Details for gene set REGULATION_OF_SIGNAL

Table: GSEA Results Summary

Dataset	Set_02_ATM_minus_versus_BT_ATM_minus.phenotype_ATM_minus_versus_BT_ATM_minus.cls #ATM_minus_versus_BT_ATM_minus.phenotype_ATM_minus_versus_BT_ATM_minus.cls #ATM_minus_versus_BT_ATM_minus_repos
Phenotype	phenotype_ATM_minus_versus_BT_ATM_minus.cls#ATM_minus_versus_BT_ATM_minus_repos
Upregulated in class	BT_ATM_minus
GeneSet	REGULATION_OF_SIGNAL_TRANSDUCTION
Enrichment Score (ES)	-0.38513947
Normalized Enrichment Score (NES)	-1.6325351
Nominal p-value	0.0
FDR q-value	0.4922357
FWER p-Value	1.0

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	ECM1	1448613_at	222	4.912	0.0059	No
2	TFG	1415887_at 1438053_at	244	4.827	0.0208	No
3	HMOX1	1448239_at	719	3.389	0.0101	No
4	RIC8B	1435096_at 1439724_at	724	3.376	0.0210	No
5	EEF1D	1428135_a_at 1439439_x_at 1449506_a_at 1459754_x_at	818	3.213	0.0273	No
6	BST2	1424921_at	899	3.097	0.0338	No
7	GRK1	1421361_at	1213	2.767	0.0285	No
8	LGALS9	1421217_a_at	1267	2.716	0.0350	No
9	CASP8	1424552_at	1277	2.700	0.0434	No
10	NF1	1438067_at 1441523_at 1443097_at 1452525_a_at	1365	2.618	0.0480	No
11	GOLT1B	1449859_at 1460583_at	1521	2.474	0.0490	No
12	TNFRSF10B	1421296_at 1422344_s_at	1534	2.459	0.0565	No
13	GPR89A	1424696_at	1639	2.379	0.0595	No
14	GNG7	1455190_at	1808	2.254	0.0592	No
15	TDGF1	1450989_at	1963	2.151	0.0592	No
16	TPD52L1	1418412_at	2020	2.121	0.0636	No
17	LTBR	1416435_at	2022	2.119	0.0705	No
18	GRK5	1446361_at 1446998_at 1449514_at	2835	1.773	0.0390	No
19	GRK4	1420355_at 1454152_a_at	2884	1.758	0.0425	No
20	ABRA	1458455_at	3077	1.697	0.0393	No
21	RAC1	1423734_at 1437674_at 1451086_s_at	3186	1.669	0.0398	No
22	PLK2	1427005_at	3190	1.666	0.0451	No
23	TSC1	1422043_at 1439989_at 1455252_at	3251	1.648	0.0478	No
24	MAPK8IP3	1416437_a_at 1425975_a_at 1436676_at 1460628_at	3654	1.519	0.0343	No
25	TRAF3IP2	1445985_at 1448508_at	3675	1.513	0.0383	No
26	IL12A	1425454_a_at	3763	1.492	0.0392	No
27	NFAM1	1425714_a_at 1428790_at	3791	1.482	0.0428	No
28	ADRB3	1421555_at 1455918_at	3934	1.444	0.0410	No
29	PLEKHG5	1452248_at	4840	1.199	0.0033	No
30	TRIM13	1417888_at	4886	1.188	0.0052	No
31	VAPA	1416465_a_at 1416466_at 1448349_at	4909	1.183	0.0081	No
32	EDA2R	1440085_at	4990	1.164	0.0082	No
33	RGS9	1418691_at 1426033_at 1439635_at	5071	1.146	0.0083	No
34	ATP6AP2	1423662_at 1437688_x_at 1439456_x_at	5161	1.131	0.0079	No
35	RGS5	1420940_x_at 1420941_at	5257	1.113	0.0072	No
36	NEK6	1451043_at	5277	1.109	0.0100	No
