Details for gene set V$NFKB_Q6

Table: GSEA Results Summary

Dataset	Set_02_ATM_minus_versus_BT_ATM_minus.phenotype_ATM_minus_versus_BT_ATM_minus.cls #ATM_minus_versus_BT_ATM_minus.phenotype_ATM_minus_versus_BT_ATM_minus.cls #ATM_minus_versus_BT_ATM_minus_repos
Phenotype	phenotype_ATM_minus_versus_BT_ATM_minus.cls#ATM_minus_versus_BT_ATM_minus_repos
Upregulated in class	BT_ATM_minus
GeneSet	V$NFKB_Q6_01
Enrichment Score (ES)	-0.38448387
Normalized Enrichment Score (NES)	-1.6028925
Nominal p-value	0.0
FDR q-value	0.12230942
FWER p-Value	0.627

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	TRAF4	1416571_at 1460642_at	290	4.584	0.0034	No
2	ARHGAP8	1451463_at	687	3.452	-0.0022	No
3	ENO3	1417951_at 1449631_at	745	3.349	0.0074	No
4	PAPPA	1427633_a_at 1432591_at 1432592_at 1459375_at	760	3.322	0.0189	No
5	COL27A1	1429549_at 1453191_at	788	3.263	0.0295	No
6	ETV1	1422607_at 1445314_at 1450684_at	1054	2.944	0.0281	No
7	PCSK2	1428305_at 1444147_at 1447991_at 1447992_s_at 1448312_at	1652	2.365	0.0093	No
8	PTHLH	1422324_a_at 1427527_a_at	1776	2.281	0.0120	No
9	BMF	1422995_at 1454880_s_at 1458325_x_at	1924	2.173	0.0131	No
10	DGKI	1439986_at 1442813_at	1987	2.136	0.0181	No
11	EDG5	1428176_at 1447880_x_at	2089	2.081	0.0210	No
12	TCEA2	1418107_at 1440791_x_at	2102	2.078	0.0281	No
13	IL2RA	1420691_at 1420692_at	2105	2.077	0.0356	No
14	ELMO1	1424523_at 1446610_at 1450208_a_at	2201	2.025	0.0386	No
15	UBE2D3	1423112_at 1423113_a_at 1423114_at 1450858_a_at 1450859_s_at 1455479_a_at 1455480_s_at	2590	1.864	0.0276	No
16	TGIF	1422286_a_at	2692	1.827	0.0296	No
17	BAZ2B	1435240_at 1440984_at 1441556_at 1442704_at 1442971_at 1445048_at 1448007_at 1458077_at	2733	1.814	0.0344	No
18	ZIC4	1421539_at 1456417_at	2764	1.802	0.0396	No
19	GRK5	1446361_at 1446998_at 1449514_at	2835	1.773	0.0428	No
20	IL13	1420802_at	3078	1.697	0.0379	No
21	XPO6	1422759_a_at 1440492_at 1443737_at	3171	1.672	0.0398	No
22	BLR1	1422003_at	3349	1.621	0.0375	No
23	SEMA3B	1416644_a_at 1431795_a_at 1448415_a_at	3352	1.619	0.0434	No
24	MSC	1418417_at	3487	1.570	0.0429	No
25	SHOX2	1420559_a_at 1438042_at	3505	1.564	0.0479	No
26	IL12A	1425454_a_at	3763	1.492	0.0415	No
27	PCBP4	1433658_x_at 1449054_a_at 1449055_x_at	3818	1.472	0.0444	No
28	ACTN1	1427385_s_at 1428585_at 1452415_at	4138	1.384	0.0348	No
29	IFNB1	1422305_at	4139	1.383	0.0398	No
30	EIF5A	1437859_x_at 1451470_s_at	4180	1.373	0.0430	No
31	UACA	1452985_at	4243	1.354	0.0451	No
32	NEK8	1450337_a_at 1458157_at	4320	1.337	0.0465	No
33	GREM1	1425357_a_at	4352	1.328	0.0499	No
34	MSX1	1417127_at 1448601_s_at	4402	1.315	0.0524	No
35	UPF2	1435030_at 1445777_at	5208	1.123	0.0195	No
36	DCAMKL1	1423125_at 1424270_at 1424271_at 1436659_at 1446190_at 1450863_a_at 1451289_at 1451917_a_at	5227	1.117	0.0228	No
