Details for gene set V$SRF_Q5

Table: GSEA Results Summary

Dataset	Set_02_ATM_minus_versus_BT_ATM_minus.phenotype_ATM_minus_versus_BT_ATM_minus.cls #ATM_minus_versus_BT_ATM_minus.phenotype_ATM_minus_versus_BT_ATM_minus.cls #ATM_minus_versus_BT_ATM_minus_repos
Phenotype	phenotype_ATM_minus_versus_BT_ATM_minus.cls#ATM_minus_versus_BT_ATM_minus_repos
Upregulated in class	BT_ATM_minus
GeneSet	V$SRF_Q5_01
Enrichment Score (ES)	-0.41028252
Normalized Enrichment Score (NES)	-1.7195626
Nominal p-value	0.0
FDR q-value	0.049015723
FWER p-Value	0.218

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	RSU1	1419259_at	184	5.193	0.0098	No
2	PELI2	1419006_s_at 1436966_at 1437181_at	493	3.923	0.0095	No
3	DSTN	1417124_at	526	3.843	0.0216	No
4	RBBP7	1415775_at 1456227_x_at	580	3.697	0.0322	No
5	LCP1	1415983_at 1448160_at	1102	2.896	0.0184	No
6	IGF2AS	1427394_at	1349	2.629	0.0164	No
7	FOSB	1422134_at	1438	2.551	0.0214	No
8	NR2F1	1418157_at 1422412_x_at	1693	2.343	0.0179	No
9	ATF3	1449363_at	1791	2.270	0.0215	No
10	PPARG	1420715_a_at	2109	2.076	0.0142	No
11	SLC16A6	1417884_at	2233	2.009	0.0157	No
12	CKM	1417614_at	2427	1.926	0.0136	No
13	FGF8	1451882_a_at	2528	1.886	0.0156	No
14	NFATC4	1423380_s_at 1432821_at 1454369_a_at	2664	1.837	0.0159	No
15	H3F3A	1423263_at 1442087_at	2927	1.744	0.0100	No
16	SLC2A4	1415958_at 1415959_at	3009	1.719	0.0123	No
17	SERTAD4	1454877_at	3015	1.718	0.0182	No
18	TANK	1421640_a_at 1441513_at 1459668_at	3295	1.637	0.0111	No
19	CSDA	1435800_a_at 1451012_a_at	3641	1.522	0.0006	No
20	NPR3	1435184_at 1448024_at 1450286_at	3725	1.504	0.0021	No
21	GPR20	1440021_at	3751	1.495	0.0062	No
22	ACTN1	1427385_s_at 1428585_at 1452415_at	4138	1.384	-0.0067	No
23	CNN1	1417917_at	4354	1.326	-0.0119	No
24	ACTR3	1426392_a_at 1434968_a_at 1452051_at	4398	1.316	-0.0092	No
25	STARD13	1452604_at	4689	1.235	-0.0182	No
26	NKX2-2	1421112_at	4695	1.234	-0.0141	No
27	ADAMTSL1	1430313_at	4830	1.202	-0.0160	No
28	CFL1	1448346_at 1455138_x_at	5119	1.138	-0.0252	No
29	EMILIN2	1435264_at	5190	1.126	-0.0245	No
30	ATF4	1438992_x_at 1439258_at 1448135_at	5552	1.054	-0.0373	No
31	FLNC	1424063_at 1447812_x_at 1449073_at	5798	1.009	-0.0450	No
32	MYL9	1452670_at	5834	1.004	-0.0431	No
33	GGN	1445278_at	5927	0.987	-0.0439	No
34	HOXB5	1418415_at	5953	0.981	-0.0416	No
35	COL23A1	1429209_at 1429210_at 1440911_at	6027	0.968	-0.0415	No
36	COL1A1	1423669_at 1455494_at	6093	0.957	-0.0411	No
37	PLCB3	1448661_at	6320	0.920	-0.0483	No
38	MAPKAPK2	1426648_at	6416	0.901	-0.0495	No
39	TRIM3	1451663_a_at	6452	0.893	-0.0479	No
40	FGF7	1422243_at 1438405_at	6509	0.883	-0.0474	No
41	PDLIM7	1417959_at 1428319_at 1443785_x_at	6604	0.868	-0.0486	No
42	CTNND1	1422450_at 1437448_s_at 1445830_at	6846	0.826	-0.0568	No
43	KCNA1	1417416_at 1437230_at 1442413_at 1455785_at	6942	0.809	-0.0583	No
44	ELAVL4	1428741_at 1450258_a_at 1452894_at 1457399_at	7074	0.783	-0.0616	No