37	LITAF	1416303_at 1416304_at	5330	1.099	0.0112	No
38	SECTM1	1419478_at 1419479_at	5359	1.095	0.0135	No
39	GLI1	1449058_at	5545	1.055	0.0084	No
40	TMED4	1448422_at 1448423_at	5554	1.054	0.0115	No
41	RGS3	1425701_a_at 1427648_at 1449516_a_at 1454026_a_at	5626	1.041	0.0117	No
42	SMAD2	1420634_a_at 1458304_at	6070	0.961	-0.0055	No
43	PPP5C	1424115_at 1424116_x_at 1451242_a_at	6164	0.946	-0.0067	No
44	RPL17	1423855_x_at 1435791_x_at 1453752_at	6219	0.939	-0.0061	No
45	CD24	1416034_at 1437502_x_at 1448182_a_at	6232	0.937	-0.0036	No
46	GIT1	1454759_at	6361	0.914	-0.0065	No
47	PEG10	1427550_at	6551	0.876	-0.0123	No
48	TLR6	1421352_at	6582	0.871	-0.0108	No
49	TSPAN6	1416872_at 1448501_at	6630	0.862	-0.0101	No
50	IGF1	1419519_at 1436497_at 1437401_at 1452014_a_at	6733	0.843	-0.0121	No
51	RIPK2	1421236_at 1450173_at	6767	0.837	-0.0108	No
52	CASP1	1449265_at	6797	0.832	-0.0094	No
53	TGFB1	1420653_at 1445360_at	7100	0.779	-0.0208	No
54	CIDEA	1417956_at	7154	0.771	-0.0207	No
55	CBLC	1422666_at 1431692_a_at	7290	0.749	-0.0244	No
56	RHOC	1435394_s_at 1448605_at	7295	0.749	-0.0222	No
57	DMPK	1422989_a_at 1434944_at	7439	0.724	-0.0264	No
58	FRZB	1416658_at 1448424_at	7509	0.714	-0.0272	No
59	CDKN2B	1449152_at	7628	0.694	-0.0303	No
60	EREG	1419431_at	7953	0.640	-0.0431	No
61	SHC1	1422853_at 1422854_at	8026	0.627	-0.0444	No
62	RGN	1448852_at	8818	0.502	-0.0791	No
63	PPM1A	1415678_at 1417221_at 1425537_at 1429500_at 1429501_s_at 1443903_at 1451943_a_at 1453171_s_at	8900	0.488	-0.0813	No
64	ZDHHC17	1434397_at 1447656_at 1455986_at 1458084_at 1458363_at	9036	0.468	-0.0859	No
65	EGF	1418093_a_at	9052	0.465	-0.0851	No
66	PLCE1	1452398_at	9089	0.459	-0.0852	No
67	SLA2	1437504_at 1451492_at	9126	0.454	-0.0854	No
68	UBE2N	1422559_at 1435384_at	9349	0.422	-0.0942	No
69	TNFSF10	1420412_at 1439680_at 1459913_at	9604	0.385	-0.1047	No
70	IL20	1421608_at	9612	0.384	-0.1037	No
71	ACVR2A	1437382_at 1439643_at 1445026_at 1451004_at	9664	0.377	-0.1048	No
72	MYD88	1419272_at	9908	0.336	-0.1149	No
73	CDKN1C	1417649_at	9909	0.336	-0.1138	No
74	OTUD7B	1428953_at 1429139_at 1435552_at 1457716_at	10063	0.311	-0.1198	No
75	FGD4	1425037_at 1426041_a_at 1426042_at 1451659_at 1455337_at	10302	0.274	-0.1299	No
76	PTEN	1422553_at 1441593_at 1444325_at 1450655_at 1454722_at 1455728_at 1457493_at	10343	0.267	-0.1308	No
77	LGALS1	1419573_a_at 1455439_a_at	10568	0.234	-0.1404	No
78	ALS2	1417783_at 1417784_at 1431608_at 1446183_at	10626	0.227	-0.1422	No
79	FASLG	1418803_a_at 1449235_at	10638	0.224	-0.1420	No
