Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | Set_02_BT_ATM_minus_versus_ATM_plus.phenotype_BT_ATM_minus_versus_ATM_plus.cls #BT_ATM_minus_versus_ATM_plus.phenotype_BT_ATM_minus_versus_ATM_plus.cls #BT_ATM_minus_versus_ATM_plus_repos |
| Phenotype | phenotype_BT_ATM_minus_versus_ATM_plus.cls#BT_ATM_minus_versus_ATM_plus_repos |
| Upregulated in class | ATM_plus |
| GeneSet | EMT_DN |
| Enrichment Score (ES) | -0.61550397 |
| Normalized Enrichment Score (NES) | -2.0499985 |
| Nominal p-value | 0.0 |
| FDR q-value | 0.005151343 |
| FWER p-Value | 0.063 |
| PROBE | DESCRIPTION (from dataset) | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|---|
| 1 | CTNND1 | 1422450_at 1437448_s_at 1445830_at | 291 | 1.690 | 0.0188 | No | ||
| 2 | ITGB5 | 1417533_a_at 1417534_at 1456133_x_at 1456195_x_at | 410 | 1.568 | 0.0431 | No | ||
| 3 | NRP1 | 1418084_at 1448943_at 1448944_at 1457198_at | 1577 | 0.953 | 0.0079 | No | ||
| 4 | PLK2 | 1427005_at | 1966 | 0.865 | 0.0066 | No | ||
| 5 | ITPR1 | 1417279_at 1443492_at 1457189_at 1460203_at | 2595 | 0.722 | -0.0084 | No | ||
| 6 | ID1 | 1425895_a_at | 3327 | 0.591 | -0.0306 | No | ||
| 7 | HMMR | 1425815_a_at 1427541_x_at 1429871_at 1450156_a_at 1450157_a_at | 4310 | 0.461 | -0.0667 | No | ||
| 8 | CTGF | 1416953_at | 4313 | 0.461 | -0.0580 | No | ||
| 9 | NUMB | 1416891_at 1425368_a_at 1444337_at 1457175_at | 4709 | 0.419 | -0.0681 | No | ||
| 10 | GRB7 | 1448227_at | 5781 | 0.320 | -0.1110 | No | ||
| 11 | ATP1A1 | 1423653_at 1435919_at 1435920_x_at 1451071_a_at 1458868_at | 6902 | 0.230 | -0.1578 | No | ||
| 12 | TACSTD1 | 1416579_a_at 1447899_x_at | 6964 | 0.225 | -0.1563 | No | ||
| 13 | PKP1 | 1449586_at | 7118 | 0.214 | -0.1593 | No | ||
| 14 | TIMP3 | 1419088_at 1419089_at 1449334_at 1449335_at | 7259 | 0.204 | -0.1618 | No | ||
| 15 | CHKA | 1442277_at 1445795_at 1450264_a_at 1453582_at | 8151 | 0.143 | -0.1998 | No | ||
| 16 | KLF10 | 1416029_at | 8848 | 0.099 | -0.2297 | No | ||
| 17 | CDH1 | 1443509_at 1448261_at | 10447 | -0.002 | -0.3027 | No | ||
| 18 | BCL6 | 1421818_at 1450381_a_at | 11919 | -0.094 | -0.3681 | No | ||
| 19 | SERPINB5 | 1421752_a_at 1424623_at 1438856_x_at 1441941_x_at | 12057 | -0.102 | -0.3724 | No | ||
| 20 | INMT | 1418697_at | 13692 | -0.208 | -0.4431 | No | ||
| 21 | FOSB | 1422134_at | 14066 | -0.232 | -0.4558 | No | ||
| 22 | VAMP8 | 1420624_a_at | 15582 | -0.342 | -0.5185 | No | ||
| 23 | TGFB3 | 1417455_at | 16050 | -0.381 | -0.5326 | No | ||
| 24 | IRF6 | 1418301_at | 16614 | -0.430 | -0.5502 | No | ||
| 25 | STAT5A | 1421469_a_at 1450259_a_at | 16987 | -0.467 | -0.5583 | No | ||
| 26 | FBP2 | 1449088_at | 17321 | -0.501 | -0.5640 | No | ||
| 27 | F3 | 1417408_at | 17490 | -0.521 | -0.5618 | No | ||
| 28 | TGM2 | 1417500_a_at 1426004_a_at 1433428_x_at 1437277_x_at 1438942_x_at 1455900_x_at | 17789 | -0.555 | -0.5649 | No | ||
| 29 | NNT | 1416105_at 1432608_at 1456573_x_at | 18317 | -0.625 | -0.5771 | No | ||
| 30 | PRKCZ | 1418085_at 1449692_at 1454902_at | 18718 | -0.686 | -0.5824 | No | ||
| 31 | ATF3 | 1449363_at | 18862 | -0.707 | -0.5755 | No | ||
| 32 | MYH9 | 1417472_at 1420170_at 1420171_s_at 1420172_at 1440708_at | 19739 | -0.870 | -0.5990 | Yes | ||
| 33 | CA2 | 1448752_at | 19889 | -0.905 | -0.5886 | Yes | ||
| 34 | TIAM1 | 1418057_at 1444373_at 1453887_a_at | 20197 | -0.980 | -0.5841 | Yes | ||
| 35 | ARHGEF1 | 1421164_a_at 1440403_at | 20341 | -1.012 | -0.5714 | Yes | ||
| 36 | JUP | 1426873_s_at | 20619 | -1.085 | -0.5635 | Yes | ||
| 37 | RARA | 1450180_a_at | 20805 | -1.159 | -0.5500 | Yes | ||
| 38 | ID4 | 1423259_at 1423260_at 1438441_at 1450928_at | 21157 | -1.344 | -0.5405 | Yes | ||
| 39 | DUSP1 | 1448830_at | 21168 | -1.349 | -0.5154 | Yes | ||
| 40 | SGK | 1416041_at | 21376 | -1.525 | -0.4959 | Yes | ||
| 41 | TSC22D1 | 1425742_a_at 1433899_x_at 1447360_at 1454758_a_at 1454971_x_at 1456132_x_at | 21613 | -1.847 | -0.4716 | Yes | ||
| 42 | SAT1 | 1420502_at | 21621 | -1.860 | -0.4367 | Yes | ||
| 43 | FLNA | 1426677_at | 21670 | -1.984 | -0.4012 | Yes | ||
| 44 | CTSH | 1418365_at 1443814_x_at | 21800 | -2.556 | -0.3586 | Yes | ||
| 45 | ID2 | 1422537_a_at 1435176_a_at 1453596_at | 21890 | -3.497 | -0.2964 | Yes | ||
| 46 | KLF2 | 1448890_at | 21918 | -4.427 | -0.2136 | Yes | ||
| 47 | EGR1 | 1417065_at | 21922 | -4.993 | -0.1190 | Yes | ||
| 48 | EGR2 | 1427682_a_at 1427683_at | 21930 | -6.298 | 0.0002 | Yes |
