Details for gene set V$WHN

Table: GSEA Results Summary

Dataset	Set_02_ATM_minus_versus_BT_ATM_minus.phenotype_ATM_minus_versus_BT_ATM_minus.cls #ATM_minus_versus_BT_ATM_minus.phenotype_ATM_minus_versus_BT_ATM_minus.cls #ATM_minus_versus_BT_ATM_minus_repos
Phenotype	phenotype_ATM_minus_versus_BT_ATM_minus.cls#ATM_minus_versus_BT_ATM_minus_repos
Upregulated in class	ATM_minus
GeneSet	V$WHN_B
Enrichment Score (ES)	0.276702
Normalized Enrichment Score (NES)	1.2258829
Nominal p-value	0.07398568
FDR q-value	0.48745504
FWER p-Value	1.0

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	TOMM40	1426118_a_at 1459680_at	12	9.093	0.0317	Yes
2	H3F3B	1420376_a_at 1430357_at 1455725_a_at	68	6.535	0.0524	Yes
3	AMD1	1448484_at	70	6.462	0.0753	Yes
4	HSPD1	1426351_at	218	4.943	0.0861	Yes
5	SENP2	1425465_a_at 1425466_at 1451717_s_at 1455327_at	259	4.759	0.1012	Yes
6	CCAR1	1436156_at 1436157_at 1453319_at	484	3.944	0.1049	Yes
7	MRPL12	1452048_at	495	3.920	0.1183	Yes
8	PHF5A	1424170_at	601	3.640	0.1264	Yes
9	PAPPA	1427633_a_at 1432591_at 1432592_at 1459375_at	760	3.322	0.1310	Yes
10	NOLC1	1428869_at 1428870_at 1450087_a_at	790	3.258	0.1412	Yes
11	NSF	1422455_s_at 1422456_at 1430409_at 1457205_at	1063	2.933	0.1391	Yes
12	ID2	1422537_a_at 1435176_a_at 1453596_at	1066	2.929	0.1494	Yes
13	COL4A6	1421006_at 1421007_at	1133	2.855	0.1565	Yes
14	PMP22	1417133_at	1209	2.771	0.1629	Yes
15	POU4F1	1429667_at 1429668_at	1304	2.669	0.1681	Yes
16	CDC26	1423987_at 1438605_at 1456860_at 1459540_at	1334	2.639	0.1761	Yes
17	NF1	1438067_at 1441523_at 1443097_at 1452525_a_at	1365	2.618	0.1841	Yes
18	GALK2	1438642_at 1455798_at	1466	2.523	0.1884	Yes
19	ANKRD17	1415726_at 1421220_at 1436775_a_at 1444608_at 1445826_at 1454763_at 1459952_at	1468	2.521	0.1973	Yes
20	DHX30	1416140_a_at 1438832_x_at 1438969_x_at 1453251_at	1485	2.505	0.2055	Yes
21	THRA	1426997_at 1443952_at 1454675_at	1696	2.340	0.2041	Yes
22	SUMO1	1438289_a_at 1444557_at 1451005_at 1456349_x_at	1706	2.332	0.2120	Yes
23	EIF4A1	1427058_at 1430980_a_at 1434985_a_at	1752	2.297	0.2181	Yes
24	SOX3	1435192_at 1450485_at	1921	2.177	0.2181	Yes
25	TAF5	1435474_at	1936	2.167	0.2252	Yes
26	SIX1	1427277_at	1985	2.139	0.2305	Yes
27	PTMA	1423455_at	2198	2.027	0.2280	Yes
28	SFN	1448612_at	2270	1.991	0.2318	Yes
29	NEUROG3	1422312_a_at 1432034_at	2298	1.977	0.2376	Yes
30	KLHL13	1416242_at 1448269_a_at	2385	1.944	0.2405	Yes
31	TRIB1	1424880_at 1424881_at	2419	1.929	0.2459	Yes
32	WNT1	1425377_at	2583	1.866	0.2450	Yes
33	LAPTM4A	1423368_at	2776	1.797	0.2426	Yes
34	ACO2	1436934_s_at 1442102_at 1451002_at	2867	1.764	0.2447	Yes
35	NR4A3	1421079_at 1421080_at	3065	1.702	0.2417	Yes
36	SLC30A7	1450697_at	3105	1.689	0.2459	Yes
37	GRIN2A	1421616_at	3214	1.658	0.2468	Yes
38	NRK	1436399_s_at 1450078_at 1450079_at	3242	1.651	0.2514	Yes
39	POLR2A	1422311_a_at 1426242_at 1458710_at	3378	1.608	0.2509	Yes