80	NF2	1421820_a_at 1427708_a_at 1450382_at 1451829_a_at	10753	0.207	-0.1466	No
81	ZIC1	1423477_at 1439627_at	10790	0.201	-0.1476	No
82	GRM4	1457299_at	10912	0.185	-0.1525	No
83	TNFAIP3	1433699_at 1450829_at	10976	0.174	-0.1548	No
84	EDG2	1417143_at 1426110_a_at 1448606_at	11056	0.161	-0.1580	No
85	CD40	1439221_s_at 1449473_s_at 1460415_a_at	11203	0.138	-0.1642	No
86	SLC35B2	1423927_at 1429007_at	11282	0.126	-0.1674	No
87	CANT1	1421476_a_at 1433709_at 1451688_s_at	11404	0.108	-0.1726	No
88	TRAF6	1421376_at 1421377_at 1435350_at 1443288_at 1446940_at 1446977_at	11435	0.105	-0.1736	No
89	NDFIP2	1452066_a_at	11461	0.100	-0.1745	No
90	NCK2	1416796_at 1416797_at 1458432_at	11703	0.062	-0.1853	No
91	INHBA	1422053_at 1458291_at	11897	0.031	-0.1941	No
92	RIPK1	1419508_at 1439273_at 1449485_at	12208	-0.017	-0.2083	No
93	HIPK2	1424863_a_at 1424864_at 1425983_x_at 1428433_at 1429566_a_at 1432523_at 1446167_at 1448631_a_at 1456022_at 1458520_at	12379	-0.049	-0.2160	No
94	FGD5	1460578_at	12505	-0.072	-0.2215	No
95	OTX2	1425926_a_at	12599	-0.091	-0.2255	No
96	FGD1	1416865_at 1437369_at 1459278_at	12688	-0.103	-0.2292	No
97	ECT2	1419513_a_at	12865	-0.133	-0.2368	No
98	SLC44A2	1428065_at 1438559_x_at 1438860_a_at	12892	-0.139	-0.2376	No
99	RGS20	1421493_a_at 1443694_at 1446199_at	12949	-0.148	-0.2397	No
100	CDH13	1423551_at 1431824_at 1454015_a_at 1459535_at	13118	-0.176	-0.2468	No
101	MAPK8IP2	1418785_at 1418786_at 1435045_s_at 1449225_a_at 1455194_at	13137	-0.179	-0.2471	No
102	FGD2	1419515_at	13161	-0.183	-0.2475	No
103	FGD6	1419322_at 1435467_at	13413	-0.225	-0.2583	No
104	AMBP	1416649_at	13647	-0.268	-0.2682	No
105	ZDHHC13	1428307_at 1460048_at	13754	-0.286	-0.2721	No
106	CXXC5	1431469_a_at 1448960_at	13783	-0.290	-0.2724	No
107	MFN2	1441424_at 1448131_at 1451900_at	14037	-0.333	-0.2830	No
108	REL	1420710_at	14071	-0.338	-0.2834	No
109	MDFI	1420713_a_at 1425924_at	14130	-0.348	-0.2849	No
110	HGS	1416540_at	14208	-0.363	-0.2873	No
111	RHOA	1437628_s_at	14467	-0.413	-0.2978	No
112	RASGRP4	1425380_at	14520	-0.423	-0.2988	No
113	GJA1	1415800_at 1415801_at 1437992_x_at 1438650_x_at 1438945_x_at 1438973_x_at	14663	-0.450	-0.3038	No
114	NDFIP1	1424820_a_at 1424821_at 1451493_at	14764	-0.471	-0.3069	No
115	FGD3	1433398_at 1450235_at 1454593_at	15276	-0.579	-0.3285	No
116	SLC20A1	1438824_at 1446441_at 1448568_a_at	15505	-0.627	-0.3369	No
117	ACVR2B	1419140_at 1439856_at	15762	-0.683	-0.3464	No
118	HTR2B	1422125_at	15764	-0.683	-0.3442	No
