Dataset | Set_01_ATM_minus_versus_SCID.phenotype_ATM_minus_versus_SCID.cls #ATM_minus_versus_SCID |
Phenotype | phenotype_ATM_minus_versus_SCID.cls#ATM_minus_versus_SCID |
Upregulated in class | SCID |
GeneSet | CYTOSKELETAL_PROTEIN_BINDING |
Enrichment Score (ES) | -0.3886001 |
Normalized Enrichment Score (NES) | -1.5734658 |
Nominal p-value | 0.0026385225 |
FDR q-value | 1.0 |
FWER p-Value | 1.0 |
PROBE | DESCRIPTION (from dataset) | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
---|---|---|---|---|---|---|---|---|
1 | KATNA1 | 1450949_at | 210 | 3.764 | 0.0184 | No | ||
2 | LRPPRC | 1424353_at | 294 | 3.288 | 0.0391 | No | ||
3 | TNNI3 | 1422536_at | 570 | 2.668 | 0.0464 | No | ||
4 | UNC84B | 1433832_at 1439238_at | 664 | 2.452 | 0.0605 | No | ||
5 | ABI1 | 1423177_a_at 1423178_at 1450890_a_at | 1206 | 1.799 | 0.0490 | No | ||
6 | TUBGCP5 | 1426518_at 1439923_at 1439924_x_at 1457282_x_at | 1306 | 1.734 | 0.0574 | No | ||
7 | RAB11FIP5 | 1427405_s_at 1434314_s_at | 1377 | 1.697 | 0.0669 | No | ||
8 | ANLN | 1433543_at 1439648_at | 1418 | 1.676 | 0.0776 | No | ||
9 | ABI2 | 1433985_at 1436984_at 1444783_at 1458053_at 1460153_at | 1536 | 1.609 | 0.0842 | No | ||
10 | KIF5B | 1418427_at 1418428_at 1418429_at 1418430_at 1418431_at | 1645 | 1.536 | 0.0907 | No | ||
11 | ADD2 | 1421975_a_at 1435287_at 1451914_a_at | 1738 | 1.485 | 0.0975 | No | ||
12 | APOE | 1432466_a_at | 1886 | 1.413 | 0.1013 | No | ||
13 | ARL8B | 1418819_at 1428137_at 1428138_s_at | 2340 | 1.211 | 0.0896 | No | ||
14 | SSH2 | 1456153_at | 2498 | 1.155 | 0.0910 | No | ||
15 | TARDBP | 1423723_s_at 1428467_at 1434419_s_at 1436318_at 1455655_a_at | 2662 | 1.111 | 0.0918 | No | ||
16 | SVIL | 1427662_at 1460694_s_at 1460735_at | 2913 | 1.043 | 0.0881 | No | ||
17 | SYNE1 | 1421545_a_at 1455225_at 1455493_at | 3084 | 1.006 | 0.0878 | No | ||
18 | MAPRE1 | 1422764_at 1422765_at 1428819_at 1428820_at 1450740_a_at | 3155 | 0.995 | 0.0920 | No | ||
19 | JUP | 1426873_s_at | 3447 | 0.932 | 0.0856 | No | ||
20 | VAPB | 1423152_at 1436079_s_at 1445370_at 1458501_at | 3726 | 0.872 | 0.0794 | No | ||
21 | MAP1S | 1454732_at | 3817 | 0.855 | 0.0816 | No | ||
22 | TNNT2 | 1418726_a_at 1424967_x_at 1440424_at | 3843 | 0.850 | 0.0868 | No | ||
23 | ACTN1 | 1427385_s_at 1428585_at 1452415_at | 4204 | 0.783 | 0.0761 | No | ||
24 | MAPK8IP3 | 1416437_a_at 1425975_a_at 1436676_at 1460628_at | 4327 | 0.761 | 0.0762 | No | ||
25 | BRCA2 | 1419076_a_at | 4532 | 0.720 | 0.0722 | No | ||
26 | KIF1B | 1423994_at 1423995_at 1425270_at 1451200_at 1451642_at 1451762_a_at 1455182_at 1458426_at | 4559 | 0.716 | 0.0764 | No | ||
27 | BAIAP2 | 1425656_a_at 1435128_at 1451027_at 1451028_at | 4795 | 0.675 | 0.0706 | No | ||
28 | CCR5 | 1422259_a_at 1422260_x_at 1424727_at | 5137 | 0.617 | 0.0596 | No | ||
29 | CAPZB | 1417259_a_at 1424168_a_at 1431668_at 1453960_a_at | 5163 | 0.613 | 0.0630 | No | ||
