No
47KRT1-181448169_at42440.4680.0245No
48AW0612341454984_at42470.4670.0265No
49LPL1415904_at43520.4570.0237No
50MSR11422062_at 1425434_a_at 1425435_at 1448061_at43960.4520.0237No
51MCM41416214_at 1436708_x_at44550.4450.0230No
52FKBP111417267_s_at 1425839_at 1425938_a_at44710.4430.0242No
53CTLA2B1452352_at45130.4390.0243No
54SERPINA61448506_at45220.4380.0258No
55CYP8B11449309_at45390.4360.0270No
56SC5DL1424709_at 1434520_at 1451457_at45510.4350.0284No
57CYP26A11419430_at45890.4310.0286No
58ACTL7B1424678_at49190.3990.0151No
59HSD3B31427377_x_at49580.3950.0151No
60NR2F61449846_at 1460647_a_at 1460648_at50310.3880.0135No
61MS4A6C1450234_at51060.3800.0117No
62BC0040221418154_at 1446956_at 1446957_s_at 1455606_at51250.3780.0126No
63PLK11443408_at 1448191_at 1459616_at51990.3710.0108No
64CYP2B91419590_at52090.3710.0121No
65PPP1R3C1425631_at 1433691_at53110.3610.0090No
66CCL61417266_at 1420249_s_at53360.3590.0094No
67CCL41421578_at53730.3550.0093No
68ZIC31423424_at 1438737_at53870.3540.0103No
69PAPSS21421987_at 1421988_at 1421989_s_at 1434510_at56340.3320.0004No
70SULT2A21419528_at58060.316-0.0061No
71GBP41418392_a_at59210.306-0.0100No
72PAX31420389_at 1430335_a_at 1441743_at 1459148_at62390.281-0.0235No
73TYROBP1450792_at63000.277-0.0250No
74MEM11427622_at63300.274-0.0252No
75SPTLC21420466_at 1435937_at 1454257_at 1460243_at63820.271-0.0263No
76PROM11419700_a_at64070.269-0.0263No
77SNX101431055_a_at 1459764_x_at65640.255-0.0323No
78TAP21453913_a_at66880.247-0.0369No
79D7ERTD143E1444292_at67070.246-0.0367No
80BTG21416250_at 1448272_at67690.241-0.0385No
81HAO31418654_at68740.232-0.0422No
82AKAP91435769_at 1437082_at 1446237_at 1447912_x_at 1447913_x_at 1455151_at68750.232-0.0412No
83PDZK11431701_a_at69180.229-0.0422No
84H2-EA1422891_at 1422892_s_at 1426202_at71320.214-0.0511No
85CYP2B101422257_s_at 1425645_s_at 1451787_at72800.203-0.0570No
86CYBB1422978_at 1436778_at 1436779_at77030.174-0.0757No
87GDF51419139_at77620.170-0.0777No
88CLIC11416656_at 1458665_at81090.146-0.0930No
89DIO11417991_at83000.133-0.1012No
90SULT4A11421606_a_at 1433714_at83390.131-0.1024No
91CRYAA1452486_a_at84990.120-0.1092No
92NNMT1432517_a_at85140.120-0.1093No
93ODZ31429178_at 1437727_at 1442997_at 1447183_at 1449315_at 1459441_at85380.118-0.1099No
94CRYL11416795_at 1430681_at 1447112_s_at 1459589_at86590.110-0.1149No
95MPEG1 /// LOC6713591427076_at86740.108-0.1151No
96EXOSC81420115_at 1428291_at 1449738_s_at87040.107-0.1160No
97KLF101416029_at88480.099-0.1222No
98FAS1460251_at88850.097-0.1234No
99C1QC1449401_at89090.095-0.1240No
100UCK11424399_at90920.084-0.1321No
101CASP11449265_at91640.079-0.1350No
102SAA21449326_x_at92260.075-0.1375No
