Details for gene set V$E2F1

Table: GSEA Results Summary

Dataset	Set_02_ATM_minus_versus_BT_ATM_minus.phenotype_ATM_minus_versus_BT_ATM_minus.cls #ATM_minus_versus_BT_ATM_minus.phenotype_ATM_minus_versus_BT_ATM_minus.cls #ATM_minus_versus_BT_ATM_minus_repos
Phenotype	phenotype_ATM_minus_versus_BT_ATM_minus.cls#ATM_minus_versus_BT_ATM_minus_repos
Upregulated in class	ATM_minus
GeneSet	V$E2F1_Q6
Enrichment Score (ES)	0.28123876
Normalized Enrichment Score (NES)	1.2325164
Nominal p-value	0.078947365
FDR q-value	0.48729965
FWER p-Value	1.0

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	CDC25A	1417131_at 1417132_at 1445995_at	8	9.163	0.0337	Yes
2	MYC	1424942_a_at	90	6.104	0.0527	Yes
3	MCM4	1416214_at 1436708_x_at	124	5.592	0.0720	Yes
4	PRPS1	1416052_at	182	5.217	0.0889	Yes
5	SNRPD1	1416336_s_at	260	4.757	0.1030	Yes
6	ATF5	1425927_a_at	286	4.608	0.1190	Yes
7	MCM6	1416251_at 1438852_x_at 1447756_x_at	351	4.320	0.1322	Yes
8	DNAJC9	1426473_at	463	3.989	0.1419	Yes
9	EZH2	1416544_at 1444263_at	499	3.914	0.1549	Yes
10	RANBP1	1422547_at	561	3.755	0.1661	Yes
11	PHF5A	1424170_at	601	3.640	0.1778	Yes
12	NOLC1	1428869_at 1428870_at 1450087_a_at	790	3.258	0.1813	Yes
13	KPNB1	1416925_at 1434357_a_at 1448526_at 1451967_x_at	885	3.122	0.1886	Yes
14	RQCD1	1450887_at	887	3.121	0.2002	Yes
15	GMNN	1417506_at	930	3.059	0.2097	Yes
16	POLE4	1423371_at 1423372_at 1432286_at 1444739_at	1032	2.964	0.2161	Yes
17	MAP3K7	1419988_at 1425795_a_at 1426627_at 1449693_at 1455441_at 1458787_at	1041	2.954	0.2267	Yes
18	PRPS2	1420637_at 1420638_at 1443418_at 1454843_at	1086	2.908	0.2355	Yes
19	NCL	1415771_at 1415772_at 1415773_at 1442404_at 1456528_x_at	1090	2.905	0.2462	Yes
20	E2F3	1427462_at 1434564_at	1331	2.642	0.2450	Yes
21	AK2	1448450_at 1448451_at	1416	2.576	0.2507	Yes
22	SUMO1	1438289_a_at 1444557_at 1451005_at 1456349_x_at	1706	2.332	0.2461	Yes
23	CDCA7	1428069_at 1445681_at	1753	2.296	0.2526	Yes
24	RPS6KA5	1431050_at 1437625_at 1439004_at 1440343_at	1779	2.279	0.2599	Yes
25	FKBP5	1416125_at 1447736_at 1448231_at 1458089_at	1927	2.172	0.2612	Yes
26	GPRC5B	1424613_at 1451411_at	1966	2.150	0.2675	Yes
27	UNG	1425753_a_at	2003	2.129	0.2737	Yes
28	PCNA	1417947_at	2013	2.123	0.2812	Yes
29	POLE2	1427094_at 1431440_at	2258	1.996	0.2775	No
30	SLC9A5	1420070_a_at 1455760_at	2450	1.920	0.2758	No
31	MRPL40	1448849_at	2768	1.800	0.2680	No
32	HMGA1	1416184_s_at	2813	1.783	0.2726	No
33	ACO2	1436934_s_at 1442102_at 1451002_at	2867	1.764	0.2767	No
34	CDC5L	1428092_at 1460429_at	2990	1.723	0.2775	No
35	NRK	1436399_s_at 1450078_at 1450079_at	3242	1.651	0.2722	No
36	POLR2A	1422311_a_at 1426242_at 1458710_at	3378	1.608	0.2719	No
37	PHF15	1430081_at 1455345_at	3389	1.604	0.2775	No
