Details for gene set V$SRF

Table: GSEA Results Summary

Dataset	Set_02_ATM_minus_versus_BT_ATM_minus.phenotype_ATM_minus_versus_BT_ATM_minus.cls #ATM_minus_versus_BT_ATM_minus.phenotype_ATM_minus_versus_BT_ATM_minus.cls #ATM_minus_versus_BT_ATM_minus_repos
Phenotype	phenotype_ATM_minus_versus_BT_ATM_minus.cls#ATM_minus_versus_BT_ATM_minus_repos
Upregulated in class	BT_ATM_minus
GeneSet	V$SRF_Q6
Enrichment Score (ES)	-0.37598014
Normalized Enrichment Score (NES)	-1.591193
Nominal p-value	0.0016949152
FDR q-value	0.116223395
FWER p-Value	0.671

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	RSU1	1419259_at	184	5.193	0.0081	No
2	ACAA2	1428145_at 1428146_s_at 1455061_a_at	319	4.457	0.0161	No
3	CABP1	1421255_a_at	454	4.007	0.0227	No
4	LDHA	1419737_a_at	455	4.006	0.0355	No
5	RBBP7	1415775_at 1456227_x_at	580	3.697	0.0416	No
6	NAV1	1436907_at 1443629_at 1446497_at	1153	2.827	0.0243	No
7	IGF2AS	1427394_at	1349	2.629	0.0237	No
8	SLC7A1	1421533_at 1454991_at 1454992_at	1360	2.622	0.0316	No
9	FOSB	1422134_at	1438	2.551	0.0361	No
10	NR2F1	1418157_at 1422412_x_at	1693	2.343	0.0319	No
11	PPARG	1420715_a_at	2109	2.076	0.0194	No
12	AQP2	1418903_at	2189	2.032	0.0223	No
13	CKM	1417614_at	2427	1.926	0.0175	No
14	FGF8	1451882_a_at	2528	1.886	0.0189	No
15	ITGA7	1418393_a_at	2586	1.866	0.0222	No
16	UBE2D3	1423112_at 1423113_a_at 1423114_at 1450858_a_at 1450859_s_at 1455479_a_at 1455480_s_at	2590	1.864	0.0280	No
17	NFATC4	1423380_s_at 1432821_at 1454369_a_at	2664	1.837	0.0305	No
18	MYL1	1452651_a_at	2697	1.826	0.0349	No
19	H3F3A	1423263_at 1442087_at	2927	1.744	0.0299	No
20	ABL1	1423999_at 1441291_at 1444134_at 1445153_at	2937	1.741	0.0350	No
21	NNAT	1423506_a_at	3515	1.561	0.0135	No
22	NPR3	1435184_at 1448024_at 1450286_at	3725	1.504	0.0086	No
23	GPR20	1440021_at	3751	1.495	0.0123	No
24	PDLIM4	1417928_at	3965	1.434	0.0070	No
25	EPHB1	1455188_at	4098	1.396	0.0054	No
26	ACTN1	1427385_s_at 1428585_at 1452415_at	4138	1.384	0.0080	No
27	RAP1A	1424139_at	4179	1.374	0.0106	No
28	CNN1	1417917_at	4354	1.326	0.0068	No
29	ACTR3	1426392_a_at 1434968_a_at 1452051_at	4398	1.316	0.0090	No
30	MSX1	1417127_at 1448601_s_at	4402	1.315	0.0130	No
31	GPR158	1438526_at 1459430_at	4576	1.263	0.0091	No
32	STARD13	1452604_at	4689	1.235	0.0079	No
33	NKX2-2	1421112_at	4695	1.234	0.0116	No
34	COL1A2	1446326_at 1450857_a_at	4933	1.178	0.0044	No
35	CFL1	1448346_at 1455138_x_at	5119	1.138	-0.0004	No
36	EMILIN2	1435264_at	5190	1.126	-0.0001	No
37	INSM1	1421399_at 1455865_at	5223	1.118	0.0020	No
38	PDLIM3	1443299_at 1449178_at	5340	1.097	0.0002	No