30 | MARCKS | 1415971_at 1415972_at 1430311_at 1437034_x_at 1456028_x_at | 5259 | 0.599 | 0.0631 | No | ||
31 | ARPC4 | 1423588_at 1423589_at | 5564 | 0.556 | 0.0533 | No | ||
32 | ACTN2 | 1448327_at 1456968_at | 6106 | 0.487 | 0.0321 | No | ||
33 | ANK1 | 1419421_at 1425677_a_at 1443291_at 1450627_at 1452512_a_at | 6503 | 0.441 | 0.0173 | No | ||
34 | CYFIP1 | 1416329_at 1445327_at 1457134_at 1457615_at | 6979 | 0.389 | -0.0016 | No | ||
35 | TRIM63 | 1438704_at | 7076 | 0.378 | -0.0032 | No | ||
36 | HOOK3 | 1443857_at 1446737_a_at | 7101 | 0.375 | -0.0015 | No | ||
37 | MARK4 | 1439051_a_at 1456618_at | 7566 | 0.325 | -0.0204 | No | ||
38 | S100B | 1419383_at 1434342_at | 7747 | 0.309 | -0.0263 | No | ||
39 | GABARAPL2 | 1423187_at 1441376_at 1444956_at 1459477_at | 8101 | 0.276 | -0.0405 | No | ||
40 | UXT | 1418986_a_at | 8224 | 0.264 | -0.0441 | No | ||
41 | TNNT1 | 1419606_a_at | 8250 | 0.261 | -0.0433 | No | ||
42 | CDK5RAP2 | 1443976_at 1447103_at 1452618_at | 8514 | 0.233 | -0.0536 | No | ||
43 | RACGAP1 | 1421546_a_at 1441889_x_at 1451358_a_at | 9255 | 0.166 | -0.0863 | No | ||
44 | DCX | 1418139_at 1418140_at 1418141_at 1448974_at | 10061 | 0.097 | -0.1225 | No | ||
45 | BIRC5 | 1424278_a_at | 10251 | 0.082 | -0.1306 | No | ||
46 | RHCG | 1417362_at | 10331 | 0.074 | -0.1337 | No | ||
47 | TNNC1 | 1418370_at | 10674 | 0.046 | -0.1490 | No | ||
48 | MAPK8IP2 | 1418785_at 1418786_at 1435045_s_at 1449225_a_at 1455194_at | 10714 | 0.043 | -0.1505 | No | ||
49 | SORBS2 | 1437197_at 1441624_at 1446744_at | 10951 | 0.022 | -0.1611 | No | ||
50 | MAPK8IP1 | 1425679_a_at 1440619_at | 11065 | 0.011 | -0.1662 | No | ||
51 | APC | 1420956_at 1420957_at 1435543_at 1450056_at | 11193 | 0.000 | -0.1720 | No | ||
52 | STMN1 | 1415849_s_at | 11332 | -0.013 | -0.1783 | No | ||
53 | SCIN | 1450276_a_at | 11967 | -0.069 | -0.2068 | No | ||
54 | DYNC1I1 | 1416361_a_at | 12130 | -0.084 | -0.2137 | No | ||
55 | IQGAP2 | 1433885_at 1459894_at | 12249 | -0.093 | -0.2184 | No | ||
56 | PKD2L1 | 1457105_at | 12266 | -0.095 | -0.2184 | No | ||
57 | ARPC1A | 1416079_a_at | 12302 | -0.098 | -0.2193 | No | ||
58 | ABRA | 1458455_at | 12506 | -0.118 | -0.2277 | No | ||
59 | RHAG | 1419014_at | 12605 | -0.126 | -0.2313 | No | ||
60 | SSH1 | 1433874_at 1438253_at 1439237_a_at 1455854_a_at | 12614 | -0.126 | -0.2307 | No | ||
61 | LIMA1 | 1422499_at 1425654_a_at 1435726_at 1435727_s_at 1450629_at | 12670 | -0.132 | -0.2322 | No | ||
62 | CXCR4 | 1448710_at | 12847 | -0.149 | -0.2392 | No | ||
63 | CGN | 1430329_at 1435155_at | 13080 | -0.171 | -0.2486 | No | ||
64 | NDE1 | 1435737_a_at | 13130 | -0.176 | -0.2495 | No | ||
65 | MYO6 | 1421120_at 1433942_at 1435559_at | 13174 | -0.179 | -0.2501 | No | ||
66 | TMOD2 | 1430153_at 1431326_a_at 1435060_at 1437167_at 1439223_at 1451301_at | 13204 | -0.182 | -0.2501 | No | ||
