Details for gene set V$SRF

Table: GSEA Results Summary

Dataset	Set_02_ATM_minus_versus_BT_ATM_minus.phenotype_ATM_minus_versus_BT_ATM_minus.cls #ATM_minus_versus_BT_ATM_minus.phenotype_ATM_minus_versus_BT_ATM_minus.cls #ATM_minus_versus_BT_ATM_minus_repos
Phenotype	phenotype_ATM_minus_versus_BT_ATM_minus.cls#ATM_minus_versus_BT_ATM_minus_repos
Upregulated in class	BT_ATM_minus
GeneSet	V$SRF_Q4
Enrichment Score (ES)	-0.42307147
Normalized Enrichment Score (NES)	-1.8054414
Nominal p-value	0.0
FDR q-value	0.03035556
FWER p-Value	0.083

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	TPM1	1423049_a_at 1423721_at 1447713_at 1456623_at	5	9.273	0.0324	No
2	RSU1	1419259_at	184	5.193	0.0425	No
3	DSTN	1417124_at	526	3.843	0.0404	No
4	RBBP7	1415775_at 1456227_x_at	580	3.697	0.0509	No
5	IGF2AS	1427394_at	1349	2.629	0.0249	No
6	FOSB	1422134_at	1438	2.551	0.0298	No
7	NR2F1	1418157_at 1422412_x_at	1693	2.343	0.0264	No
8	IHPK1	1422968_at 1422969_s_at 1438845_at 1438846_x_at 1452694_at	2082	2.084	0.0159	No
9	PPARG	1420715_a_at	2109	2.076	0.0220	No
10	CKM	1417614_at	2427	1.926	0.0142	No
11	FGF8	1451882_a_at	2528	1.886	0.0163	No
12	TGIF	1422286_a_at	2692	1.827	0.0152	No
13	MYL1	1452651_a_at	2697	1.826	0.0215	No
14	SERTAD4	1454877_at	3015	1.718	0.0129	No
15	TANK	1421640_a_at 1441513_at 1459668_at	3295	1.637	0.0059	No
16	CSDA	1435800_a_at 1451012_a_at	3641	1.522	-0.0046	No
17	NPR3	1435184_at 1448024_at 1450286_at	3725	1.504	-0.0032	No
18	GPR20	1440021_at	3751	1.495	0.0010	No
19	ACTN1	1427385_s_at 1428585_at 1452415_at	4138	1.384	-0.0119	No
20	CNN1	1417917_at	4354	1.326	-0.0171	No
21	MSX1	1417127_at 1448601_s_at	4402	1.315	-0.0147	No
22	NKX2-2	1421112_at	4695	1.234	-0.0237	No
23	ADAMTSL1	1430313_at	4830	1.202	-0.0257	No
24	RAB30	1426452_a_at	5013	1.158	-0.0299	No
25	MYO1B	1427450_x_at 1441210_at 1447364_x_at 1448989_a_at 1448990_a_at 1458007_at 1459679_s_at	5064	1.149	-0.0282	No
26	SERPINH1	1450843_a_at 1456733_x_at	5113	1.139	-0.0264	No
27	CFL1	1448346_at 1455138_x_at	5119	1.138	-0.0226	No
28	EMILIN2	1435264_at	5190	1.126	-0.0219	No
29	INSM1	1421399_at 1455865_at	5223	1.118	-0.0194	No
30	MYL9	1452670_at	5834	1.004	-0.0439	No
31	TMOD1	1419863_at 1422754_at	5862	0.998	-0.0416	No
32	HOXB5	1418415_at	5953	0.981	-0.0423	No
33	COL23A1	1429209_at 1429210_at 1440911_at	6027	0.968	-0.0423	No
34	NLGN3	1456384_at	6100	0.956	-0.0422	No
35	PLCB3	1448661_at	6320	0.920	-0.0490	No
36	MAPKAPK2	1426648_at	6416	0.901	-0.0502	No
37	HOXA5	1443803_x_at 1448926_at	6417	0.901	-0.0471	No
38	AKAP12	1419706_a_at 1458235_at	6483	0.887	-0.0469	No
39	EDN1	1451924_a_at	6714	0.847	-0.0545	No
40	KCNA1	1417416_at 1437230_at 1442413_at 1455785_at	6942	0.809	-0.0621	No
41	ELAVL4	1428741_at 1450258_a_at 1452894_at 1457399_at	7074	0.783	-0.0654	No
42	ASPH	1420959_at 1425274_at 1425275_at 1426015_s_at 1436455_at 1450058_at	7105	0.778	-0.0640	No