39	PRDM1	1420425_at 1444997_at	5344	1.097	0.0035	No
40	ATF4	1438992_x_at 1439258_at 1448135_at	5552	1.054	-0.0026	No
41	MYL9	1452670_at	5834	1.004	-0.0124	No
42	HOXB5	1418415_at	5953	0.981	-0.0147	No
43	COL1A1	1423669_at 1455494_at	6093	0.957	-0.0180	No
44	NOL4	1430189_at 1441447_at 1456387_at	6202	0.942	-0.0200	No
45	PLCB3	1448661_at	6320	0.920	-0.0224	No
46	MAPKAPK2	1426648_at	6416	0.901	-0.0239	No
47	HOXA5	1443803_x_at 1448926_at	6417	0.901	-0.0211	No
48	HOXD13	1422239_at 1440626_at	6446	0.895	-0.0195	No
49	SYNCRIP	1422768_at 1422769_at 1426402_at 1428546_at 1450743_s_at	6583	0.870	-0.0230	No
50	PDLIM7	1417959_at 1428319_at 1443785_x_at	6604	0.868	-0.0211	No
51	IGF1	1419519_at 1436497_at 1437401_at 1452014_a_at	6733	0.843	-0.0243	No
52	KCNA1	1417416_at 1437230_at 1442413_at 1455785_at	6942	0.809	-0.0313	No
53	ELAVL4	1428741_at 1450258_a_at 1452894_at 1457399_at	7074	0.783	-0.0349	No
54	ASPH	1420959_at 1425274_at 1425275_at 1426015_s_at 1436455_at 1450058_at	7105	0.778	-0.0338	No
55	RHOJ	1418892_at 1444982_at	7280	0.751	-0.0394	No
56	DMPK	1422989_a_at 1434944_at	7439	0.724	-0.0443	No
57	CSMD3	1438272_at 1438572_at 1454245_at	7445	0.723	-0.0423	No
58	GADD45G	1453851_a_at	7540	0.708	-0.0443	No
59	LRRTM4	1437214_at 1455937_at	7698	0.683	-0.0494	No
60	MYL7	1449071_at	7860	0.656	-0.0547	No
61	RARB	1454906_at	7891	0.650	-0.0540	No
62	TAGLN	1423505_at	7965	0.638	-0.0553	No
63	RIMS1	1435667_at 1438305_at 1444393_at	8049	0.623	-0.0572	No
64	TPM3	1427260_a_at 1427567_a_at 1436958_x_at 1449996_a_at 1449997_at	8127	0.612	-0.0588	No
65	LPP	1425673_at 1436714_at 1437235_x_at 1438271_at 1440167_s_at 1454899_at 1455314_at	8165	0.606	-0.0585	No
66	NKX6-1	1425828_at	8475	0.559	-0.0710	No
67	MATR3	1434888_a_at 1438368_a_at 1441272_at 1450874_at 1458508_at	8490	0.556	-0.0698	No
68	PRELP	1416321_s_at 1416322_at	8498	0.555	-0.0684	No
69	CALD1	1424768_at 1424769_s_at 1424770_at 1433146_at 1433147_at 1458057_at	8509	0.553	-0.0671	No
70	TRDN	1426134_at 1426142_a_at 1426143_at 1426144_x_at 1451801_at 1451940_x_at	8665	0.525	-0.0726	No
71	NPAS2	1421036_at 1421037_at	8861	0.493	-0.0799	No
72	SCN3B	1426328_a_at 1435767_at	9130	0.453	-0.0908	No
73	SRF	1418255_s_at 1418256_at	9309	0.428	-0.0977	No
74	RAI2	1452358_at	9372	0.418	-0.0992	No
75	RASD2	1427343_at 1427344_s_at 1458433_at	9448	0.407	-0.1013	No
76	NPPA	1456062_at	9549	0.393	-0.1047	No
77	SVIL	1427662_at 1460694_s_at 1460735_at	9563	0.391	-0.1040	No
78	TCF8	1418926_at 1420243_at 1443005_at 1443203_at 1446127_at 1456686_at	9615	0.383	-0.1052	No