38	SLC25A3	1416300_a_at 1440302_at	3465	1.579	0.2799	No
39	EPHB1	1455188_at	4098	1.396	0.2561	No
40	MCM7	1416030_a_at 1416031_s_at 1438320_s_at	4450	1.300	0.2448	No
41	TOPBP1	1452241_at 1458480_at	4470	1.294	0.2487	No
42	SFRS7	1424033_at 1424883_s_at 1436871_at	5349	1.096	0.2125	No
43	CSPG2	1421694_a_at 1427256_at 1427257_at 1433043_at 1433044_at 1447586_at 1447887_x_at 1459767_x_at	5354	1.095	0.2164	No
44	ARHGAP6	1417704_a_at 1451867_x_at 1456333_a_at	5616	1.044	0.2083	No
45	SUV39H1	1427382_a_at 1432227_at 1432236_a_at	5914	0.989	0.1983	No
46	HNRPA2B1	1420365_a_at 1433829_a_at 1433830_at 1434047_x_at	5937	0.985	0.2010	No
47	GRIA4	1421351_at 1435722_at 1436772_at 1440891_at 1443285_at 1458230_at 1460097_at	6236	0.936	0.1908	No
48	SYNCRIP	1422768_at 1422769_at 1426402_at 1428546_at 1450743_s_at	6583	0.870	0.1781	No
49	PRPF4B	1425497_a_at 1425498_at 1436427_at 1451732_at 1451909_a_at 1455696_a_at	7027	0.791	0.1607	No
50	GATA1	1449232_at	7200	0.763	0.1556	No
51	MSH5	1430771_a_at 1449537_at	7307	0.746	0.1535	No
52	CORT	1449820_at	7323	0.743	0.1556	No
53	HCN3	1451023_at	7393	0.732	0.1552	No
54	SFRS12	1427134_at 1427135_at 1427136_s_at 1458056_at	7553	0.705	0.1505	No
55	ATAD2	1436174_at 1443146_at 1443229_at	7710	0.681	0.1459	No
56	SEMA6A	1421414_a_at 1425903_at 1436458_at	7897	0.648	0.1397	No
57	PPM1D	1434142_at 1449092_at 1459069_at	8070	0.619	0.1342	No
58	PAQR4	1423101_at	8486	0.557	0.1172	No
59	PVRL1	1438111_at 1438421_at 1440131_at 1446488_at 1450819_at	8576	0.541	0.1151	No
60	RBBP4	1434892_x_at 1442443_at 1454791_a_at 1454875_a_at 1456260_at	8828	0.501	0.1054	No
61	CTNND2	1422592_at 1438891_at 1443638_at 1445114_at 1447552_s_at 1456116_at	8862	0.493	0.1057	No
62	HTF9C	1434244_x_at 1441920_x_at 1448114_a_at 1448115_at 1453995_a_at 1457620_at	9079	0.461	0.0975	No
63	POLD3	1426838_at 1426839_at 1443733_x_at 1459647_at	9110	0.456	0.0979	No
64	ING3	1422805_a_at 1422806_x_at 1450760_a_at 1460082_at	9296	0.429	0.0910	No
65	BRMS1L	1452850_s_at 1460443_at	9362	0.420	0.0895	No
66	SALL1	1450489_at	9429	0.410	0.0880	No
67	PIM1	1423006_at 1435458_at	9576	0.389	0.0828	No
68	GABRB3	1421189_at 1421190_at 1435021_at	9789	0.354	0.0744	No
69	GSPT1	1426736_at 1426737_at 1435000_at 1446550_at 1452168_x_at 1455173_at	10013	0.319	0.0653	No
70	SSBP3	1425940_a_at 1427917_s_at 1439136_at 1443554_at 1457560_at 1458749_at	10336	0.268	0.0515	No
71	MSH2	1416988_at 1447888_x_at	10427	0.256	0.0483	No
72	FANCD2	1430916_at 1438339_at 1439091_at 1442092_at	10628	0.226	0.0400	No
73	HS6ST3	1421599_at	10807	0.198	0.0325	No
74	PKMYT1	1418481_at 1438601_at	10847	0.193	0.0315	No
75	FMO4	1425799_at 1444852_at	11036	0.165	0.0234	No
76	CACNA1G	1423365_at	11207	0.137	0.0162	No