43	FGF17	1421523_at 1456239_at	7134	0.773	-0.0626	No
44	RHOJ	1418892_at 1444982_at	7280	0.751	-0.0666	No
45	GADD45G	1453851_a_at	7540	0.708	-0.0760	No
46	LRRTM4	1437214_at 1455937_at	7698	0.683	-0.0808	No
47	MYL7	1449071_at	7860	0.656	-0.0859	No
48	RARB	1454906_at	7891	0.650	-0.0850	No
49	TAGLN	1423505_at	7965	0.638	-0.0861	No
50	RIMS1	1435667_at 1438305_at 1444393_at	8049	0.623	-0.0877	No
51	TPM3	1427260_a_at 1427567_a_at 1436958_x_at 1449996_a_at 1449997_at	8127	0.612	-0.0891	No
52	LPP	1425673_at 1436714_at 1437235_x_at 1438271_at 1440167_s_at 1454899_at 1455314_at	8165	0.606	-0.0887	No
53	CTGF	1416953_at	8201	0.600	-0.0882	No
54	CALD1	1424768_at 1424769_s_at 1424770_at 1433146_at 1433147_at 1458057_at	8509	0.553	-0.1004	No
55	NPAS2	1421036_at 1421037_at	8861	0.493	-0.1147	No
56	EGR4	1449977_at	9046	0.466	-0.1216	No
57	SRF	1418255_s_at 1418256_at	9309	0.428	-0.1321	No
58	RASD2	1427343_at 1427344_s_at 1458433_at	9448	0.407	-0.1370	No
59	NPPA	1456062_at	9549	0.393	-0.1402	No
60	SVIL	1427662_at 1460694_s_at 1460735_at	9563	0.391	-0.1394	No
61	MAPK14	1416703_at 1416704_at 1426104_at 1442364_at 1451927_a_at 1459617_at	9589	0.387	-0.1392	No
62	SH3BGR	1422644_at	9632	0.381	-0.1398	No
63	DIXDC1	1425256_a_at 1435207_at 1443957_at 1444395_at	9904	0.337	-0.1511	No
64	ASPA	1418472_at	10057	0.312	-0.1570	No
65	SRD5A2	1422960_at	10355	0.265	-0.1697	No
66	HERC1	1425378_at 1434060_at 1440437_at 1440903_at	10413	0.258	-0.1714	No
67	MID1	1422055_at 1438239_at 1441929_at 1443666_at	11095	0.155	-0.2022	No
68	CALN1	1425846_a_at	11167	0.143	-0.2049	No
69	SLC4A3	1418485_at 1453687_at	11512	0.092	-0.2204	No
70	CRH	1457984_at	11569	0.085	-0.2227	No
71	MMP14	1416572_at 1448383_at	11651	0.069	-0.2262	No
72	ERBB2IP	1428011_a_at 1439079_a_at 1439080_at 1439638_at 1440573_at	11789	0.047	-0.2323	No
73	JPH2	1421453_at 1455404_at	11899	0.030	-0.2372	No
74	EEF1B2	1448252_a_at	11973	0.019	-0.2405	No
75	VGF	1436094_at	12041	0.008	-0.2435	No
76	HOXB4	1451761_at 1460379_at	12097	-0.000	-0.2461	No
77	TNNC1	1418370_at	12436	-0.059	-0.2614	No
78	EGR3	1421486_at 1436329_at	12466	-0.064	-0.2625	No
79	STAG2	1421849_at 1450396_at	12491	-0.069	-0.2634	No
80	DLL1	1419204_at	12503	-0.071	-0.2636	No
81	IL17B	1431693_a_at	12621	-0.093	-0.2687	No
82	CX3CL1	1415803_at 1415804_at 1421610_at 1441884_x_at	12691	-0.104	-0.2715	No
83	PPP2R3A	1455198_a_at	12979	-0.152	-0.2841	No
84	GAB2	1419829_a_at 1420785_at 1439786_at 1446860_at	13078	-0.170	-0.2880	No
85	PPAP2B	1429514_at 1446850_at 1448908_at	13093	-0.172	-0.2881	No
86	SDPR	1416778_at 1416779_at 1443832_s_at	13110	-0.176	-0.2882	No
87	EFHD1	1448507_at	13238	-0.197	-0.2933	No
88	TLE3	1419654_at 1419655_at 1449554_at 1458512_at	13258	-0.200	-0.2935	No
89	KCNMB1	1421400_at 1421401_at	13370	-0.218	-0.2978	No
90	HOXA3	1427433_s_at 1441070_at 1452421_at	13645	-0.267	-0.3095	No