79	DIXDC1	1425256_a_at 1435207_at 1443957_at 1444395_at	9904	0.337	-0.1173	No
80	DHH	1422127_at 1434959_at	10024	0.318	-0.1218	No
81	PLN	1423359_at 1450952_at 1460332_at	10163	0.298	-0.1272	No
82	MYO18B	1431813_at	10339	0.267	-0.1344	No
83	SRD5A2	1422960_at	10355	0.265	-0.1342	No
84	HERC1	1425378_at 1434060_at 1440437_at 1440903_at	10413	0.258	-0.1360	No
85	HIVEP3	1421150_at 1429134_at 1439660_at 1450132_at 1458802_at	10661	0.221	-0.1467	No
86	ATP1A2	1427465_at 1434893_at 1443823_s_at 1452308_a_at 1455136_at	10943	0.179	-0.1591	No
87	SIX2	1427436_at	11070	0.159	-0.1644	No
88	SLC4A3	1418485_at 1453687_at	11512	0.092	-0.1844	No
89	JPH2	1421453_at 1455404_at	11899	0.030	-0.2020	No
90	HOXB4	1451761_at 1460379_at	12097	-0.000	-0.2111	No
91	RAB27A	1425284_a_at 1425285_a_at 1429123_at 1454438_at	12310	-0.036	-0.2207	No
92	TNNC1	1418370_at	12436	-0.059	-0.2263	No
93	EGR3	1421486_at 1436329_at	12466	-0.064	-0.2274	No
94	IL17B	1431693_a_at	12621	-0.093	-0.2342	No
95	CX3CL1	1415803_at 1415804_at 1421610_at 1441884_x_at	12691	-0.104	-0.2370	No
96	HIST1H4I	1424854_at	12856	-0.131	-0.2442	No
97	PPP2R3A	1455198_a_at	12979	-0.152	-0.2493	No
98	PPAP2B	1429514_at 1446850_at 1448908_at	13093	-0.172	-0.2539	No
99	SDPR	1416778_at 1416779_at 1443832_s_at	13110	-0.176	-0.2541	No
100	EFHD1	1448507_at	13238	-0.197	-0.2593	No
101	FOSL1	1417487_at 1417488_at	13244	-0.198	-0.2589	No
102	TLE3	1419654_at 1419655_at 1449554_at 1458512_at	13258	-0.200	-0.2589	No
103	KCNMB1	1421400_at 1421401_at	13370	-0.218	-0.2633	No
104	TITF1	1422346_at	13391	-0.221	-0.2635	No
105	HOXA3	1427433_s_at 1441070_at 1452421_at	13645	-0.267	-0.2743	No
106	SP7	1418425_at	13736	-0.283	-0.2776	No
107	SLC25A4	1424562_a_at 1424563_at 1434897_a_at 1455069_x_at	13834	-0.297	-0.2811	No
108	TPM2	1419738_a_at 1419739_at 1425028_a_at 1449577_x_at	14142	-0.350	-0.2941	No
109	CORO1C	1417752_at 1419911_at 1437721_at 1442972_at 1449660_s_at 1459169_at	14392	-0.397	-0.3043	No
110	GNG8	1457755_at	14475	-0.415	-0.3067	No
111	ITGB1BP2	1423238_at	14508	-0.421	-0.3068	No
112	DVL3	1420457_at	14636	-0.445	-0.3113	No
113	PODN	1435180_at	14754	-0.470	-0.3152	No
114	HOXA1	1420565_at	14879	-0.496	-0.3193	No
115	CNN2	1450981_at	14942	-0.509	-0.3205	No
116	HOXC5	1439885_at 1450832_at 1456301_at	14953	-0.511	-0.3193	No
117	HOXD10	1418606_at	15066	-0.536	-0.3228	No
118	MYH11	1418122_at 1448962_at	15076	-0.538	-0.3215	No
119	SCOC	1416267_at 1430999_a_at	15077	-0.539	-0.3198	No
120	KIF1B	1423994_at 1423995_at 1425270_at 1451200_at 1451642_at 1451762_a_at 1455182_at 1458426_at	15120	-0.548	-0.3200	No