45	FGF17	1421523_at 1456239_at	7134	0.773	-0.0616	No
46	RHOJ	1418892_at 1444982_at	7280	0.751	-0.0656	No
47	GADD45G	1453851_a_at	7540	0.708	-0.0750	No
48	LRRTM4	1437214_at 1455937_at	7698	0.683	-0.0798	No
49	MYL7	1449071_at	7860	0.656	-0.0849	No
50	RARB	1454906_at	7891	0.650	-0.0840	No
51	TAGLN	1423505_at	7965	0.638	-0.0851	No
52	RIMS1	1435667_at 1438305_at 1444393_at	8049	0.623	-0.0867	No
53	TPM3	1427260_a_at 1427567_a_at 1436958_x_at 1449996_a_at 1449997_at	8127	0.612	-0.0881	No
54	LPP	1425673_at 1436714_at 1437235_x_at 1438271_at 1440167_s_at 1454899_at 1455314_at	8165	0.606	-0.0877	No
55	CALD1	1424768_at 1424769_s_at 1424770_at 1433146_at 1433147_at 1458057_at	8509	0.553	-0.1015	No
56	TRDN	1426134_at 1426142_a_at 1426143_at 1426144_x_at 1451801_at 1451940_x_at	8665	0.525	-0.1067	No
57	TIMP3	1419088_at 1419089_at 1449334_at 1449335_at	8852	0.495	-0.1136	No
58	NPAS2	1421036_at 1421037_at	8861	0.493	-0.1122	No
59	SRF	1418255_s_at 1418256_at	9309	0.428	-0.1312	No
60	RAI2	1452358_at	9372	0.418	-0.1326	No
61	NPPA	1456062_at	9549	0.393	-0.1393	No
62	SVIL	1427662_at 1460694_s_at 1460735_at	9563	0.391	-0.1385	No
63	MITF	1422025_at 1455214_at	9587	0.387	-0.1382	No
64	MAPK14	1416703_at 1416704_at 1426104_at 1442364_at 1451927_a_at 1459617_at	9589	0.387	-0.1369	No
65	OTX1	1437601_at	9646	0.379	-0.1381	No
66	DIXDC1	1425256_a_at 1435207_at 1443957_at 1444395_at	9904	0.337	-0.1488	No
67	ASPA	1418472_at	10057	0.312	-0.1547	No
68	HOXC4	1422870_at	10076	0.309	-0.1544	No
69	PLN	1423359_at 1450952_at 1460332_at	10163	0.298	-0.1573	No
70	SRD5A2	1422960_at	10355	0.265	-0.1651	No
71	UBE2H	1418631_at 1418632_at 1428791_at 1438971_x_at 1447374_at 1459930_at	10362	0.265	-0.1645	No
72	CXCL5	1419728_at	10386	0.262	-0.1646	No
73	ITGB6	1422983_at 1432281_a_at	10556	0.236	-0.1715	No
74	MID1	1422055_at 1438239_at 1441929_at 1443666_at	11095	0.155	-0.1957	No
75	CALN1	1425846_a_at	11167	0.143	-0.1985	No
76	SLC4A3	1418485_at 1453687_at	11512	0.092	-0.2140	No
77	CRH	1457984_at	11569	0.085	-0.2163	No
78	ASB2	1428444_at 1436259_at	11660	0.068	-0.2202	No
79	ERBB2IP	1428011_a_at 1439079_a_at 1439080_at 1439638_at 1440573_at	11789	0.047	-0.2259	No
80	CHST8	1428977_at	11826	0.041	-0.2274	No
81	EEF1B2	1448252_a_at	11973	0.019	-0.2340	No
82	HOXB4	1451761_at 1460379_at	12097	-0.000	-0.2397	No
83	CA3	1430584_s_at 1449434_at 1453588_at 1460256_at	12305	-0.035	-0.2491	No
84	EGR3	1421486_at 1436329_at	12466	-0.064	-0.2562	No
85	DLL1	1419204_at	12503	-0.071	-0.2576	No
86	IL17B	1431693_a_at	12621	-0.093	-0.2627	No
87	ITGB8	1436223_at	12842	-0.129	-0.2723	No
88	PPP2R3A	1455198_a_at	12979	-0.152	-0.2780	No
89	NRAS	1422688_a_at 1454060_a_at	13011	-0.158	-0.2789	No
90	PPAP2B	1429514_at 1446850_at 1448908_at	13093	-0.172	-0.2820	No
91	SDPR	1416778_at 1416779_at 1443832_s_at	13110	-0.176	-0.2821	No
92	EFHD1	1448507_at	13238	-0.197	-0.2873	No