40	PHF15	1430081_at 1455345_at	3389	1.604	0.2562	Yes
41	FOXA1	1418496_at	3409	1.596	0.2610	Yes
42	STC2	1419503_at 1445186_at 1449484_at	3574	1.543	0.2589	Yes
43	BBS5	1429762_a_at	3622	1.528	0.2622	Yes
44	HSPE1	1450668_s_at	3667	1.516	0.2655	Yes
45	NPR3	1435184_at 1448024_at 1450286_at	3725	1.504	0.2683	Yes
46	MIB1	1433853_at 1446818_at 1451818_at 1454740_at	3879	1.457	0.2664	Yes
47	NRG1	1456524_at	3978	1.429	0.2670	Yes
48	RAB11A	1449256_a_at	4062	1.405	0.2681	Yes
49	PPP3CA	1426401_at 1438478_a_at 1440051_at 1452056_s_at 1458495_at	4066	1.403	0.2730	Yes
50	BHLHB2	1418025_at	4094	1.397	0.2767	Yes
51	SUPT16H	1419741_at 1449578_at 1456449_at	4375	1.321	0.2685	No
52	UCHL5	1419452_at 1419453_at 1455086_at 1459011_at	4580	1.263	0.2636	No
53	NKX2-2	1421112_at	4695	1.234	0.2628	No
54	NR2E1	1434921_at 1457289_at	4730	1.224	0.2656	No
55	PPARGC1A	1434099_at 1434100_x_at 1437751_at 1456395_at 1460336_at	4822	1.203	0.2656	No
56	YTHDF2	1451317_at 1460357_at	4883	1.189	0.2671	No
57	SSB	1416421_a_at 1416422_a_at 1416423_x_at 1453928_a_at	4900	1.184	0.2706	No
58	ELAVL3	1452524_a_at	4946	1.176	0.2727	No
59	JARID2	1422698_s_at 1446082_at 1450710_at 1456661_at	4965	1.170	0.2760	No
60	INSM1	1421399_at 1455865_at	5223	1.118	0.2682	No
61	NMNAT2	1436155_at	5374	1.093	0.2652	No
62	SYT4	1415844_at 1415845_at	5432	1.080	0.2664	No
63	ZCCHC9	1424557_at	5483	1.070	0.2679	No
64	CRYL1	1416795_at 1430681_at 1447112_s_at 1459589_at	5525	1.059	0.2698	No
65	WNT9B	1443197_at 1451711_at	5574	1.052	0.2713	No
66	HOXC6	1427361_at 1427362_x_at 1427454_at	5596	1.048	0.2740	No
67	RPL41	1422623_x_at 1455578_x_at	6185	0.944	0.2504	No
68	GABRG2	1418177_at 1437147_at	6336	0.918	0.2467	No
69	NUDT11	1426887_at	6480	0.887	0.2433	No
70	HOXA7	1449499_at	6706	0.849	0.2360	No
71	COL4A5	1425475_at 1425476_at	6803	0.831	0.2345	No
72	CALM2	1422414_a_at 1423807_a_at	6811	0.830	0.2371	No
73	HAPLN1	1421633_a_at 1426294_at 1426295_at 1438020_at 1445735_at 1458109_at	6953	0.807	0.2335	No
74	POU3F3	1422331_at 1435197_at	7337	0.742	0.2186	No
75	OPHN1	1419107_at 1419108_at 1456709_at	7428	0.726	0.2170	No
76	SDCBP2	1424090_at	7520	0.712	0.2153	No
77	LRP1B	1450211_at 1457235_at	7549	0.706	0.2166	No
78	SFRS12	1427134_at 1427135_at 1427136_s_at 1458056_at	7553	0.705	0.2189	No
79	CDC14B	1429418_at 1437070_at	7762	0.674	0.2118	No
80	EXTL2	1422538_at 1422539_at	7804	0.665	0.2122	No
81	SLITRK5	1429718_at	7938	0.641	0.2084	No
82	NUDT10	1435061_at	8108	0.615	0.2028	No
83	FAP	1417552_at	8288	0.586	0.1967	No
84	FSTL5	1436800_at 1439904_at	9067	0.462	0.1626	No
85	ZNF385	1418865_at	9313	0.427	0.1528	No
86	TOB2	1417309_at 1417310_at 1431776_at 1448666_s_at	9395	0.414	0.1506	No
87	SALL1	1450489_at	9429	0.410	0.1505	No
88	DNAH9	1442412_at 1457401_at	9601	0.386	0.1440	No
89	ZFHX1B	1422748_at 1434298_at 1442393_at 1445518_at 1454200_at 1456389_at	10075	0.309	0.1234	No