121	VCL	1416156_at 1416157_at 1445256_at	15322	-0.587	-0.3273	No
122	TES	1424246_a_at 1440649_at 1460378_a_at	15595	-0.649	-0.3378	No
123	KRTCAP2	1417058_a_at 1417059_at	15693	-0.671	-0.3401	No
124	MYL6	1435041_at	15833	-0.697	-0.3443	No
125	MRGPRF	1425894_at	15915	-0.718	-0.3457	No
126	TADA3L	1417467_a_at 1448719_at	15996	-0.736	-0.3471	No
127	FOS	1423100_at	16185	-0.784	-0.3532	No
128	MAP1A	1460566_at	16197	-0.786	-0.3512	No
129	TNMD	1417979_at	16611	-0.887	-0.3674	No
130	CFL2	1418066_at 1418067_at 1431432_at	16799	-0.935	-0.3730	Yes
131	PPP1R12A	1429487_at 1437734_at 1437735_at 1444762_at 1444834_at 1453163_at	16831	-0.943	-0.3714	Yes
132	AGL	1429083_at 1431032_at 1431033_x_at	16836	-0.945	-0.3686	Yes
133	ABR	1433477_at	16861	-0.949	-0.3667	Yes
134	DGKG	1419756_at 1431167_at 1449584_at	16929	-0.963	-0.3667	Yes
135	PCDH7	1427592_at 1437442_at 1449249_at 1456214_at	16972	-0.972	-0.3655	Yes
136	FOXP2	1422014_at 1438231_at 1438232_at 1440108_at 1441365_at 1458191_at	17028	-0.984	-0.3649	Yes
137	DMD	1417307_at 1430320_at 1446156_at 1448665_at 1457022_at	17050	-0.989	-0.3627	Yes
138	DUSP10	1417163_at 1417164_at	17100	-1.000	-0.3618	Yes
139	PRM1	1415955_x_at 1437054_x_at 1439379_x_at	17111	-1.001	-0.3591	Yes
140	MYO1E	1420159_at 1420160_s_at 1428509_at 1449753_at 1449941_at	17288	-1.035	-0.3639	Yes
141	JMJD1A	1426810_at	17499	-1.090	-0.3701	Yes
142	WNT5A	1436791_at 1448818_at 1456976_at	17591	-1.113	-0.3707	Yes
143	TRIM46	1460568_at	17684	-1.135	-0.3713	Yes
144	BLOC1S1	1422614_s_at	17715	-1.145	-0.3691	Yes
145	CACNA1B	1425812_a_at 1436602_x_at 1439612_at 1460608_at	17852	-1.188	-0.3715	Yes
146	POU3F4	1422164_at 1422165_at	17853	-1.188	-0.3677	Yes
147	ADAMTS12	1439827_at 1446666_at	17993	-1.233	-0.3702	Yes
148	ROCK2	1423592_at 1451041_at	18027	-1.242	-0.3678	Yes
149	ARPC4	1423588_at 1423589_at	18037	-1.245	-0.3642	Yes
150	FOXP3	1420765_a_at 1457082_at	18112	-1.270	-0.3636	Yes
151	MYADM	1423321_at 1439389_s_at	18189	-1.294	-0.3629	Yes
152	FOXE3	1422393_at	18229	-1.307	-0.3606	Yes
153	CSNK1E	1417175_at 1417176_at 1435373_at	18371	-1.356	-0.3627	Yes
154	SEPX1	1418888_a_at	18491	-1.401	-0.3637	Yes
155	SIN3A	1419101_at 1419102_at 1419900_at 1449343_s_at	18534	-1.418	-0.3612	Yes
156	PRKAB2	1435874_at 1435875_at 1442001_at	18564	-1.433	-0.3579	Yes
157	CHD6	1427384_at 1431047_at	18677	-1.484	-0.3584	Yes
158	NR2F2	1416158_at 1416159_at 1416160_at 1431237_at 1444229_at	18768	-1.523	-0.3576	Yes
159	FGFRL1	1447878_s_at 1451912_a_at	18812	-1.543	-0.3547	Yes
160	GRK6	1437436_s_at 1450480_a_at 1451672_at	18861	-1.565	-0.3519	Yes