93	TLE3	1419654_at 1419655_at 1449554_at 1458512_at	13258	-0.200	-0.2874	No
94	WNT3	1450763_x_at	13441	-0.230	-0.2950	No
95	ASXL2	1439063_at 1444754_at 1453295_at 1458366_at 1460597_at	13609	-0.259	-0.3018	No
96	SLC25A4	1424562_a_at 1424563_at 1434897_a_at 1455069_x_at	13834	-0.297	-0.3110	No
97	TPM2	1419738_a_at 1419739_at 1425028_a_at 1449577_x_at	14142	-0.350	-0.3239	No
98	CORO1C	1417752_at 1419911_at 1437721_at 1442972_at 1449660_s_at 1459169_at	14392	-0.397	-0.3339	No
99	ITGB1BP2	1423238_at	14508	-0.421	-0.3377	No
100	DVL3	1420457_at	14636	-0.445	-0.3420	No
101	PODN	1435180_at	14754	-0.470	-0.3457	No
102	ABCA1	1421839_at 1421840_at 1450392_at	14875	-0.494	-0.3495	No
103	CNN2	1450981_at	14942	-0.509	-0.3507	No
104	HOXC5	1439885_at 1450832_at 1456301_at	14953	-0.511	-0.3494	No
105	BNC2	1438861_at 1440593_at 1459132_at	15002	-0.523	-0.3498	No
106	HOXD10	1418606_at	15066	-0.536	-0.3508	No
107	MYH11	1418122_at 1448962_at	15076	-0.538	-0.3493	No
108	SCOC	1416267_at 1430999_a_at	15077	-0.539	-0.3474	No
109	NRXN3	1419825_at 1431153_at 1432931_at 1433788_at 1438193_at 1439629_at 1442423_at 1444700_at 1456137_at 1460101_at	15119	-0.547	-0.3473	No
110	VCL	1416156_at 1416157_at 1445256_at	15322	-0.587	-0.3546	No
111	KRTCAP2	1417058_a_at 1417059_at	15693	-0.671	-0.3692	No
112	MRPS21	1422451_at	15773	-0.685	-0.3704	No
113	MYL6	1435041_at	15833	-0.697	-0.3707	No
114	MRGPRF	1425894_at	15915	-0.718	-0.3719	No
115	TADA3L	1417467_a_at 1448719_at	15996	-0.736	-0.3729	No
116	SGK	1416041_at	16074	-0.755	-0.3738	No
117	FOS	1423100_at	16185	-0.784	-0.3761	No
118	MAP1A	1460566_at	16197	-0.786	-0.3739	No
119	THRAP1	1436904_at 1438725_at 1444068_at 1446840_at 1453160_at 1453161_at	16470	-0.854	-0.3833	No
120	TNMD	1417979_at	16611	-0.887	-0.3867	No
121	CFL2	1418066_at 1418067_at 1431432_at	16799	-0.935	-0.3920	No
122	PPP1R12A	1429487_at 1437734_at 1437735_at 1444762_at 1444834_at 1453163_at	16831	-0.943	-0.3901	No
123	ABR	1433477_at	16861	-0.949	-0.3880	No
124	DGKG	1419756_at 1431167_at 1449584_at	16929	-0.963	-0.3877	No
125	PCDH7	1427592_at 1437442_at 1449249_at 1456214_at	16972	-0.972	-0.3862	No
126	FOXP2	1422014_at 1438231_at 1438232_at 1440108_at 1441365_at 1458191_at	17028	-0.984	-0.3853	No
127	DUSP10	1417163_at 1417164_at	17100	-1.000	-0.3850	No
128	PRM1	1415955_x_at 1437054_x_at 1439379_x_at	17111	-1.001	-0.3820	No
129	MYO1E	1420159_at 1420160_s_at 1428509_at 1449753_at 1449941_at	17288	-1.035	-0.3864	No
130	JMJD1A	1426810_at	17499	-1.090	-0.3922	No
131	TRIM46	1460568_at	17684	-1.135	-0.3967	No
132	BLOC1S1	1422614_s_at	17715	-1.145	-0.3940	No
133	CACNA1B	1425812_a_at 1436602_x_at 1439612_at 1460608_at	17852	-1.188	-0.3961	No
134	MLLT7	1422149_at	17861	-1.191	-0.3922	No
135	ARPC4	1423588_at 1423589_at	18037	-1.245	-0.3959	No
136	MYADM	1423321_at 1439389_s_at	18189	-1.294	-0.3983	No
137	FOXE3	1422393_at	18229	-1.307	-0.3955	No