90	CHST11	1428902_at 1450509_at	10350	0.266	0.1117	No
91	KCTD4	1420537_at 1441801_at	10407	0.259	0.1101	No
92	HERC1	1425378_at 1434060_at 1440437_at 1440903_at	10413	0.258	0.1107	No
93	CXADR	1427321_s_at 1449949_a_at 1451865_at 1452391_at 1453282_at	10435	0.255	0.1107	No
94	DLL4	1421826_at 1421827_at	10447	0.253	0.1111	No
95	ALK	1449987_at	10573	0.234	0.1062	No
96	VAX1	1421774_at	11254	0.132	0.0754	No
97	RGL1	1418535_at 1440662_at 1449124_at	11305	0.122	0.0735	No
98	BTRC	1417325_at 1425680_a_at 1443142_at 1446925_at 1447120_at 1456780_at	11430	0.105	0.0682	No
99	EFNB1	1418285_at 1418286_a_at 1451591_a_at	11686	0.064	0.0567	No
100	HYDIN	1431589_at 1441269_at 1460106_at	11776	0.050	0.0528	No
101	ADRA2C	1422335_at 1435296_at 1439762_x_at 1457328_at	11797	0.045	0.0520	No
102	JPH2	1421453_at 1455404_at	11899	0.030	0.0475	No
103	LEF1	1421299_a_at 1436398_at 1440760_at	11938	0.024	0.0458	No
104	HOXB8	1452493_s_at	11997	0.015	0.0432	No
105	DNAJB4	1431734_a_at 1439524_at 1443611_at 1451177_at	12107	-0.002	0.0382	No
106	TBX3	1437479_x_at 1439567_at 1444594_at 1445757_at 1448029_at	12121	-0.004	0.0376	No
107	PAX3	1420389_at 1430335_a_at 1441743_at 1459148_at	12247	-0.023	0.0320	No
108	EGR3	1421486_at 1436329_at	12466	-0.064	0.0222	No
109	STAG2	1421849_at 1450396_at	12491	-0.069	0.0213	No
110	HOXB9	1452317_at	12579	-0.087	0.0176	No
111	LMO3	1455754_at	12714	-0.107	0.0118	No
112	SNCB	1418053_at	12970	-0.151	0.0007	No
113	GGPS1	1419505_a_at 1419506_at 1419805_s_at 1429356_s_at	13043	-0.165	-0.0021	No
114	GRIN2B	1422223_at 1431700_at	13195	-0.188	-0.0083	No
115	SNF1LK	1419766_at 1459601_at	13237	-0.196	-0.0095	No
116	MYH2	1425153_at	13296	-0.207	-0.0115	No
117	PRPF4	1429724_at 1438481_at	13352	-0.215	-0.0132	No
118	WNT3	1450763_x_at	13441	-0.230	-0.0165	No
119	DUSP14	1431422_a_at	13610	-0.260	-0.0233	No
120	HOXA3	1427433_s_at 1441070_at 1452421_at	13645	-0.267	-0.0239	No
121	IRX5	1421072_at	13705	-0.277	-0.0256	No
122	ONECUT1	1421447_at 1450252_at 1456974_at	13708	-0.278	-0.0247	No
123	ZBTB12	1436382_at	13720	-0.280	-0.0242	No
124	SLC25A4	1424562_a_at 1424563_at 1434897_a_at 1455069_x_at	13834	-0.297	-0.0283	No
125	ARPC5	1444568_at 1448129_at	13964	-0.320	-0.0331	No
126	HSPA14	1417095_a_at 1439826_at 1448586_at	14069	-0.338	-0.0367	No
127	DLG5	1424198_at 1431186_at 1431187_s_at	14133	-0.348	-0.0384	No
128	EAF1	1431065_at 1433555_at	14355	-0.389	-0.0472	No
129	HDAC4	1436758_at 1447566_at 1454693_at	14637	-0.445	-0.0585	No
130	JAG1	1421105_at 1421106_at 1434070_at	15082	-0.540	-0.0770	No
131	ICA1	1417901_a_at 1431644_a_at	15350	-0.593	-0.0871	No
132	CTCF	1418330_at 1449042_at	15489	-0.623	-0.0913	No
133	SLC20A1	1438824_at 1446441_at 1448568_a_at	15505	-0.627	-0.0897	No
134	GRIA3	1420563_at 1434728_at	15519	-0.629	-0.0881	No
135	KCNS3	1445519_at 1457799_at	15880	-0.711	-0.1021	No