91	SLC25A4	1424562_a_at 1424563_at 1434897_a_at 1455069_x_at	13834	-0.297	-0.3171	No
92	ATRX	1420945_at 1420946_at 1420947_at 1438750_at 1441014_at 1441771_at 1450051_at 1453734_at 1456832_at	13912	-0.310	-0.3195	No
93	TBL1X	1434643_at 1434644_at 1441435_at 1446736_at 1455042_at	14087	-0.340	-0.3263	No
94	TPM2	1419738_a_at 1419739_at 1425028_a_at 1449577_x_at	14142	-0.350	-0.3276	No
95	ITGB1BP2	1423238_at	14508	-0.421	-0.3429	No
96	DVL3	1420457_at	14636	-0.445	-0.3471	No
97	PODN	1435180_at	14754	-0.470	-0.3509	No
98	HOXC5	1439885_at 1450832_at 1456301_at	14953	-0.511	-0.3582	No
99	BNC2	1438861_at 1440593_at 1459132_at	15002	-0.523	-0.3585	No
100	HOXD10	1418606_at	15066	-0.536	-0.3595	No
101	MYH11	1418122_at 1448962_at	15076	-0.538	-0.3581	No
102	SCOC	1416267_at 1430999_a_at	15077	-0.539	-0.3562	No
103	VCL	1416156_at 1416157_at 1445256_at	15322	-0.587	-0.3653	No
104	KRTCAP2	1417058_a_at 1417059_at	15693	-0.671	-0.3799	No
105	MYL6	1435041_at	15833	-0.697	-0.3839	No
106	MRGPRF	1425894_at	15915	-0.718	-0.3851	No
107	TADA3L	1417467_a_at 1448719_at	15996	-0.736	-0.3862	No
108	SGK	1416041_at	16074	-0.755	-0.3870	No
109	FOS	1423100_at	16185	-0.784	-0.3893	No
110	MAP1A	1460566_at	16197	-0.786	-0.3871	No
111	THRAP1	1436904_at 1438725_at 1444068_at 1446840_at 1453160_at 1453161_at	16470	-0.854	-0.3966	No
112	ELF4	1421337_at 1445778_at	16532	-0.867	-0.3963	No
113	TNMD	1417979_at	16611	-0.887	-0.3968	No
114	CFL2	1418066_at 1418067_at 1431432_at	16799	-0.935	-0.4021	No
115	PPP1R12A	1429487_at 1437734_at 1437735_at 1444762_at 1444834_at 1453163_at	16831	-0.943	-0.4002	No
116	ABR	1433477_at	16861	-0.949	-0.3982	No
117	DGKG	1419756_at 1431167_at 1449584_at	16929	-0.963	-0.3979	No
118	FOXP2	1422014_at 1438231_at 1438232_at 1440108_at 1441365_at 1458191_at	17028	-0.984	-0.3989	No
119	DMD	1417307_at 1430320_at 1446156_at 1448665_at 1457022_at	17050	-0.989	-0.3964	No
120	PRM1	1415955_x_at 1437054_x_at 1439379_x_at	17111	-1.001	-0.3956	No
121	MYO1E	1420159_at 1420160_s_at 1428509_at 1449753_at 1449941_at	17288	-1.035	-0.4001	No
122	JMJD1A	1426810_at	17499	-1.090	-0.4059	No
123	TRIM46	1460568_at	17684	-1.135	-0.4104	No
124	BLOC1S1	1422614_s_at	17715	-1.145	-0.4077	No
125	CACNA1B	1425812_a_at 1436602_x_at 1439612_at 1460608_at	17852	-1.188	-0.4098	No
126	POU3F4	1422164_at 1422165_at	17853	-1.188	-0.4056	No
127	ROCK2	1423592_at 1451041_at	18027	-1.242	-0.4092	No
128	ARPC4	1423588_at 1423589_at	18037	-1.245	-0.4052	No
129	FOXE3	1422393_at	18229	-1.307	-0.4094	No
130	CHD2	1444246_at 1445843_at	18369	-1.355	-0.4110	No
131	SLC35A2	1422827_x_at 1432533_a_at 1436664_a_at 1439433_a_at 1453858_at 1457024_x_at	18580	-1.440	-0.4156	No
132	SRP54	1430476_at 1441233_at 1441480_at	18744	-1.512	-0.4177	Yes
133	NR2F2	1416158_at 1416159_at 1416160_at 1431237_at 1444229_at	18768	-1.523	-0.4134	Yes