37	NFKBIA	1420088_at 1420089_at 1438157_s_at 1448306_at 1449731_s_at	5266	1.113	0.0251	No
38	SMPD3	1422779_at 1438665_at 1445759_at 1450748_at	5304	1.104	0.0274	No
39	HTR3B	1421652_at	5397	1.087	0.0272	No
40	CNTNAP1	1421580_at	5553	1.054	0.0239	No
41	BAI2	1435558_at	5627	1.041	0.0243	No
42	IGSF4	1417376_a_at 1417377_at 1417378_at 1431611_a_at	5725	1.021	0.0236	No
43	NDRG2	1448154_at	5736	1.020	0.0269	No
44	SP6	1427786_at 1427787_at 1437788_at 1442342_at	5926	0.987	0.0218	No
45	KRTAP13-1	1428007_at	6074	0.960	0.0185	No
46	CSF3	1419427_at	6792	0.833	-0.0114	No
47	PTPRJ	1425587_a_at 1425588_at 1427602_at 1427629_at 1443683_at 1455030_at	6931	0.812	-0.0147	No
48	FGF17	1421523_at 1456239_at	7134	0.773	-0.0212	No
49	GPHN	1426462_at 1426463_at 1430038_at 1444869_at 1445188_at 1458242_at	7272	0.752	-0.0248	No
50	ZNRF1	1420949_at 1420950_at 1424384_a_at	7517	0.713	-0.0334	No
51	EHF	1419474_a_at 1419475_a_at 1447760_x_at 1451375_at	7586	0.701	-0.0339	No
52	IL1RN	1423017_a_at 1425663_at 1451798_at	7646	0.691	-0.0341	No
53	DDR1	1415797_at 1415798_at 1435820_x_at 1437619_x_at 1438367_x_at 1439382_x_at 1456226_x_at 1459990_at	7799	0.667	-0.0387	No
54	BCL3	1418133_at	7849	0.658	-0.0385	No
55	BCL6B	1418421_at	8072	0.619	-0.0465	No
56	TCF1	1421234_at	8178	0.604	-0.0491	No
57	CLCN1	1427591_at 1448082_at	8273	0.588	-0.0513	No
58	MAML2	1446570_at 1447546_s_at	8308	0.584	-0.0507	No
59	TSLP	1450004_at	8467	0.560	-0.0559	No
60	EDN2	1449161_at	8491	0.556	-0.0549	No
61	BMP2K	1421103_at 1437419_at 1458370_at	8630	0.532	-0.0593	No
62	TRIM47	1426784_at	8662	0.526	-0.0588	No
63	RBPSUH	1418114_at 1438848_at 1446436_at 1448957_at 1454896_at	8803	0.505	-0.0634	No
64	FGF1	1423136_at 1441042_at 1450869_at	8923	0.484	-0.0671	No
65	EGF	1418093_a_at	9052	0.465	-0.0713	No
66	PHOX2B	1422232_at 1455907_x_at	9216	0.440	-0.0772	No
67	KLK9	1431681_at	9485	0.401	-0.0880	No
68	SOX5	1423500_a_at 1432189_a_at 1432190_at 1440827_x_at 1446461_at 1452511_at 1459261_at	9520	0.398	-0.0882	No
69	MITF	1422025_at 1455214_at	9587	0.387	-0.0898	No
70	ASCL3	1420780_at	10000	0.322	-0.1075	No
71	TRIB2	1426640_s_at 1426641_at 1459852_x_at	10022	0.318	-0.1073	No
72	UBE2H	1418631_at 1418632_at 1428791_at 1438971_x_at 1447374_at 1459930_at	10362	0.265	-0.1219	No
73	POU2F3	1450507_at	10414	0.258	-0.1233	No
74	EBI3	1449222_at	10539	0.239	-0.1282	No
75	UBD	1419762_at	10602	0.231	-0.1302	No
76	PRKCD	1422847_a_at 1442256_at	10621	0.228	-0.1302	No
77	TP53	1426538_a_at 1427739_a_at 1438808_at 1457623_x_at 1459780_at 1459781_x_at	10770	0.205	-0.1362	No
78	ALG6	1439007_at 1459337_at	11176	0.141	-0.1543	No
79	RALGDS	1460634_at	11301	0.123	-0.1596	No
80	CHD4	1436343_at 1438476_a_at 1451295_a_at	11494	0.095	-0.1680	No
81	MRPS6	1424440_at 1447585_s_at	11517	0.092	-0.1687	No