136	EML2	1428173_at	15894	-0.714	-0.1002	No
137	RNF6	1427898_at 1427899_at	16028	-0.746	-0.1037	No
138	ZBTB11	1454826_at	16111	-0.765	-0.1047	No
139	SF3B1	1418561_at 1418562_at 1440818_s_at 1449138_at	16276	-0.805	-0.1094	No
140	SNX9	1423076_at 1423077_at	16400	-0.838	-0.1121	No
141	RFX4	1432053_at 1436931_at 1443312_at	16440	-0.846	-0.1109	No
142	ARID4B	1431024_a_at 1431031_at 1435768_at 1446317_at 1451847_s_at 1460384_a_at	16727	-0.919	-0.1207	No
143	SYNJ1	1436333_a_at 1436334_at 1439672_at 1439997_at 1454961_at	16742	-0.924	-0.1181	No
144	TOP1	1423474_at 1438495_at 1457573_at 1459672_at	16915	-0.960	-0.1226	No
145	ARIH1	1427188_at 1427189_at 1436498_at 1441022_at 1459397_at 1460090_at	16918	-0.960	-0.1193	No
146	PCDH7	1427592_at 1437442_at 1449249_at 1456214_at	16972	-0.972	-0.1183	No
147	FOXP2	1422014_at 1438231_at 1438232_at 1440108_at 1441365_at 1458191_at	17028	-0.984	-0.1173	No
148	MYO1E	1420159_at 1420160_s_at 1428509_at 1449753_at 1449941_at	17288	-1.035	-0.1255	No
149	POU3F4	1422164_at 1422165_at	17853	-1.188	-0.1472	No
150	MLLT7	1422149_at	17861	-1.191	-0.1433	No
151	JUN	1417409_at 1448694_at	18344	-1.347	-0.1607	No
152	TMEM15	1424366_at	18487	-1.400	-0.1623	No
153	TAC1	1416783_at 1419411_at 1431883_at	18676	-1.484	-0.1656	No
154	ELOVL6	1417403_at 1417404_at 1445062_at 1445578_at 1445641_at	18839	-1.552	-0.1676	No
155	MBNL1	1416904_at 1439686_at 1440315_at 1445106_at 1457924_at	19198	-1.703	-0.1780	No
156	NDOR1	1428292_at 1435388_at	19485	-1.847	-0.1845	No
157	TBX6	1449868_at	19742	-2.030	-0.1891	No
158	CAPN12	1449970_at	19847	-2.117	-0.1864	No
159	BDNF	1422168_a_at 1422169_a_at	20032	-2.284	-0.1867	No
160	HOXA9	1421579_at 1455626_at	20077	-2.315	-0.1805	No
161	CAMK4	1421941_at 1426167_a_at 1439843_at 1442822_at 1452572_at	20147	-2.379	-0.1752	No
162	JUP	1426873_s_at	20154	-2.387	-0.1670	No
163	TOB1	1423176_at 1440844_at	20379	-2.569	-0.1682	No
164	ESRRG	1421747_at 1455267_at 1457896_at	20404	-2.593	-0.1601	No
165	ZBTB4	1429722_at 1460488_at	20541	-2.753	-0.1566	No
166	NFKB2	1425902_a_at 1429128_x_at	20604	-2.837	-0.1494	No
167	NIN	1419078_at 1444155_at	20635	-2.872	-0.1405	No
168	DDX5	1419653_a_at 1423645_a_at 1433809_at 1433810_x_at 1438371_x_at 1454793_x_at	20673	-2.918	-0.1319	No
169	HPCAL1	1448812_at	20824	-3.144	-0.1276	No
170	PRDM10	1441764_at 1444812_at	20894	-3.273	-0.1192	No
171	PRSS16	1448355_at	21110	-3.685	-0.1159	No
172	DDX17	1437773_x_at 1439037_at 1452155_a_at	21379	-4.262	-0.1131	No
173	BANP	1452462_a_at	21404	-4.358	-0.0988	No
174	PFN2	1418209_a_at 1418210_at 1436993_x_at	21515	-4.764	-0.0869	No
175	MTMR4	1418150_at 1418151_at 1459874_s_at	21601	-5.193	-0.0724	No
176	SPRY2	1421656_at 1436584_at	21635	-5.415	-0.0547	No
177	H2AFZ	1441370_at	21670	-5.645	-0.0362	No
178	KLF2	1448890_at	21774	-6.770	-0.0169	No
179	JUNB	1415899_at	21777	-6.806	0.0072	No