134	FGFRL1	1447878_s_at 1451912_a_at	18812	-1.543	-0.4100	Yes
135	GRK6	1437436_s_at 1450480_a_at 1451672_at	18861	-1.565	-0.4067	Yes
136	KCNK3	1425341_at 1425342_a_at 1426058_a_at	18960	-1.606	-0.4055	Yes
137	SORT1	1423362_at 1423363_at 1450955_s_at	19061	-1.645	-0.4043	Yes
138	MBNL1	1416904_at 1439686_at 1440315_at 1445106_at 1457924_at	19198	-1.703	-0.4046	Yes
139	CITED2	1417129_a_at 1421267_a_at 1439915_at 1440091_at 1443561_at 1443926_at 1445638_at 1446176_at 1447861_x_at 1457632_s_at 1459301_at	19242	-1.728	-0.4005	Yes
140	TGFB1I1	1418136_at	19324	-1.767	-0.3980	Yes
141	ACTB	1419734_at 1436722_a_at 1440365_at AFFX-b-ActinMur/M12481_3_at AFFX-b-ActinMur/M12481_5_at AFFX-b-ActinMur/M12481_M_at	19459	-1.836	-0.3977	Yes
142	ARHGEF17	1419938_s_at 1419939_at 1433682_at 1442357_at 1447441_at	19507	-1.861	-0.3933	Yes
143	EML4	1429612_at 1447838_x_at	19761	-2.043	-0.3977	Yes
144	TAF5L	1448195_at	19865	-2.133	-0.3950	Yes
145	PFN1	1449018_at	19877	-2.140	-0.3879	Yes
146	MCL1	1416880_at 1416881_at 1437527_x_at 1448503_at 1456243_x_at 1456381_x_at	19936	-2.198	-0.3829	Yes
147	CDKN1B	1419497_at 1434045_at	19998	-2.247	-0.3778	Yes
148	ESRRA	1442864_at 1460652_at	20062	-2.306	-0.3725	Yes
149	AGRP	1421690_s_at 1457362_at	20121	-2.357	-0.3669	Yes
150	MYLK	1425504_at 1425505_at 1425506_at	20246	-2.447	-0.3640	Yes
151	DUSP6	1415834_at	20631	-2.865	-0.3716	Yes
152	IER2	1416442_at	20772	-3.058	-0.3672	Yes
153	FOXP1	1421140_a_at 1421141_a_at 1421142_s_at 1435222_at 1438802_at 1443258_at 1446280_at 1447209_at 1455242_at 1456851_at	20879	-3.250	-0.3607	Yes
154	PHF12	1434922_at 1453579_at	20886	-3.262	-0.3495	Yes
155	ACTG2	1422340_a_at	20925	-3.331	-0.3395	Yes
156	ACTA1	1427735_a_at	20946	-3.379	-0.3285	Yes
157	FST	1421365_at 1434458_at	21001	-3.464	-0.3188	Yes
158	RERE	1454670_at	21002	-3.466	-0.3066	Yes
159	VASP	1451097_at	21020	-3.497	-0.2951	Yes
160	MUS81	1431885_a_at 1450432_s_at	21041	-3.543	-0.2835	Yes
161	TAZ	1416207_at 1453785_at	21053	-3.577	-0.2714	Yes
162	RUNDC1	1454829_at	21182	-3.806	-0.2639	Yes
163	FLNA	1426677_at	21187	-3.814	-0.2507	Yes
164	H2AFX	1416746_at	21191	-3.824	-0.2374	Yes
165	NCOA6	1423374_at	21241	-3.923	-0.2258	Yes
166	NR4A1	1416505_at	21376	-4.260	-0.2170	Yes
167	DDX17	1437773_x_at 1439037_at 1452155_a_at	21379	-4.262	-0.2021	Yes
168	CSRP1	1425810_a_at 1425811_a_at	21393	-4.306	-0.1875	Yes
169	DUSP2	1450698_at	21513	-4.754	-0.1762	Yes
170	MAP2K6	1426850_a_at 1459292_at	21619	-5.264	-0.1625	Yes
171	DUSP5	1437199_at	21687	-5.738	-0.1454	Yes
172	STAT5B	1422102_a_at 1422103_a_at	21715	-6.071	-0.1253	Yes
173	JUNB	1415899_at	21777	-6.806	-0.1041	Yes
174	RASSF2	1428392_at 1444889_at	21791	-7.011	-0.0800	Yes
175	EGR1	1417065_at	21803	-7.184	-0.0553	Yes
176	ANXA6	1415818_at 1429246_a_at 1429247_at 1442288_at	21843	-8.231	-0.0281	Yes
177	EGR2	1427682_a_at 1427683_at	21881	-9.155	0.0024	Yes