82	FUT7	1420756_at	11554	0.087	-0.1701	No
83	TBX20	1422219_a_at 1425158_at 1453351_at	11644	0.070	-0.1739	No
84	NFKBIB	1421266_s_at 1446718_at	11779	0.050	-0.1799	No
85	GRIN2D	1421393_at	11881	0.033	-0.1844	No
86	JAK3	1425750_a_at 1446515_at	11975	0.019	-0.1886	No
87	SLC6A12	1449382_at	12058	0.006	-0.1923	No
88	WNT10A	1460657_at	12698	-0.104	-0.2213	No
89	GNB1	1417432_a_at 1425908_at 1454696_at 1459442_at	12974	-0.152	-0.2334	No
90	UBE2I	1422712_a_at 1422713_a_at 1425478_x_at 1453189_at	12987	-0.154	-0.2334	No
91	IL7	1422080_at 1436861_at	13241	-0.197	-0.2443	No
92	TNFRSF1B	1418099_at 1448951_at	13336	-0.213	-0.2478	No
93	SNAP25	1416828_at 1443398_at	13366	-0.217	-0.2484	No
94	RIN2	1426368_at 1441209_at 1442829_at	14116	-0.344	-0.2815	No
95	CENTB5	1439021_at	14406	-0.400	-0.2933	No
96	RASGRP4	1425380_at	14520	-0.423	-0.2970	No
97	DUSP22	1441723_at 1448985_at	14742	-0.468	-0.3054	No
98	DAP3	1450848_at	14776	-0.475	-0.3052	No
99	NFAT5	1426029_a_at 1438999_a_at 1439328_at 1439805_at 1448966_a_at 1451921_a_at 1458213_at	14815	-0.482	-0.3052	No
100	C1QL1	1422777_at	14878	-0.496	-0.3063	No
101	RBMS1	1418703_at 1434005_at 1441437_at 1458578_at 1459968_at	14919	-0.504	-0.3062	No
102	TNFSF7	1449926_at	15069	-0.536	-0.3111	No
103	IL23A	1419529_at	15145	-0.551	-0.3126	No
104	ARHGEF2	1421042_at 1421043_s_at 1427646_a_at	15498	-0.625	-0.3265	No
105	IL4I1	1419192_at	15550	-0.636	-0.3265	No
106	HSD3B7	1416968_a_at 1442912_at	15928	-0.721	-0.3412	No
107	ANKHD1	1419867_a_at 1436597_at 1440754_at 1441597_at 1442641_at 1448008_at 1453023_at 1455759_a_at	15962	-0.730	-0.3400	No
108	SEC61A1	1416189_a_at 1416190_a_at 1416191_at 1434986_a_at 1448242_at 1455987_at	16027	-0.746	-0.3403	No
109	ZBTB11	1454826_at	16111	-0.765	-0.3413	No
110	AMOTL1	1428785_at 1431121_at 1446909_at 1455247_at	16242	-0.797	-0.3443	No
111	MADCAM1	1425253_a_at	16393	-0.836	-0.3482	No
112	RND1	1455197_at	16421	-0.842	-0.3464	No
113	ATP1B1	1418453_a_at 1423890_x_at 1439036_a_at 1451152_a_at 1455949_at	16483	-0.856	-0.3460	No
114	VCAM1	1415989_at 1436003_at 1448162_at 1451314_a_at	16618	-0.890	-0.3489	No
115	CREB1	1421582_a_at 1421583_at 1423402_at 1428755_at 1452529_a_at 1452901_at	16714	-0.917	-0.3500	No
116	RAP2C	1428119_a_at 1437016_x_at 1460430_at	16839	-0.945	-0.3522	No
117	TOP1	1423474_at 1438495_at 1457573_at 1459672_at	16915	-0.960	-0.3522	No
118	NLK	1419112_at 1435970_at 1443279_at 1445427_at 1456467_s_at	17047	-0.988	-0.3546	No
119	NR3C1	1421866_at 1421867_at 1453860_s_at 1457635_s_at 1460303_at	17110	-1.001	-0.3538	No
120	MMP9	1416298_at 1448291_at	17217	-1.023	-0.3549	No
121	RFX5	1423103_at	17346	-1.046	-0.3570	No
122	RHOG	1422572_at	17572	-1.109	-0.3633	No
123	BIRC3	1421392_a_at 1425223_at	17574	-1.109	-0.3593	No
124	BATF	1419410_at	18124	-1.273	-0.3798	Yes
