Details for gene set V$SRF

Table: GSEA Results Summary

Dataset	Set_02_ATM_minus_versus_BT_ATM_minus.phenotype_ATM_minus_versus_BT_ATM_minus.cls #ATM_minus_versus_BT_ATM_minus.phenotype_ATM_minus_versus_BT_ATM_minus.cls #ATM_minus_versus_BT_ATM_minus_repos
Phenotype	phenotype_ATM_minus_versus_BT_ATM_minus.cls#ATM_minus_versus_BT_ATM_minus_repos
Upregulated in class	BT_ATM_minus
GeneSet	V$SRF_C
Enrichment Score (ES)	-0.40149084
Normalized Enrichment Score (NES)	-1.6762065
Nominal p-value	0.0
FDR q-value	0.063330464
FWER p-Value	0.34

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	RSU1	1419259_at	184	5.193	0.0112	No
2	DSTN	1417124_at	526	3.843	0.0101	No
3	TUFT1	1416689_at 1444694_at	560	3.758	0.0228	No
4	RBBP7	1415775_at 1456227_x_at	580	3.697	0.0359	No
5	LCP1	1415983_at 1448160_at	1102	2.896	0.0229	No
6	IGF2AS	1427394_at	1349	2.629	0.0216	No
7	SLC7A1	1421533_at 1454991_at 1454992_at	1360	2.622	0.0310	No
8	FOSB	1422134_at	1438	2.551	0.0371	No
9	CYR61	1416039_x_at 1417848_at 1417849_at 1438133_a_at 1442340_x_at 1457823_at 1459462_at	1600	2.409	0.0388	No
10	NR2F1	1418157_at 1422412_x_at	1693	2.343	0.0435	No
11	CKM	1417614_at	2427	1.926	0.0171	No
12	DEFB129	1440957_at	2430	1.926	0.0243	No
13	ITGA7	1418393_a_at	2586	1.866	0.0242	No
14	ABL1	1423999_at 1441291_at 1444134_at 1445153_at	2937	1.741	0.0147	No
15	SLC2A4	1415958_at 1415959_at	3009	1.719	0.0180	No
16	TANK	1421640_a_at 1441513_at 1459668_at	3295	1.637	0.0111	No
17	GPR20	1440021_at	3751	1.495	-0.0042	No
18	PDLIM4	1417928_at	3965	1.434	-0.0085	No
19	ACTN1	1427385_s_at 1428585_at 1452415_at	4138	1.384	-0.0112	No
20	CNN1	1417917_at	4354	1.326	-0.0161	No
21	ACTR3	1426392_a_at 1434968_a_at 1452051_at	4398	1.316	-0.0131	No
22	STARD13	1452604_at	4689	1.235	-0.0217	No
23	NKX2-2	1421112_at	4695	1.234	-0.0173	No
24	COL1A2	1446326_at 1450857_a_at	4933	1.178	-0.0237	No
25	RAB30	1426452_a_at	5013	1.158	-0.0229	No
26	MYO1B	1427450_x_at 1441210_at 1447364_x_at 1448989_a_at 1448990_a_at 1458007_at 1459679_s_at	5064	1.149	-0.0209	No
27	CFL1	1448346_at 1455138_x_at	5119	1.138	-0.0191	No
28	EMILIN2	1435264_at	5190	1.126	-0.0180	No
29	KCTD15	1435339_at	5251	1.114	-0.0166	No
30	MRVI1	1422245_a_at 1459665_s_at	5319	1.102	-0.0155	No
31	FHL2	1419184_a_at	5551	1.055	-0.0221	No
32	RGS3	1425701_a_at 1427648_at 1449516_a_at 1454026_a_at	5626	1.041	-0.0216	No
33	MYL9	1452670_at	5834	1.004	-0.0273	No
34	GGN	1445278_at	5927	0.987	-0.0278	No
35	HOXB5	1418415_at	5953	0.981	-0.0252	No
36	PLCB3	1448661_at	6320	0.920	-0.0385	No
37	HOXA5	1443803_x_at 1448926_at	6417	0.901	-0.0395	No
38	AKAP12	1419706_a_at 1458235_at	6483	0.887	-0.0392	No
39	SYNCRIP	1422768_at 1422769_at 1426402_at 1428546_at 1450743_s_at	6583	0.870	-0.0404	No
40	PDLIM7	1417959_at 1428319_at 1443785_x_at	6604	0.868	-0.0381	No