103PRM31422913_at93310.068-0.1420No
104NCOA31422737_at 1457214_at 1458039_at93760.066-0.1438No
105FLOT11448559_at93870.065-0.1439No
106GAS11416855_at 1448494_at 1456322_at94500.061-0.1465No
107FGL21421854_at 1421855_at96510.048-0.1556No
108NR1D11421802_at 1426464_at97130.045-0.1582No
109FPR11450808_at97860.040-0.1614No
110TRAF3IP21445985_at 1448508_at99760.028-0.1700No
111MS4A4D1418990_at100770.020-0.1745No
112CCR11419609_at 1419610_at100820.020-0.1746No
113LOC6712371422660_at102940.007-0.1843No
114NAT81418013_at 1458044_at103060.006-0.1848No
115C1QB1417063_at 1434366_x_at 1437726_x_at 1457322_at103310.005-0.1859No
1165830411E10RIK1426806_at 1430623_s_at 1444399_at 1452203_at 1455679_at 1460521_a_at103510.004-0.1868No
117D17H6S56E-51417821_at 1417822_at103730.002-0.1877No
118ADRB31421555_at 1455918_at103810.001-0.1880No
119RBM131426426_at103850.001-0.1882No
120VEGFB1451803_a_at10499-0.005-0.1934No
121AI6078731457035_at10502-0.006-0.1935No
122G6PC1417880_at10603-0.012-0.1980No
123CYP4A10 /// BC0134761424853_s_at 1440134_at10618-0.013-0.1986No
124RETSAT1424715_at10773-0.022-0.2056No
125STX31425530_a_at 1425536_at 1426151_a_at 1434559_at10808-0.025-0.2071No
126RDH161420541_at10839-0.027-0.2084No
127GBP21418240_at 1435906_x_at10918-0.033-0.2118No
128MARCO1449498_at 1458297_s_at11002-0.038-0.2155No
129ELOVL21416444_at11364-0.060-0.2319No
130BIRC51424278_a_at11464-0.066-0.2362No
131VCAM11415989_at 1436003_at 1448162_at 1451314_a_at11490-0.068-0.2371No
132CCL71421228_at11618-0.075-0.2426No
133LPHN11428510_at 1452812_at11779-0.086-0.2496No
134APBB1IP1425269_at 1443145_at11814-0.088-0.2508No
135NXN1422465_a_at 1422466_at 1446804_at 1456160_at11838-0.089-0.2515No
136IRGM1418825_at12349-0.121-0.2745No
137SLC1A21433094_at 1451627_a_at 1458314_at12446-0.127-0.2784No
138CYB5611417507_at 1458496_at12458-0.127-0.2784No
139XDH1451006_at12517-0.131-0.2805No
140SH3GL11416338_at12564-0.134-0.2820No
141MUP1 /// MUP21420465_s_at12568-0.134-0.2816No
142CD531439589_at 1448617_at 1459744_at12718-0.143-0.2878No
143CYP2B131449479_at12807-0.149-0.2912No
1444921506I22RIK1430032_at 1431113_at 1444314_at 1452112_a_at12823-0.151-0.2913No
145SAAL11428002_at 1429199_s_at 1429200_at12844-0.152-0.2915No
1461110038F14RIK1416885_at12859-0.153-0.2915No
147GPX31449106_at12875-0.154-0.2915No
148IFI204 /// LOC6725471419603_at12917-0.156-0.2927No
149ACAA1B1424451_at13001-0.161-0.2958No
150LY861422903_at13016-0.162-0.2958No
151SELPL1449127_at13028-0.163-0.2956No
152CTSE1418989_at13066-0.165-0.2966No
153ORM21420438_at13124-0.170-0.2984No
154NFKBIZ1417483_at 1448728_a_at 1457404_at13146-0.171-0.2987No
155S100A111460351_at13356-0.184-0.3075No
156CYP7B11421074_at 1421075_s_at 1446995_at13421-0.189-0.3097No