125	SIRT2	1423507_a_at	18151	-1.281	-0.3764	Yes
126	STAT6	1421708_a_at 1426353_at	18205	-1.300	-0.3741	Yes
127	MAG	1460219_at	18242	-1.312	-0.3709	Yes
128	LTA	1420353_at	18361	-1.353	-0.3714	Yes
129	ASH1L	1420985_at 1441117_at 1450071_at 1450072_at	18417	-1.373	-0.3689	Yes
130	SIN3A	1419101_at 1419102_at 1419900_at 1449343_s_at	18534	-1.418	-0.3691	Yes
131	SLAMF8	1425294_at	18573	-1.435	-0.3656	Yes
132	IL27RA	1449508_at	18618	-1.456	-0.3623	Yes
133	CHD6	1427384_at 1431047_at	18677	-1.484	-0.3595	Yes
134	NR2F2	1416158_at 1416159_at 1416160_at 1431237_at 1444229_at	18768	-1.523	-0.3581	Yes
135	CYLD	1429617_at 1429618_at 1445213_at	18770	-1.524	-0.3526	Yes
136	ERN1	1421240_at 1431886_at 1437119_at 1438583_at 1438997_at 1450176_at	18806	-1.542	-0.3486	Yes
137	MOBKL2C	1440919_at 1459919_a_at	18948	-1.601	-0.3492	Yes
138	EP300	1434765_at	18998	-1.622	-0.3456	Yes
139	GATA4	1418863_at 1418864_at 1441364_at	19022	-1.628	-0.3407	Yes
140	PTGES	1439747_at 1449449_at 1449450_at	19079	-1.653	-0.3372	Yes
141	CD69	1428735_at	19336	-1.775	-0.3425	Yes
142	TNFRSF9	1421481_at 1428034_a_at 1460469_at	19759	-2.040	-0.3545	Yes
143	GNG4	1417943_at 1417944_at 1447669_s_at	19838	-2.112	-0.3503	Yes
144	PFN1	1449018_at	19877	-2.140	-0.3443	Yes
145	NTN1	1422987_at 1454974_at	19946	-2.204	-0.3394	Yes
146	IER5	1417612_at 1417613_at	19964	-2.221	-0.3320	Yes
147	IL6ST	1421239_at 1437303_at 1452843_at 1460295_s_at	19966	-2.222	-0.3240	Yes
148	BDNF	1422168_a_at 1422169_a_at	20032	-2.284	-0.3186	Yes
149	MAP4K2	1428297_at 1434833_at 1450244_a_at	20211	-2.423	-0.3180	Yes
150	ICAM1	1424067_at	20213	-2.427	-0.3091	Yes
151	NFKB2	1425902_a_at 1429128_x_at	20604	-2.837	-0.3167	Yes
152	DUSP6	1415834_at	20631	-2.865	-0.3075	Yes
153	SOCS2	1418507_s_at 1438470_at 1441476_at 1442586_at 1446085_at 1449109_at	20642	-2.880	-0.2974	Yes
154	ILK	1449942_a_at	20645	-2.883	-0.2870	Yes
155	MAP3K11	1450669_at	20923	-3.329	-0.2876	Yes
156	AP1S2	1437998_at 1447903_x_at 1452657_at 1456252_x_at 1460036_at	20968	-3.414	-0.2771	Yes
157	USP52	1426700_a_at	21068	-3.599	-0.2685	Yes
158	GADD45B	1420197_at 1449773_s_at 1450971_at	21203	-3.850	-0.2607	Yes
159	RELB	1417856_at	21234	-3.907	-0.2478	Yes
160	UNC84B	1433832_at 1439238_at	21316	-4.110	-0.2365	Yes
161	REV3L	1424632_a_at 1426194_x_at 1451960_a_at	21540	-4.857	-0.2290	Yes
162	TNIP1	1427689_a_at	21579	-5.049	-0.2124	Yes
163	HIVEP1	1422742_at	21677	-5.694	-0.1960	Yes
164	ZBTB9	1429125_at	21729	-6.197	-0.1758	Yes
165	RASSF2	1428392_at 1444889_at	21791	-7.011	-0.1530	Yes
166	SMOC1	1448321_at	21812	-7.366	-0.1270	Yes
167	CCL5	1418126_at	21823	-7.580	-0.0998	Yes
168	LTB	1419135_at	21848	-8.312	-0.0706	Yes
169	FBXL12	1448420_a_at	21903	-9.958	-0.0368	Yes
170	PPP1R13B	1434895_s_at 1442956_at 1459224_at	21924	-10.457	0.0005	Yes