Details for gene set V$E2F

Table: GSEA Results Summary

Dataset	Set_02_ATM_minus_versus_BT_ATM_minus.phenotype_ATM_minus_versus_BT_ATM_minus.cls #ATM_minus_versus_BT_ATM_minus.phenotype_ATM_minus_versus_BT_ATM_minus.cls #ATM_minus_versus_BT_ATM_minus_repos
Phenotype	phenotype_ATM_minus_versus_BT_ATM_minus.cls#ATM_minus_versus_BT_ATM_minus_repos
Upregulated in class	ATM_minus
GeneSet	V$E2F_02
Enrichment Score (ES)	0.29393128
Normalized Enrichment Score (NES)	1.2671459
Nominal p-value	0.06666667
FDR q-value	0.5312736
FWER p-Value	1.0

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	CDC25A	1417131_at 1417132_at 1445995_at	8	9.163	0.0334	Yes
2	MYC	1424942_a_at	90	6.104	0.0522	Yes
3	MCM4	1416214_at 1436708_x_at	124	5.592	0.0713	Yes
4	PRPS1	1416052_at	182	5.217	0.0879	Yes
5	SNRPD1	1416336_s_at	260	4.757	0.1020	Yes
6	ATF5	1425927_a_at	286	4.608	0.1178	Yes
7	MCM6	1416251_at 1438852_x_at 1447756_x_at	351	4.320	0.1308	Yes
8	DNAJC9	1426473_at	463	3.989	0.1404	Yes
9	EZH2	1416544_at 1444263_at	499	3.914	0.1532	Yes
10	RANBP1	1422547_at	561	3.755	0.1643	Yes
11	PHF5A	1424170_at	601	3.640	0.1759	Yes
12	NOLC1	1428869_at 1428870_at 1450087_a_at	790	3.258	0.1793	Yes
13	RQCD1	1450887_at	887	3.121	0.1864	Yes
14	GMNN	1417506_at	930	3.059	0.1958	Yes
15	POLE4	1423371_at 1423372_at 1432286_at 1444739_at	1032	2.964	0.2020	Yes
16	MAP3K7	1419988_at 1425795_a_at 1426627_at 1449693_at 1455441_at 1458787_at	1041	2.954	0.2126	Yes
17	PRPS2	1420637_at 1420638_at 1443418_at 1454843_at	1086	2.908	0.2213	Yes
18	NCL	1415771_at 1415772_at 1415773_at 1442404_at 1456528_x_at	1090	2.905	0.2319	Yes
19	POU4F1	1429667_at 1429668_at	1304	2.669	0.2319	Yes
20	E2F3	1427462_at 1434564_at	1331	2.642	0.2405	Yes
21	AK2	1448450_at 1448451_at	1416	2.576	0.2461	Yes
22	SUMO1	1438289_a_at 1444557_at 1451005_at 1456349_x_at	1706	2.332	0.2414	Yes
23	EIF4A1	1427058_at 1430980_a_at 1434985_a_at	1752	2.297	0.2478	Yes
24	CDCA7	1428069_at 1445681_at	1753	2.296	0.2563	Yes
25	RPS6KA5	1431050_at 1437625_at 1439004_at 1440343_at	1779	2.279	0.2636	Yes
26	FKBP5	1416125_at 1447736_at 1448231_at 1458089_at	1927	2.172	0.2648	Yes
27	GPRC5B	1424613_at 1451411_at	1966	2.150	0.2710	Yes
28	UNG	1425753_a_at	2003	2.129	0.2772	Yes
29	PCNA	1417947_at	2013	2.123	0.2846	Yes
30	PTMA	1423455_at	2198	2.027	0.2836	Yes
31	POLE2	1427094_at 1431440_at	2258	1.996	0.2883	Yes
32	SLC9A5	1420070_a_at 1455760_at	2450	1.920	0.2866	Yes
33	MRPL40	1448849_at	2768	1.800	0.2787	Yes
34	HMGA1	1416184_s_at	2813	1.783	0.2832	Yes
35	ACO2	1436934_s_at 1442102_at 1451002_at	2867	1.764	0.2873	Yes
36	CDC5L	1428092_at 1460429_at	2990	1.723	0.2881	Yes
37	NRK	1436399_s_at 1450078_at 1450079_at	3242	1.651	0.2826	Yes