157LIFR1425107_a_at 1450207_at13454-0.191-0.3103No
158AW1120101434372_at13582-0.199-0.3153No
159MMP121449153_at13623-0.202-0.3162No
160INMT1418697_at13692-0.208-0.3185No
161MT1A1422557_s_at 1451612_at13929-0.224-0.3284No
162MUP41420793_at13950-0.225-0.3283No
163IGFALS1422826_at14024-0.229-0.3307No
1644833445I07RIK1459927_at14142-0.237-0.3351No
165SLC25A101416954_at 1416955_at14168-0.239-0.3352No
166PPP1R21417341_a_at 1417342_at 1448684_at 1456830_at14294-0.248-0.3399No
167GRN1438629_x_at 1448148_at 1456567_x_at14546-0.266-0.3503No
168PSMB91450696_at14714-0.280-0.3568No
169A130022J15RIK1433671_at 1434492_at 1454678_s_at14762-0.283-0.3577No
170ATP1B31423126_at14781-0.285-0.3573No
171IFI202B1421551_s_at 1457666_s_at14972-0.298-0.3648No
172NOL11424019_at14979-0.299-0.3637No
173IL18BP1450424_a_at15051-0.304-0.3657No
174STAT11420915_at 1440481_at 1450033_a_at 1450034_at15109-0.307-0.3670No
175ORM11451054_at15213-0.316-0.3703No
1769130016M20RIK1453397_at15223-0.316-0.3694No
177GP49A /// LILRB41420394_s_at15227-0.316-0.3681No
178ELAC21419680_a_at 1428476_a_at 1428477_at15370-0.326-0.3732No
179CD141417268_at15652-0.348-0.3847No
180ELOVL61417403_at 1417404_at 1445062_at 1445578_at 1445641_at15815-0.361-0.3906No
181HMGCS21423858_a_at 1431833_a_at15879-0.367-0.3919No
182UBD1419762_at15981-0.376-0.3949No
183SNX121421797_a_at 1454807_a_at 1455465_at 1459041_at16026-0.379-0.3953No
184NFKBIA1420088_at 1420089_at 1438157_s_at 1448306_at 1449731_s_at16399-0.411-0.4107No
185IL1RN1423017_a_at 1425663_at 1451798_at16631-0.432-0.4195No
186CCDC941429733_at 1440956_at16650-0.433-0.4184No
187FCGR11417876_at 1436625_at16729-0.440-0.4200No
188LILRB3 /// LOC6196081424302_at16797-0.447-0.4212No
189LBP1448550_at16998-0.469-0.4284No
1901700013L23RIK1451625_a_at17112-0.480-0.4315No
191TLR61421352_at17162-0.485-0.4316No
192PRLR1421382_at 1425853_s_at 1437397_at 1441102_at 1448556_at 1450226_at 1451844_at 1451850_at17215-0.490-0.4319No
193GLT25D11433495_at 1433496_at17266-0.496-0.4320No
194DCLRE1A1417904_at 1432097_a_at 1442329_at17349-0.505-0.4336No
195PRTN31419669_at17421-0.514-0.4346No
196GBP11420549_at17423-0.514-0.4324No
197ELA11423693_at17607-0.533-0.4385No
198H2-D11425545_x_at 1425614_x_at 1426324_at 1427651_x_at 1451934_at 1452544_x_at17708-0.546-0.4407No
199SERPINA101424758_s_at17811-0.557-0.4430No
200IFIT31449025_at17935-0.575-0.4461No
201CXCL91418652_at 1456907_at18124-0.601-0.4522Yes
202GSTM61422072_a_at18134-0.602-0.4499Yes
203GLTP1419027_s_at18137-0.602-0.4474Yes
204CHI3L31419764_at18181-0.608-0.4467Yes
205CD681449164_at18184-0.608-0.4441Yes
206POM1211420004_s_at 1427886_at18267-0.619-0.4452Yes
207ADCY91418586_at18275-0.621-0.4428Yes