41	CTNND1	1422450_at 1437448_s_at 1445830_at	6846	0.826	-0.0460	No
42	ELAVL4	1428741_at 1450258_a_at 1452894_at 1457399_at	7074	0.783	-0.0535	No
43	RHOJ	1418892_at 1444982_at	7280	0.751	-0.0601	No
44	DMPK	1422989_a_at 1434944_at	7439	0.724	-0.0646	No
45	GADD45G	1453851_a_at	7540	0.708	-0.0665	No
46	MYL7	1449071_at	7860	0.656	-0.0787	No
47	TAGLN	1423505_at	7965	0.638	-0.0810	No
48	TPM3	1427260_a_at 1427567_a_at 1436958_x_at 1449996_a_at 1449997_at	8127	0.612	-0.0861	No
49	LPP	1425673_at 1436714_at 1437235_x_at 1438271_at 1440167_s_at 1454899_at 1455314_at	8165	0.606	-0.0855	No
50	PNKP	1416378_at	8287	0.587	-0.0889	No
51	MATR3	1434888_a_at 1438368_a_at 1441272_at 1450874_at 1458508_at	8490	0.556	-0.0960	No
52	CALD1	1424768_at 1424769_s_at 1424770_at 1433146_at 1433147_at 1458057_at	8509	0.553	-0.0948	No
53	AAK1	1420026_at 1435038_s_at 1441782_at	8649	0.527	-0.0992	No
54	LIN28	1437752_at	8700	0.521	-0.0995	No
55	NKX6-2	1427420_at	8772	0.510	-0.1008	No
56	NPAS2	1421036_at 1421037_at	8861	0.493	-0.1030	No
57	EGR4	1449977_at	9046	0.466	-0.1097	No
58	SRF	1418255_s_at 1418256_at	9309	0.428	-0.1201	No
59	RASD2	1427343_at 1427344_s_at 1458433_at	9448	0.407	-0.1249	No
60	MITF	1422025_at 1455214_at	9587	0.387	-0.1298	No
61	MAPK14	1416703_at 1416704_at 1426104_at 1442364_at 1451927_a_at 1459617_at	9589	0.387	-0.1284	No
62	DIXDC1	1425256_a_at 1435207_at 1443957_at 1444395_at	9904	0.337	-0.1415	No
63	ASPA	1418472_at	10057	0.312	-0.1473	No
64	ZFHX1B	1422748_at 1434298_at 1442393_at 1445518_at 1454200_at 1456389_at	10075	0.309	-0.1469	No
65	PLN	1423359_at 1450952_at 1460332_at	10163	0.298	-0.1498	No
66	MYO18B	1431813_at	10339	0.267	-0.1568	No
67	SRD5A2	1422960_at	10355	0.265	-0.1565	No
68	HERC1	1425378_at 1434060_at 1440437_at 1440903_at	10413	0.258	-0.1582	No
69	ITGB6	1422983_at 1432281_a_at	10556	0.236	-0.1638	No
70	OSM	1438767_at	11195	0.139	-0.1926	No
71	ASB2	1428444_at 1436259_at	11660	0.068	-0.2136	No
72	ERBB2IP	1428011_a_at 1439079_a_at 1439080_at 1439638_at 1440573_at	11789	0.047	-0.2193	No
73	JPH2	1421453_at 1455404_at	11899	0.030	-0.2242	No
74	HOXB4	1451761_at 1460379_at	12097	-0.000	-0.2333	No
75	DNAJB4	1431734_a_at 1439524_at 1443611_at 1451177_at	12107	-0.002	-0.2337	No
76	CA3	1430584_s_at 1449434_at 1453588_at 1460256_at	12305	-0.035	-0.2426	No
77	TNNC1	1418370_at	12436	-0.059	-0.2484	No
78	EGR3	1421486_at 1436329_at	12466	-0.064	-0.2495	No
79	DLL1	1419204_at	12503	-0.071	-0.2508	No
80	IL17B	1431693_a_at	12621	-0.093	-0.2559	No
81	PPP2R3A	1455198_a_at	12979	-0.152	-0.2717	No
82	EFHD1	1448507_at	13238	-0.197	-0.2828	No
83	FOSL1	1417487_at 1417488_at	13244	-0.198	-0.2823	No
84	TLE3	1419654_at 1419655_at 1449554_at 1458512_at	13258	-0.200	-0.2821	No