38	PPIG	1434475_at 1435341_at 1436505_at	3246	1.649	0.2886	Yes
39	POLR2A	1422311_a_at 1426242_at 1458710_at	3378	1.608	0.2885	Yes
40	PHF15	1430081_at 1455345_at	3389	1.604	0.2939	Yes
41	EPHB1	1455188_at	4098	1.396	0.2666	No
42	MCM7	1416030_a_at 1416031_s_at 1438320_s_at	4450	1.300	0.2552	No
43	TOPBP1	1452241_at 1458480_at	4470	1.294	0.2591	No
44	RTBDN	1451603_at 1457331_at	4852	1.197	0.2460	No
45	SFRS7	1424033_at 1424883_s_at 1436871_at	5349	1.096	0.2273	No
46	CSPG2	1421694_a_at 1427256_at 1427257_at 1433043_at 1433044_at 1447586_at 1447887_x_at 1459767_x_at	5354	1.095	0.2312	No
47	ARHGAP6	1417704_a_at 1451867_x_at 1456333_a_at	5616	1.044	0.2230	No
48	MAPK6	1419168_at 1419169_at 1429963_at 1459146_at	5714	1.023	0.2223	No
49	SUV39H1	1427382_a_at 1432227_at 1432236_a_at	5914	0.989	0.2169	No
50	HNRPA2B1	1420365_a_at 1433829_a_at 1433830_at 1434047_x_at	5937	0.985	0.2195	No
51	GRIA4	1421351_at 1435722_at 1436772_at 1440891_at 1443285_at 1458230_at 1460097_at	6236	0.936	0.2092	No
52	MAPT	1417885_at 1424718_at 1424719_a_at 1445634_at 1455028_at	6490	0.886	0.2009	No
53	SYNCRIP	1422768_at 1422769_at 1426402_at 1428546_at 1450743_s_at	6583	0.870	0.1999	No
54	GLRA3	1450239_at	6965	0.804	0.1853	No
55	PRPF4B	1425497_a_at 1425498_at 1436427_at 1451732_at 1451909_a_at 1455696_a_at	7027	0.791	0.1855	No
56	GATA1	1449232_at	7200	0.763	0.1804	No
57	MSH5	1430771_a_at 1449537_at	7307	0.746	0.1783	No
58	CORT	1449820_at	7323	0.743	0.1803	No
59	HCN3	1451023_at	7393	0.732	0.1798	No
60	ATAD2	1436174_at 1443146_at 1443229_at	7710	0.681	0.1678	No
61	SEMA6A	1421414_a_at 1425903_at 1436458_at	7897	0.648	0.1617	No
62	PPM1D	1434142_at 1449092_at 1459069_at	8070	0.619	0.1561	No
63	PAQR4	1423101_at	8486	0.557	0.1391	No
64	PEG3	1417355_at 1417356_at 1433924_at 1447731_at 1447732_x_at	8789	0.508	0.1271	No
65	PLAGL1	1426208_x_at 1438588_at 1450533_a_at	8797	0.506	0.1286	No
66	HTF9C	1434244_x_at 1441920_x_at 1448114_a_at 1448115_at 1453995_a_at 1457620_at	9079	0.461	0.1174	No
67	POLD3	1426838_at 1426839_at 1443733_x_at 1459647_at	9110	0.456	0.1177	No
68	ING3	1422805_a_at 1422806_x_at 1450760_a_at 1460082_at	9296	0.429	0.1108	No
69	NR6A1	1421515_at 1421516_at 1428825_at 1428826_at 1445872_at	9336	0.423	0.1106	No
70	BRMS1L	1452850_s_at 1460443_at	9362	0.420	0.1110	No
71	PIM1	1423006_at 1435458_at	9576	0.389	0.1026	No
72	RET	1421359_at	9772	0.356	0.0950	No
73	GABRB3	1421189_at 1421190_at 1435021_at	9789	0.354	0.0955	No
74	GSPT1	1426736_at 1426737_at 1435000_at 1446550_at 1452168_x_at 1455173_at	10013	0.319	0.0865	No
75	MSH2	1416988_at 1447888_x_at	10427	0.256	0.0685	No