161	KCNK3	1425341_at 1425342_a_at 1426058_a_at	18960	-1.606	-0.3513	Yes
162	MBNL1	1416904_at 1439686_at 1440315_at 1445106_at 1457924_at	19198	-1.703	-0.3568	Yes
163	CITED2	1417129_a_at 1421267_a_at 1439915_at 1440091_at 1443561_at 1443926_at 1445638_at 1446176_at 1447861_x_at 1457632_s_at 1459301_at	19242	-1.728	-0.3533	Yes
164	RRM1	1415878_at 1440073_at 1448127_at	19304	-1.758	-0.3505	Yes
165	TGFB1I1	1418136_at	19324	-1.767	-0.3457	Yes
166	ACTB	1419734_at 1436722_a_at 1440365_at AFFX-b-ActinMur/M12481_3_at AFFX-b-ActinMur/M12481_5_at AFFX-b-ActinMur/M12481_M_at	19459	-1.836	-0.3460	Yes
167	EML4	1429612_at 1447838_x_at	19761	-2.043	-0.3534	Yes
168	PFN1	1449018_at	19877	-2.140	-0.3518	Yes
169	CDKN1B	1419497_at 1434045_at	19998	-2.247	-0.3502	Yes
170	BDNF	1422168_a_at 1422169_a_at	20032	-2.284	-0.3444	Yes
171	MYLK	1425504_at 1425505_at 1425506_at	20246	-2.447	-0.3464	Yes
172	PICALM	1441328_at 1443218_at 1446968_at 1451316_a_at 1455773_at	20306	-2.500	-0.3412	Yes
173	LDB3	1416752_at 1433783_at 1451999_at	20384	-2.574	-0.3365	Yes
174	FOXP1	1421140_a_at 1421141_a_at 1421142_s_at 1435222_at 1438802_at 1443258_at 1446280_at 1447209_at 1455242_at 1456851_at	20879	-3.250	-0.3489	Yes
175	PHF12	1434922_at 1453579_at	20886	-3.262	-0.3388	Yes
176	ACTG2	1422340_a_at	20925	-3.331	-0.3299	Yes
177	ACTA1	1427735_a_at	20946	-3.379	-0.3201	Yes
178	CTDSP1	1452055_at	20982	-3.439	-0.3107	Yes
179	FST	1421365_at 1434458_at	21001	-3.464	-0.3005	Yes
180	RERE	1454670_at	21002	-3.466	-0.2895	Yes
181	MUS81	1431885_a_at 1450432_s_at	21041	-3.543	-0.2799	Yes
182	TAZ	1416207_at 1453785_at	21053	-3.577	-0.2690	Yes
183	LRRFIP1	1433842_at 1437477_at 1448487_at	21089	-3.632	-0.2591	Yes
184	RUNDC1	1454829_at	21182	-3.806	-0.2512	Yes
185	FLNA	1426677_at	21187	-3.814	-0.2392	Yes
186	H2AFX	1416746_at	21191	-3.824	-0.2272	Yes
187	SIPA1	1416206_at	21252	-3.966	-0.2173	Yes
188	UNC84B	1433832_at 1439238_at	21316	-4.110	-0.2071	Yes
189	NR4A1	1416505_at	21376	-4.260	-0.1962	Yes
190	DUSP2	1450698_at	21513	-4.754	-0.1873	Yes
191	MAP2K6	1426850_a_at 1459292_at	21619	-5.264	-0.1754	Yes
192	DUSP5	1437199_at	21687	-5.738	-0.1602	Yes
193	STAT5B	1422102_a_at 1422103_a_at	21715	-6.071	-0.1421	Yes
194	JUNB	1415899_at	21777	-6.806	-0.1232	Yes
195	RASSF2	1428392_at 1444889_at	21791	-7.011	-0.1015	Yes
196	EGR1	1417065_at	21803	-7.184	-0.0791	Yes
197	ANXA6	1415818_at 1429246_a_at 1429247_at 1442288_at	21843	-8.231	-0.0547	Yes
198	EGR2	1427682_a_at 1427683_at	21881	-9.155	-0.0272	Yes
199	LSP1	1417756_a_at	21884	-9.285	0.0023	Yes