85	KCNMB1	1421400_at 1421401_at	13370	-0.218	-0.2864	No
86	TITF1	1422346_at	13391	-0.221	-0.2865	No
87	AOC3	1449396_at	13412	-0.225	-0.2865	No
88	HOXA3	1427433_s_at 1441070_at 1452421_at	13645	-0.267	-0.2962	No
89	COL8A1	1418440_at 1418441_at 1442794_at 1447819_x_at 1455627_at	13674	-0.272	-0.2964	No
90	SLC25A4	1424562_a_at 1424563_at 1434897_a_at 1455069_x_at	13834	-0.297	-0.3026	No
91	MEIS1	1440431_at 1443260_at 1445773_at 1450992_a_at 1459423_at 1459512_at	14461	-0.412	-0.3298	No
92	ITGB1BP2	1423238_at	14508	-0.421	-0.3304	No
93	DVL3	1420457_at	14636	-0.445	-0.3345	No
94	CNN2	1450981_at	14942	-0.509	-0.3466	No
95	HOXD10	1418606_at	15066	-0.536	-0.3502	No
96	MYH11	1418122_at 1448962_at	15076	-0.538	-0.3486	No
97	SCOC	1416267_at 1430999_a_at	15077	-0.539	-0.3466	No
98	VCL	1416156_at 1416157_at 1445256_at	15322	-0.587	-0.3555	No
99	GFPT2	1418753_at	15357	-0.595	-0.3549	No
100	KRTCAP2	1417058_a_at 1417059_at	15693	-0.671	-0.3677	No
101	MYL6	1435041_at	15833	-0.697	-0.3715	No
102	MRGPRF	1425894_at	15915	-0.718	-0.3725	No
103	TADA3L	1417467_a_at 1448719_at	15996	-0.736	-0.3734	No
104	LMCD1	1424596_s_at	16017	-0.743	-0.3715	No
105	FOS	1423100_at	16185	-0.784	-0.3762	No
106	MAP1A	1460566_at	16197	-0.786	-0.3737	No
107	POPDC2	1417806_at	16448	-0.849	-0.3820	No
108	SPAG7	1433940_at	16573	-0.876	-0.3844	No
109	CFL2	1418066_at 1418067_at 1431432_at	16799	-0.935	-0.3912	No
110	PPP1R12A	1429487_at 1437734_at 1437735_at 1444762_at 1444834_at 1453163_at	16831	-0.943	-0.3890	No
111	TOP1	1423474_at 1438495_at 1457573_at 1459672_at	16915	-0.960	-0.3892	No
112	FOXP2	1422014_at 1438231_at 1438232_at 1440108_at 1441365_at 1458191_at	17028	-0.984	-0.3906	No
113	DMD	1417307_at 1430320_at 1446156_at 1448665_at 1457022_at	17050	-0.989	-0.3878	No
114	RNF39	1440912_at 1441793_at	17085	-0.996	-0.3856	No
115	DUSP10	1417163_at 1417164_at	17100	-1.000	-0.3825	No
116	PRM1	1415955_x_at 1437054_x_at 1439379_x_at	17111	-1.001	-0.3792	No
117	YWHAZ	1416102_at 1416103_at 1436971_x_at 1436981_a_at 1439005_x_at 1443893_at 1448218_s_at 1448219_a_at	17139	-1.007	-0.3766	No
118	ACVR1	1416786_at 1416787_at 1448460_at 1457551_at	17261	-1.031	-0.3782	No
119	MYO1E	1420159_at 1420160_s_at 1428509_at 1449753_at 1449941_at	17288	-1.035	-0.3755	No
120	CRK	1416201_at 1425855_a_at 1436835_at 1448248_at 1460176_at	17587	-1.112	-0.3850	No
121	TRIM46	1460568_at	17684	-1.135	-0.3851	No
122	CDC14A	1436913_at 1443184_at 1446493_at 1459517_at	17694	-1.138	-0.3812	No
123	CACNA1B	1425812_a_at 1436602_x_at 1439612_at 1460608_at	17852	-1.188	-0.3840	No
124	POU3F4	1422164_at 1422165_at	17853	-1.188	-0.3795	No
125	ROCK2	1423592_at 1451041_at	18027	-1.242	-0.3827	No
126	ARPC4	1423588_at 1423589_at	18037	-1.245	-0.3784	No
127	FOXE3	1422393_at	18229	-1.307	-0.3822	No