138	CHD2	1444246_at 1445843_at	18369	-1.355	-0.3971	No
139	PRKAB2	1435874_at 1435875_at 1442001_at	18564	-1.433	-0.4010	No
140	NR2F2	1416158_at 1416159_at 1416160_at 1431237_at 1444229_at	18768	-1.523	-0.4049	Yes
141	FGFRL1	1447878_s_at 1451912_a_at	18812	-1.543	-0.4015	Yes
142	GRK6	1437436_s_at 1450480_a_at 1451672_at	18861	-1.565	-0.3981	Yes
143	KCNK3	1425341_at 1425342_a_at 1426058_a_at	18960	-1.606	-0.3970	Yes
144	MBNL1	1416904_at 1439686_at 1440315_at 1445106_at 1457924_at	19198	-1.703	-0.4019	Yes
145	CITED2	1417129_a_at 1421267_a_at 1439915_at 1440091_at 1443561_at 1443926_at 1445638_at 1446176_at 1447861_x_at 1457632_s_at 1459301_at	19242	-1.728	-0.3978	Yes
146	TGFB1I1	1418136_at	19324	-1.767	-0.3953	Yes
147	LDB1	1452024_a_at	19436	-1.817	-0.3940	Yes
148	ACTB	1419734_at 1436722_a_at 1440365_at AFFX-b-ActinMur/M12481_3_at AFFX-b-ActinMur/M12481_5_at AFFX-b-ActinMur/M12481_M_at	19459	-1.836	-0.3885	Yes
149	EML4	1429612_at 1447838_x_at	19761	-2.043	-0.3951	Yes
150	TAF5L	1448195_at	19865	-2.133	-0.3923	Yes
151	PFN1	1449018_at	19877	-2.140	-0.3853	Yes
152	CDKN1B	1419497_at 1434045_at	19998	-2.247	-0.3829	Yes
153	MYLK	1425504_at 1425505_at 1425506_at	20246	-2.447	-0.3856	Yes
154	PICALM	1441328_at 1443218_at 1446968_at 1451316_a_at 1455773_at	20306	-2.500	-0.3795	Yes
155	IER2	1416442_at	20772	-3.058	-0.3901	Yes
156	CASQ1	1422598_at	20840	-3.178	-0.3820	Yes
157	FOXP1	1421140_a_at 1421141_a_at 1421142_s_at 1435222_at 1438802_at 1443258_at 1446280_at 1447209_at 1455242_at 1456851_at	20879	-3.250	-0.3723	Yes
158	PHF12	1434922_at 1453579_at	20886	-3.262	-0.3611	Yes
159	ACTG2	1422340_a_at	20925	-3.331	-0.3511	Yes
160	ACTA1	1427735_a_at	20946	-3.379	-0.3401	Yes
161	RERE	1454670_at	21002	-3.466	-0.3304	Yes
162	VASP	1451097_at	21020	-3.497	-0.3189	Yes
163	MUS81	1431885_a_at 1450432_s_at	21041	-3.543	-0.3073	Yes
164	TAZ	1416207_at 1453785_at	21053	-3.577	-0.2952	Yes
165	LRRFIP1	1433842_at 1437477_at 1448487_at	21089	-3.632	-0.2840	Yes
166	ARF6	1418822_a_at 1418823_at 1418824_at	21155	-3.761	-0.2737	Yes
167	RUNDC1	1454829_at	21182	-3.806	-0.2615	Yes
168	FLNA	1426677_at	21187	-3.814	-0.2482	Yes
169	H2AFX	1416746_at	21191	-3.824	-0.2349	Yes
170	UNC84B	1433832_at 1439238_at	21316	-4.110	-0.2261	Yes
171	CSRP1	1425810_a_at 1425811_a_at	21393	-4.306	-0.2144	Yes
172	CDC25B	1421963_a_at	21548	-4.910	-0.2042	Yes
173	MAP2K6	1426850_a_at 1459292_at	21619	-5.264	-0.1889	Yes
174	DUSP5	1437199_at	21687	-5.738	-0.1717	Yes
175	STAT5B	1422102_a_at 1422103_a_at	21715	-6.071	-0.1515	Yes
176	JUNB	1415899_at	21777	-6.806	-0.1304	Yes
177	RASSF2	1428392_at 1444889_at	21791	-7.011	-0.1062	Yes
178	EGR1	1417065_at	21803	-7.184	-0.0814	Yes
179	KCNH2	1449544_a_at	21814	-7.384	-0.0559	Yes
180	ANXA6	1415818_at 1429246_a_at 1429247_at 1442288_at	21843	-8.231	-0.0281	Yes
181	EGR2	1427682_a_at 1427683_at	21881	-9.155	0.0024	Yes