119	PTPRC	1422124_a_at 1440165_at	15964	-0.730	-0.3510	No
120	TBK1	1422469_at 1445571_at 1460315_s_at	16012	-0.742	-0.3507	No
121	GPR177	1423824_at 1423825_at 1437434_a_at 1458319_at	16216	-0.791	-0.3575	No
122	MIB2	1424862_s_at	16223	-0.792	-0.3551	No
123	BCL10	1418970_a_at 1418971_x_at 1418972_at 1443524_x_at	16226	-0.792	-0.3526	No
124	SIGIRR	1449163_at	16374	-0.830	-0.3567	No
125	RGS2	1419247_at 1419248_at 1447830_s_at	16466	-0.853	-0.3581	No
126	TGFA	1421942_s_at 1450421_at	16586	-0.880	-0.3606	No
127	SOST	1421245_at 1436240_at 1450179_at	16666	-0.904	-0.3613	No
128	MALT1	1445068_at 1456126_at 1456429_at	16762	-0.928	-0.3626	No
129	RGS4	1416286_at 1416287_at 1448285_at	16801	-0.935	-0.3613	No
130	TRADD	1429117_at 1439910_a_at 1452622_a_at	16821	-0.940	-0.3591	No
131	CDC42BPA	1435847_at 1436380_at 1438449_at 1442260_at 1446945_at	16879	-0.952	-0.3586	No
132	MAP3K7IP2	1423462_at 1451003_at	16940	-0.965	-0.3582	No
133	TMEM9B	1417874_at 1448867_at	16956	-0.967	-0.3557	No
134	SNX6	1425148_a_at 1429497_s_at 1447234_s_at 1451602_at	16960	-0.968	-0.3527	No
135	NLK	1419112_at 1435970_at 1443279_at 1445427_at 1456467_s_at	17047	-0.988	-0.3534	No
136	RGS16	1426037_a_at 1451452_a_at 1455265_a_at	17060	-0.990	-0.3507	No
137	FKBP1A	1416036_at 1438795_x_at 1438958_x_at 1448184_at 1456196_x_at	17106	-1.000	-0.3495	No
138	RGS11	1425245_a_at	17147	-1.008	-0.3480	No
139	SNF1LK2	1444472_at 1457276_at	17152	-1.010	-0.3449	No
140	ACVR1	1416786_at 1416787_at 1448460_at 1457551_at	17261	-1.031	-0.3464	No
141	IL31RA	1445095_at 1451535_at	17340	-1.045	-0.3466	No
142	RGS12	1429380_at 1453129_a_at 1457511_at 1459566_at	17709	-1.143	-0.3598	No
143	CDC42BPB	1434652_at 1459167_at	17733	-1.150	-0.3570	No
144	ENG	1417271_a_at 1432176_a_at	17860	-1.191	-0.3589	No
145	RALBP1	1417248_at 1448634_at	18047	-1.249	-0.3634	No
146	FADD	1416888_at 1446499_at	18521	-1.412	-0.3805	Yes
147	CLCF1	1437270_a_at 1437271_at 1450262_at	18607	-1.452	-0.3796	Yes
148	TRAT1	1427532_at 1437561_at	18648	-1.470	-0.3767	Yes
149	CFLAR	1424996_at 1425686_at 1425687_at 1439600_at 1449317_at	18673	-1.483	-0.3729	Yes
150	SMAD4	1422485_at 1422486_a_at 1422487_at 1444205_at	18824	-1.547	-0.3747	Yes
151	SMAD3	1450471_at 1450472_s_at 1454960_at	18838	-1.552	-0.3702	Yes
152	GRK6	1437436_s_at 1450480_a_at 1451672_at	18861	-1.565	-0.3661	Yes
153	DTX1	1425822_a_at 1458643_at	18881	-1.573	-0.3618	Yes
154	BRAP	1416738_at 1416739_a_at	18999	-1.623	-0.3619	Yes