208VNN11418486_at 1447845_s_at18296-0.623-0.4409Yes
209CSF1R1419872_at 1419873_s_at 1423593_a_at18312-0.624-0.4389Yes
210SERPINA3G1424923_at18356-0.631-0.4381Yes
211PDK31426410_at18359-0.631-0.4354Yes
212IFIT11450783_at18463-0.646-0.4373Yes
213PTPN11417068_a_at 1438670_at18535-0.658-0.4377Yes
214SNX271430037_at 1433614_at18541-0.659-0.4350Yes
215RRAS1418448_at18562-0.662-0.4331Yes
216FABP11417556_at 1448764_a_at18592-0.666-0.4315Yes
217CXCL101418930_at18611-0.669-0.4294Yes
218H2-AB11425477_x_at 1450648_s_at 1451721_a_at18661-0.677-0.4286Yes
219SLPI1448377_at18727-0.689-0.4286Yes
220ATP11A1421167_at 1456388_at18765-0.694-0.4273Yes
221CYBA1454268_a_at18861-0.707-0.4286Yes
222IQGAP11417379_at 1417380_at 1431395_a_at 1431396_at 1434998_at 1445724_at 1458124_at18874-0.710-0.4260Yes
223AVPR1A1418603_at 1418604_at18931-0.718-0.4254Yes
224SAA3P1450826_a_at18968-0.725-0.4239Yes
225KEG11416833_at 1444032_at19006-0.731-0.4224Yes
226S100A61421375_a_at19044-0.737-0.4208Yes
227USP181418191_at 1444449_at19132-0.752-0.4216Yes
228TMSB4X1415906_at19207-0.768-0.4216Yes
229WARS1415694_at 1425106_a_at 1434813_x_at 1437832_x_at19245-0.775-0.4199Yes
230SIRPA1416985_at 1416986_a_at 1448534_at19289-0.783-0.4184Yes
231OAT1416452_at19314-0.787-0.4161Yes
232ITPK11426733_at19322-0.788-0.4129Yes
233CFP1452279_at19361-0.795-0.4112Yes
234H2-DMB11418638_at 1443686_at 1443687_x_at19384-0.798-0.4087Yes
235CTSC1416382_at 1437939_s_at 1446834_at19498-0.821-0.4103Yes
236RELN1449465_at 1458020_at19537-0.828-0.4084Yes
237FKBP51416125_at 1447736_at 1448231_at 1458089_at19553-0.831-0.4055Yes
238PKM21417308_at19607-0.842-0.4042Yes
239CAMP1419691_at19608-0.842-0.4005Yes
240CCL21420380_at19682-0.858-0.4001Yes
241RND21422670_at19731-0.868-0.3985Yes
242HP1448881_at19769-0.878-0.3963Yes
243RPS6KC11434563_at19813-0.887-0.3944Yes
244PSCDBP1435697_a_at 1451206_s_at19864-0.899-0.3928Yes
245OSBPL51425391_a_at19880-0.903-0.3895Yes
246CTPS1416563_at19969-0.926-0.3895Yes
247AIF11418204_s_at19980-0.928-0.3859Yes
248CDC42SE21435220_s_at19998-0.932-0.3825Yes
249C1QA1417381_at20000-0.932-0.3785Yes
250MUP31427249_x_at 1427631_x_at20017-0.937-0.3751Yes
251NEK91424094_at 1460744_at20081-0.954-0.3738Yes
252MT2A1428942_at20088-0.955-0.3699Yes
253HES61436050_x_at 1452021_a_at20121-0.961-0.3671Yes
254PSMB101448632_at20180-0.975-0.3655Yes
255IBRDC31432478_a_at 1435226_at20225-0.991-0.3632Yes
256IIGP11419042_at 1419043_a_at20297-1.003-0.3621Yes
257S100A41424542_at20518-1.054-0.3676Yes
258IRF81416714_at 1448452_at20594-1.075-0.3663Yes
259TGTP1449009_at20623-1.085-0.3629Yes
260LITAF1416303_at 1416304_at20628-1.087-0.3583Yes
261PSMB81422962_a_at 1444619_x_at20668-1.098-0.3552Yes