76	FANCD2	1430916_at 1438339_at 1439091_at 1442092_at	10628	0.226	0.0601	No
77	HS6ST3	1421599_at	10807	0.198	0.0527	No
78	PKMYT1	1418481_at 1438601_at	10847	0.193	0.0516	No
79	FMO4	1425799_at 1444852_at	11036	0.165	0.0436	No
80	EED	1448653_at	11336	0.117	0.0303	No
81	PAX6	1419271_at 1425960_s_at 1437816_at 1452526_a_at 1456342_at	11722	0.058	0.0128	No
82	MCM3	1420029_at 1426653_at	11962	0.020	0.0019	No
83	HNRPR	1427129_a_at 1438807_at 1452030_a_at	11969	0.019	0.0017	No
84	RASAL2	1436910_at 1444671_at	12064	0.005	-0.0026	No
85	STAG2	1421849_at 1450396_at	12491	-0.069	-0.0219	No
86	KCNA6	1421568_at 1441049_at 1456954_at	12601	-0.091	-0.0266	No
87	STMN1	1415849_s_at	12732	-0.110	-0.0322	No
88	EFNA5	1421796_a_at 1436866_at 1440052_at 1446383_at 1451930_at	12829	-0.126	-0.0361	No
89	FHOD1	1435557_at	13053	-0.167	-0.0457	No
90	POLD1	1448187_at 1456055_x_at	13226	-0.194	-0.0529	No
91	TLE3	1419654_at 1419655_at 1449554_at 1458512_at	13258	-0.200	-0.0536	No
92	HOXC10	1439798_at	13519	-0.243	-0.0646	No
93	SFRS10	1419543_a_at 1427432_a_at 1441466_at 1446496_at	13554	-0.249	-0.0653	No
94	ASXL2	1439063_at 1444754_at 1453295_at 1458366_at 1460597_at	13609	-0.259	-0.0668	No
95	DNMT1	1422946_a_at 1435122_x_at 1445637_at 1447877_x_at	13764	-0.288	-0.0728	No
96	PCSK1	1421396_at	13776	-0.289	-0.0723	No
97	CCNT1	1419313_at 1456477_at	13808	-0.294	-0.0726	No
98	CLSPN	1441984_at 1456280_at	13879	-0.304	-0.0747	No
99	NASP	1416042_s_at 1416043_at 1440328_at 1442728_at	13952	-0.317	-0.0768	No
100	MCM8	1429557_at	14145	-0.350	-0.0844	No
101	RPS20	1456373_x_at 1456436_x_at	14354	-0.389	-0.0925	No
102	ZIM2	1432297_at	14688	-0.456	-0.1061	No
103	PODN	1435180_at	14754	-0.470	-0.1073	No
104	H2AFV	1428029_a_at 1436596_at	14964	-0.516	-0.1150	No
105	UGCGL1	1432318_at 1448009_at 1455839_at	15043	-0.532	-0.1167	No
106	FBXO5	1429499_at	15067	-0.536	-0.1157	No
107	ARID4A	1436191_at 1438464_at 1456420_at	15208	-0.564	-0.1201	No
108	KBTBD7	1428192_at 1439865_at 1452700_s_at	15211	-0.565	-0.1181	No
109	IL4I1	1419192_at	15550	-0.636	-0.1313	No
110	SOAT1	1417695_a_at 1417696_at 1417697_at 1426818_at 1448068_at	15652	-0.662	-0.1335	No
111	PB1	1426877_a_at 1426878_at 1427266_at 1442603_at	15726	-0.676	-0.1343	No
112	IPO7	1442511_at 1454955_at 1458165_at	15761	-0.683	-0.1334	No
113	ZCCHC8	1423755_at 1441639_at	15828	-0.696	-0.1338	No
114	RRM2	1416120_at 1434437_x_at 1448226_at	15830	-0.697	-0.1313	No
115	ARHGAP11A	1438434_at	15831	-0.697	-0.1287	No
116	FANCC	1442265_at 1447632_at 1450861_at	15949	-0.727	-0.1314	No
117	TYRO3	1425248_a_at 1425249_a_at	16134	-0.772	-0.1370	No
118	ADAMTS2	1435990_at 1455720_at 1457058_at	16567	-0.875	-0.1537	No