77	EED	1448653_at	11336	0.117	0.0107	No
78	PAX6	1419271_at 1425960_s_at 1437816_at 1452526_a_at 1456342_at	11722	0.058	-0.0068	No
79	ERBB2IP	1428011_a_at 1439079_a_at 1439080_at 1439638_at 1440573_at	11789	0.047	-0.0096	No
80	MCM3	1420029_at 1426653_at	11962	0.020	-0.0174	No
81	HNRPR	1427129_a_at 1438807_at 1452030_a_at	11969	0.019	-0.0176	No
82	RASAL2	1436910_at 1444671_at	12064	0.005	-0.0219	No
83	STAG2	1421849_at 1450396_at	12491	-0.069	-0.0412	No
84	KCNA6	1421568_at 1441049_at 1456954_at	12601	-0.091	-0.0459	No
85	STMN1	1415849_s_at	12732	-0.110	-0.0515	No
86	EFNA5	1421796_a_at 1436866_at 1440052_at 1446383_at 1451930_at	12829	-0.126	-0.0554	No
87	FHOD1	1435557_at	13053	-0.167	-0.0650	No
88	POLD1	1448187_at 1456055_x_at	13226	-0.194	-0.0722	No
89	HOXC10	1439798_at	13519	-0.243	-0.0847	No
90	SFRS10	1419543_a_at 1427432_a_at 1441466_at 1446496_at	13554	-0.249	-0.0854	No
91	ASXL2	1439063_at 1444754_at 1453295_at 1458366_at 1460597_at	13609	-0.259	-0.0869	No
92	ATE1	1420036_at 1420651_at 1420652_at 1435173_at 1446611_at 1449709_s_at	13675	-0.272	-0.0888	No
93	DNMT1	1422946_a_at 1435122_x_at 1445637_at 1447877_x_at	13764	-0.288	-0.0918	No
94	PCSK1	1421396_at	13776	-0.289	-0.0912	No
95	CCNT1	1419313_at 1456477_at	13808	-0.294	-0.0916	No
96	CLSPN	1441984_at 1456280_at	13879	-0.304	-0.0937	No
97	NASP	1416042_s_at 1416043_at 1440328_at 1442728_at	13952	-0.317	-0.0958	No
98	MCM8	1429557_at	14145	-0.350	-0.1033	No
99	RPS20	1456373_x_at 1456436_x_at	14354	-0.389	-0.1114	No
100	KLF5	1430255_at 1451021_a_at 1451739_at	14489	-0.417	-0.1160	No
101	PODN	1435180_at	14754	-0.470	-0.1264	No
102	H2AFV	1428029_a_at 1436596_at	14964	-0.516	-0.1341	No
103	UGCGL1	1432318_at 1448009_at 1455839_at	15043	-0.532	-0.1357	No
104	FBXO5	1429499_at	15067	-0.536	-0.1347	No
105	ARID4A	1436191_at 1438464_at 1456420_at	15208	-0.564	-0.1391	No
106	KBTBD7	1428192_at 1439865_at 1452700_s_at	15211	-0.565	-0.1370	No
107	CTCF	1418330_at 1449042_at	15489	-0.623	-0.1474	No
108	IL4I1	1419192_at	15550	-0.636	-0.1478	No
109	SOAT1	1417695_a_at 1417696_at 1417697_at 1426818_at 1448068_at	15652	-0.662	-0.1500	No
110	PB1	1426877_a_at 1426878_at 1427266_at 1442603_at	15726	-0.676	-0.1508	No
111	IPO7	1442511_at 1454955_at 1458165_at	15761	-0.683	-0.1499	No
112	ZCCHC8	1423755_at 1441639_at	15828	-0.696	-0.1503	No
113	RRM2	1416120_at 1434437_x_at 1448226_at	15830	-0.697	-0.1478	No
114	ARHGAP11A	1438434_at	15831	-0.697	-0.1452	No
115	FANCC	1442265_at 1447632_at 1450861_at	15949	-0.727	-0.1478	No
116	TYRO3	1425248_a_at 1425249_a_at	16134	-0.772	-0.1534	No
117	ADAMTS2	1435990_at 1455720_at 1457058_at	16567	-0.875	-0.1700	No
118	STAG1	1421939_a_at 1421940_at 1431921_a_at 1434189_at 1435731_x_at 1445145_at 1445652_at 1450420_at	16961	-0.968	-0.1844	No