262FBXO211451543_at 1452828_at20708-1.115-0.3521Yes
263PBEF11417190_at 1448607_at20712-1.117-0.3473Yes
264IL6ST1421239_at 1437303_at 1452843_at 1460295_s_at20813-1.163-0.3469Yes
265HSD17B21418352_at20927-1.220-0.3467Yes
266D12ERTD647E1452956_a_at 1454757_s_at20976-1.244-0.3434Yes
267CASP61415995_at 1458715_at20988-1.249-0.3385Yes
268PSME11417056_at21036-1.272-0.3350Yes
269PLD31416013_at21120-1.320-0.3331Yes
270LRG11417290_at21153-1.340-0.3286Yes
271H2-DMA1422527_at 1459872_x_at21172-1.351-0.3235Yes
272LY6A1417185_at21212-1.387-0.3192Yes
273IFI351424617_at 1445897_s_at 1459151_x_at21278-1.444-0.3159Yes
274LGALS31426808_at 1445626_at21288-1.451-0.3099Yes
275EIF11423798_a_at 1423799_at 1424343_a_at 1424344_s_at21301-1.460-0.3040Yes
276LGALS3BP1448380_at21333-1.488-0.2989Yes
277NCF41418465_at21341-1.500-0.2926Yes
278LTF1450009_at21352-1.510-0.2865Yes
279LCP21418641_at 1418642_at21385-1.531-0.2812Yes
280NGP1418722_at21408-1.565-0.2753Yes
281ICAM11424067_at21412-1.572-0.2685Yes
282SMOC21415935_at 1431362_a_at21423-1.579-0.2621Yes
283RPAP11426890_a_at 1426891_at 1440986_at 1443484_at21472-1.626-0.2571Yes
284CDC91L11427466_at 1427928_s_at 1439350_s_at 1459134_at 1459297_at21527-1.697-0.2521Yes
285AIM11426942_at 1444412_at21528-1.698-0.2447Yes
286TAPBP1421812_at 1450378_at21547-1.717-0.2379Yes
287CTSS1448591_at21552-1.721-0.2306Yes
288LGMN1448883_at21553-1.723-0.2230Yes
289S100A81419394_s_at21598-1.810-0.2170Yes
290GIMAP41424374_at 1424375_s_at21609-1.840-0.2094Yes
291MARVELD11433538_at 1436773_x_at 1436830_at 1439381_x_at21650-1.926-0.2028Yes
292SLFN21450165_at21657-1.938-0.1945Yes
293IRF11448436_a_at21686-2.021-0.1869Yes
294PSME21417189_at21701-2.070-0.1784Yes
295CD741425519_a_at21711-2.114-0.1696Yes
296ITGB21450678_at21722-2.148-0.1606Yes
297IIGP21417793_at21729-2.176-0.1513Yes
298IFI471417292_at21731-2.184-0.1417Yes
299PROCR1420664_s_at21748-2.247-0.1325Yes
300H2-AA1435290_x_at 1438858_x_at 1443783_x_at21761-2.298-0.1230Yes
301IRF71417244_a_at21765-2.318-0.1129Yes
302S100A91448756_at21769-2.327-0.1028Yes
303H2-EB11417025_at21771-2.337-0.0926Yes
304CD71419711_at21812-2.672-0.0826Yes
305CD521460218_at21843-2.935-0.0711Yes
306QSCN61420831_at 1420832_at 1438252_at 1439417_at21848-2.971-0.0582Yes
307TMSB101417219_s_at 1436682_at 1436902_x_at 1437185_s_at 1455946_x_at21850-2.987-0.0451Yes
308LYZS1423547_at21855-3.078-0.0317Yes
309SAMHD11418131_at 1434438_at 1444064_at21894-3.594-0.0177Yes
310KLF21448890_at21918-4.4270.0007Yes
Table: GSEA details [plain text format]



Fig 2: ICHIBA_GVHD   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: ICHIBA_GVHD: Random ES distribution   
Gene set null distribution of ES for ICHIBA_GVHD