119	STAG1	1421939_a_at 1421940_at 1431921_a_at 1434189_at 1435731_x_at 1445145_at 1445652_at 1450420_at	16961	-0.968	-0.1681	No
120	KCNS2	1421342_at 1441211_at 1457325_at	16995	-0.977	-0.1661	No
121	DMD	1417307_at 1430320_at 1446156_at 1448665_at 1457022_at	17050	-0.989	-0.1649	No
122	RAVER1	1427110_at 1427111_s_at 1444966_at	17142	-1.008	-0.1654	No
123	CBX3	1432628_at 1454305_at	17156	-1.010	-0.1622	No
124	SP3	1431804_a_at 1459360_at	17292	-1.035	-0.1646	No
125	SYNGR4	1418875_at	17552	-1.105	-0.1724	No
126	HNRPUL1	1451984_at	17645	-1.127	-0.1725	No
127	RBL1	1424156_at 1425166_at 1432604_at 1454293_at	17693	-1.138	-0.1705	No
128	DNAJC5G	1437814_at	17961	-1.222	-0.1782	No
129	ILF3	1422546_at 1436802_at 1460669_at	17990	-1.232	-0.1750	No
130	AP4M1	1418846_at	18013	-1.238	-0.1714	No
131	USP37	1434242_at 1438212_at	18254	-1.316	-0.1776	No
132	ACBD6	1452601_a_at 1453199_at	18328	-1.341	-0.1760	No
133	HIRA	1436241_s_at 1450049_a_at 1450050_at 1459103_at	18571	-1.435	-0.1818	No
134	E2F1	1417878_at 1431875_a_at 1447840_x_at	18822	-1.547	-0.1876	No
135	MYH10	1441057_at 1452740_at	19115	-1.669	-0.1948	No
136	TMPO	1421237_at 1426020_at 1426349_s_at 1428976_at 1452036_a_at	19131	-1.676	-0.1893	No
137	CASP8AP2	1449217_at	19247	-1.731	-0.1882	No
138	ALDH6A1	1448104_at	19382	-1.793	-0.1878	No
139	AP1S1	1416087_at	19580	-1.906	-0.1898	No
140	FANCG	1420960_at	19730	-2.025	-0.1892	No
141	TBX6	1449868_at	19742	-2.030	-0.1822	No
142	NELL2	1423560_at 1423561_at	19778	-2.057	-0.1762	No
143	TRIM39	1418851_at	19831	-2.106	-0.1708	No
144	PRKDC	1451576_at	20082	-2.318	-0.1738	No
145	MCM2	1434079_s_at 1448777_at	20165	-2.392	-0.1687	No
146	PHC1	1423212_at	20244	-2.447	-0.1633	No
147	SFRS1	1428099_a_at 1428100_at 1430982_at 1434972_x_at 1452430_s_at 1453722_s_at 1457136_at	20262	-2.456	-0.1550	No
148	NUP62	1415925_a_at 1415926_at 1437612_at 1438917_x_at 1447905_x_at 1448150_at	20412	-2.600	-0.1522	No
149	CDC6	1417019_a_at	20444	-2.626	-0.1440	No
150	MAZ	1427099_at	20466	-2.656	-0.1352	No
151	ZBTB4	1429722_at 1460488_at	20541	-2.753	-0.1284	No
152	HNRPD	1425142_a_at 1446083_at	20867	-3.218	-0.1315	No
153	YBX2	1420762_a_at	20895	-3.273	-0.1206	No
154	USP52	1426700_a_at	21068	-3.599	-0.1153	No
155	DCK	1428838_a_at 1439012_a_at 1449176_a_at	21104	-3.673	-0.1033	No
156	BRPF1	1460402_at	21250	-3.958	-0.0954	No
157	MXD3	1422970_at 1438847_at 1448878_at	21492	-4.633	-0.0894	No
158	SLCO3A1	1418030_at 1434537_at 1448918_at	21507	-4.721	-0.0726	No
159	ID3	1416630_at	21571	-5.012	-0.0570	No
160	H2AFZ	1441370_at	21670	-5.645	-0.0407	No
161	E2F7	1437187_at	21748	-6.355	-0.0208	No
162	STK35	1431107_at 1439802_at	21834	-7.937	0.0046	No