155	EEF1E1	1444757_at 1449044_at	19040	-1.637	-0.3583	Yes
156	MAPK8IP1	1425679_a_at 1440619_at	19069	-1.648	-0.3542	Yes
157	THY1	1423135_at	19157	-1.688	-0.3527	Yes
158	RHOH	1429319_at 1441385_at 1443015_at	19162	-1.691	-0.3473	Yes
159	CITED2	1417129_a_at 1421267_a_at 1439915_at 1440091_at 1443561_at 1443926_at 1445638_at 1446176_at 1447861_x_at 1457632_s_at 1459301_at	19242	-1.728	-0.3452	Yes
160	BIRC2	1418854_at	19444	-1.821	-0.3485	Yes
161	MDFIC	1427040_at	19550	-1.886	-0.3471	Yes
162	F2R	1437308_s_at 1450852_s_at	19581	-1.907	-0.3423	Yes
163	SMURF1	1443393_at	19832	-2.107	-0.3468	Yes
164	GNG4	1417943_at 1417944_at 1447669_s_at	19838	-2.112	-0.3401	Yes
165	TAOK3	1435964_a_at 1444366_at 1444881_at 1447257_at 1455733_at	19879	-2.140	-0.3350	Yes
166	MIER1	1433755_at 1443400_at 1443879_at 1453760_at	20172	-2.396	-0.3405	Yes
167	NUP62	1415925_a_at 1415926_at 1437612_at 1438917_x_at 1447905_x_at 1448150_at	20412	-2.600	-0.3430	Yes
168	SCOTIN	1423986_a_at 1437503_a_at	20456	-2.640	-0.3363	Yes
169	ARHGAP27	1416758_at 1457655_x_at	20521	-2.728	-0.3303	Yes
170	TRAF7	1424320_a_at	20530	-2.740	-0.3216	Yes
171	TICAM1	1454676_s_at	20640	-2.878	-0.3172	Yes
172	SQSTM1	1440076_at 1442237_at 1444021_at 1450957_a_at	20674	-2.919	-0.3091	Yes
173	CDC42BPG	1436197_at	20768	-3.053	-0.3034	Yes
174	HCLS1	1418842_at	20791	-3.090	-0.2943	Yes
175	RELA	1419536_a_at	20889	-3.265	-0.2880	Yes
176	ADRB2	1437302_at	20916	-3.306	-0.2783	Yes
177	TMEM101	1451315_at	20974	-3.425	-0.2697	Yes
178	CENTD2	1428064_at	21050	-3.561	-0.2615	Yes
179	NOTCH2	1451889_at 1455556_at	21055	-3.584	-0.2499	Yes
180	MAP3K3	1426686_s_at 1426687_at 1436522_at	21072	-3.604	-0.2388	Yes
181	IKBKE	1417813_at	21092	-3.638	-0.2277	Yes
182	RAMP1	1417481_at 1447474_at	21101	-3.669	-0.2161	Yes
183	ARF6	1418822_a_at 1418823_at 1418824_at	21155	-3.761	-0.2061	Yes
184	FLNA	1426677_at	21187	-3.814	-0.1950	Yes
185	ACVR1B	1422098_at 1433725_at	21411	-4.378	-0.1909	Yes
186	TAX1BP3	1424169_at	21617	-5.254	-0.1831	Yes
187	CC2D1A	1426422_at	21646	-5.496	-0.1663	Yes
188	ATP2C1	1431196_at 1434386_at 1437738_at 1439215_at 1442742_at	21738	-6.260	-0.1500	Yes
189	CENTD3	1419833_s_at 1447407_at 1451282_at	21787	-6.947	-0.1294	Yes
190	RGS14	1419221_a_at	21801	-7.178	-0.1064	Yes
191	TAOK2	1438208_at 1443642_at 1456826_at	21829	-7.777	-0.0821	Yes
192	SOCS1	1440047_at 1450446_a_at	21837	-8.094	-0.0559	Yes
193	TNFRSF1A	1417291_at	21839	-8.146	-0.0292	Yes
194	GIT2	1423391_at 1432160_at 1435925_at	21914	-10.198	0.0009	Yes