128	PRKAB2	1435874_at 1435875_at 1442001_at	18564	-1.433	-0.3922	No
129	NR2F2	1416158_at 1416159_at 1416160_at 1431237_at 1444229_at	18768	-1.523	-0.3957	Yes
130	TCF2	1421224_a_at 1441484_at 1451687_a_at	18805	-1.542	-0.3915	Yes
131	FGFRL1	1447878_s_at 1451912_a_at	18812	-1.543	-0.3860	Yes
132	GRK6	1437436_s_at 1450480_a_at 1451672_at	18861	-1.565	-0.3823	Yes
133	LTBP1	1419786_at 1440678_at 1446232_at 1447547_at 1448870_at 1457852_at 1458739_at	18927	-1.594	-0.3792	Yes
134	KCNK3	1425341_at 1425342_a_at 1426058_a_at	18960	-1.606	-0.3746	Yes
135	SSH3	1447929_at	18974	-1.614	-0.3691	Yes
136	ARHGAP1	1424307_at 1451309_at	19191	-1.700	-0.3726	Yes
137	MBNL1	1416904_at 1439686_at 1440315_at 1445106_at 1457924_at	19198	-1.703	-0.3664	Yes
138	DAPK3	1423446_at 1456496_at	19279	-1.747	-0.3635	Yes
139	RRM1	1415878_at 1440073_at 1448127_at	19304	-1.758	-0.3579	Yes
140	TGFB1I1	1418136_at	19324	-1.767	-0.3521	Yes
141	ACTB	1419734_at 1436722_a_at 1440365_at AFFX-b-ActinMur/M12481_3_at AFFX-b-ActinMur/M12481_5_at AFFX-b-ActinMur/M12481_M_at	19459	-1.836	-0.3513	Yes
142	EML4	1429612_at 1447838_x_at	19761	-2.043	-0.3574	Yes
143	PFN1	1449018_at	19877	-2.140	-0.3546	Yes
144	MYLK	1425504_at 1425505_at 1425506_at	20246	-2.447	-0.3623	Yes
145	LDB3	1416752_at 1433783_at 1451999_at	20384	-2.574	-0.3588	Yes
146	CAP1	1417461_at 1417462_at	20417	-2.603	-0.3505	Yes
147	BCAS3	1423528_at 1428454_at 1457817_at 1458557_at	20484	-2.677	-0.3434	Yes
148	DUSP6	1415834_at	20631	-2.865	-0.3392	Yes
149	IER2	1416442_at	20772	-3.058	-0.3341	Yes
150	FOXP1	1421140_a_at 1421141_a_at 1421142_s_at 1435222_at 1438802_at 1443258_at 1446280_at 1447209_at 1455242_at 1456851_at	20879	-3.250	-0.3267	Yes
151	PHF12	1434922_at 1453579_at	20886	-3.262	-0.3146	Yes
152	MCAM	1416357_a_at	20914	-3.303	-0.3033	Yes
153	ACTG2	1422340_a_at	20925	-3.331	-0.2912	Yes
154	ACTA1	1427735_a_at	20946	-3.379	-0.2793	Yes
155	MUS81	1431885_a_at 1450432_s_at	21041	-3.543	-0.2702	Yes
156	TAZ	1416207_at 1453785_at	21053	-3.577	-0.2572	Yes
157	USP52	1426700_a_at	21068	-3.599	-0.2442	Yes
158	RUNDC1	1454829_at	21182	-3.806	-0.2350	Yes
159	FLNA	1426677_at	21187	-3.814	-0.2208	Yes
160	SIPA1	1416206_at	21252	-3.966	-0.2087	Yes
161	UNC84B	1433832_at 1439238_at	21316	-4.110	-0.1961	Yes
162	NR4A1	1416505_at	21376	-4.260	-0.1826	Yes
163	DUSP2	1450698_at	21513	-4.754	-0.1709	Yes
164	DUSP5	1437199_at	21687	-5.738	-0.1571	Yes
165	STAT5B	1422102_a_at 1422103_a_at	21715	-6.071	-0.1354	Yes
166	JUNB	1415899_at	21777	-6.806	-0.1125	Yes
167	RASSF2	1428392_at 1444889_at	21791	-7.011	-0.0865	Yes
168	EGR1	1417065_at	21803	-7.184	-0.0599	Yes
169	ANXA6	1415818_at 1429246_a_at 1429247_at 1442288_at	21843	-8.231	-0.0305	Yes
170	EGR2	1427682_a_at 1427683_at	21881	-9.155	0.0024	Yes