119	KCNS2	1421342_at 1441211_at 1457325_at	16995	-0.977	-0.1823	No
120	DMD	1417307_at 1430320_at 1446156_at 1448665_at 1457022_at	17050	-0.989	-0.1811	No
121	RAVER1	1427110_at 1427111_s_at 1444966_at	17142	-1.008	-0.1815	No
122	CBX3	1432628_at 1454305_at	17156	-1.010	-0.1784	No
123	SP3	1431804_a_at 1459360_at	17292	-1.035	-0.1807	No
124	ORC1L	1422663_at 1443172_at	17521	-1.096	-0.1871	No
125	SYNGR4	1418875_at	17552	-1.105	-0.1844	No
126	HNRPUL1	1451984_at	17645	-1.127	-0.1844	No
127	RBL1	1424156_at 1425166_at 1432604_at 1454293_at	17693	-1.138	-0.1823	No
128	DNAJC5G	1437814_at	17961	-1.222	-0.1900	No
129	ILF3	1422546_at 1436802_at 1460669_at	17990	-1.232	-0.1867	No
130	AP4M1	1418846_at	18013	-1.238	-0.1832	No
131	USP37	1434242_at 1438212_at	18254	-1.316	-0.1893	No
132	ACBD6	1452601_a_at 1453199_at	18328	-1.341	-0.1876	No
133	FLI1	1422024_at 1433512_at 1441584_at	18391	-1.366	-0.1854	No
134	HIRA	1436241_s_at 1450049_a_at 1450050_at 1459103_at	18571	-1.435	-0.1883	No
135	E2F1	1417878_at 1431875_a_at 1447840_x_at	18822	-1.547	-0.1940	No
136	MYH10	1441057_at 1452740_at	19115	-1.669	-0.2012	No
137	TMPO	1421237_at 1426020_at 1426349_s_at 1428976_at 1452036_a_at	19131	-1.676	-0.1957	No
138	CASP8AP2	1449217_at	19247	-1.731	-0.1945	No
139	CDT1	1424143_a_at 1424144_at 1455791_at	19381	-1.792	-0.1939	No
140	ALDH6A1	1448104_at	19382	-1.793	-0.1873	No
141	AP1S1	1416087_at	19580	-1.906	-0.1892	No
142	FANCG	1420960_at	19730	-2.025	-0.1885	No
143	TBX6	1449868_at	19742	-2.030	-0.1815	No
144	NELL2	1423560_at 1423561_at	19778	-2.057	-0.1754	No
145	PRKDC	1451576_at	20082	-2.318	-0.1807	No
146	MCM2	1434079_s_at 1448777_at	20165	-2.392	-0.1756	No
147	PHC1	1423212_at	20244	-2.447	-0.1700	No
148	SFRS1	1428099_a_at 1428100_at 1430982_at 1434972_x_at 1452430_s_at 1453722_s_at 1457136_at	20262	-2.456	-0.1617	No
149	NUP62	1415925_a_at 1415926_at 1437612_at 1438917_x_at 1447905_x_at 1448150_at	20412	-2.600	-0.1588	No
150	CDC6	1417019_a_at	20444	-2.626	-0.1505	No
151	MAZ	1427099_at	20466	-2.656	-0.1416	No
152	ZBTB4	1429722_at 1460488_at	20541	-2.753	-0.1347	No
153	HNRPD	1425142_a_at 1446083_at	20867	-3.218	-0.1377	No
154	YBX2	1420762_a_at	20895	-3.273	-0.1267	No
155	USP52	1426700_a_at	21068	-3.599	-0.1212	No
156	DCK	1428838_a_at 1439012_a_at 1449176_a_at	21104	-3.673	-0.1091	No
157	MXD3	1422970_at 1438847_at 1448878_at	21492	-4.633	-0.1097	No
158	SLCO3A1	1418030_at 1434537_at 1448918_at	21507	-4.721	-0.0927	No
159	ID3	1416630_at	21571	-5.012	-0.0770	No
160	PHF13	1455175_at	21597	-5.168	-0.0589	No
161	H2AFZ	1441370_at	21670	-5.645	-0.0412	No
162	E2F7	1437187_at	21748	-6.355	-0.0211	No
163	STK35	1431107_at 1439802_at	21834	-7.937	0.0046	No