67 | COTL1 | 1416001_a_at 1416002_x_at 1425801_x_at 1436236_x_at 1436838_x_at 1437811_x_at | 13355 | -0.196 | -0.2555 | No | ||
68 | CALD1 | 1424768_at 1424769_s_at 1424770_at 1433146_at 1433147_at 1458057_at | 13541 | -0.212 | -0.2624 | No | ||
69 | CENPJ | 1423140_at 1423141_at 1437643_at 1450872_s_at | 13687 | -0.224 | -0.2674 | No | ||
70 | ADD1 | 1420953_at 1420954_a_at 1439125_at 1450054_at | 13698 | -0.225 | -0.2662 | No | ||
71 | MYBPC3 | 1418551_at | 13902 | -0.246 | -0.2737 | No | ||
72 | ESPN | 1423005_a_at 1458260_at | 13945 | -0.250 | -0.2737 | No | ||
73 | HPCA | 1425833_a_at 1450930_at | 14074 | -0.263 | -0.2776 | No | ||
74 | PACSIN3 | 1416995_at 1431534_at 1437834_s_at 1456191_x_at | 14229 | -0.279 | -0.2826 | No | ||
75 | MEFV | 1460283_at | 14476 | -0.304 | -0.2916 | No | ||
76 | NRAP | 1421253_at | 14481 | -0.305 | -0.2895 | No | ||
77 | SORBS3 | 1419329_at | 14619 | -0.320 | -0.2934 | No | ||
78 | MYH10 | 1441057_at 1452740_at | 14739 | -0.333 | -0.2964 | No | ||
79 | DLG1 | 1415691_at 1445798_at 1450768_at 1459635_at | 15106 | -0.374 | -0.3104 | No | ||
80 | GC | 1426547_at | 15411 | -0.407 | -0.3213 | No | ||
81 | MYLIP | 1424988_at | 15981 | -0.476 | -0.3439 | No | ||
82 | SHROOM3 | 1422629_s_at 1432377_x_at 1442952_at 1445401_at 1451854_a_at 1453714_a_at 1454211_a_at | 16124 | -0.495 | -0.3467 | No | ||
83 | MAPT | 1417885_at 1424718_at 1424719_a_at 1445634_at 1455028_at | 16347 | -0.525 | -0.3530 | No | ||
84 | FLNA | 1426677_at | 16411 | -0.532 | -0.3519 | No | ||
85 | ABLIM1 | 1442376_at 1453103_at 1454708_at 1460120_at | 16416 | -0.533 | -0.3481 | No | ||
86 | MYOZ1 | 1448636_at 1460202_at | 16464 | -0.540 | -0.3462 | No | ||
87 | SPTBN4 | 1425116_a_at | 16669 | -0.573 | -0.3513 | No | ||
88 | CLASP1 | 1427353_at 1452265_at 1459233_at 1460102_at | 16777 | -0.586 | -0.3518 | No | ||
89 | TTN | 1427445_a_at 1427446_s_at 1431928_at 1444083_at 1444638_at 1446450_at | 16786 | -0.588 | -0.3478 | No | ||
90 | KPTN | 1423438_at 1440025_at | 16837 | -0.596 | -0.3457 | No | ||
91 | RPH3AL | 1431695_at | 16988 | -0.618 | -0.3479 | No | ||
92 | MYO9B | 1418031_at 1438533_at 1459110_at | 17055 | -0.629 | -0.3463 | No | ||
93 | PALLD | 1427228_at 1433768_at 1440635_at 1440693_at | 17558 | -0.714 | -0.3640 | No | ||
94 | CNN2 | 1450981_at | 17663 | -0.733 | -0.3633 | No | ||
95 | PARVG | 1416875_at 1416876_at | 18008 | -0.801 | -0.3731 | No | ||
96 | ATG4C | 1434014_at 1441440_at | 18347 | -0.884 | -0.3820 | Yes | ||
97 | SYNPO | 1427045_at 1434089_at | 18358 | -0.887 | -0.3758 | Yes | ||
98 | NEXN | 1435649_at 1446084_at | 18392 | -0.897 | -0.3707 | Yes | ||
99 | ARL8A | 1424640_at | 18477 | -0.914 | -0.3677 | Yes | ||
100 | DST | 1421117_at 1421276_a_at 1423626_at 1442395_at 1446943_at 1450119_at 1458075_at 1459098_at 1459356_at | 18573 | -0.938 | -0.3651 | Yes | ||
101 | CLASP2 | 1424836_a_at 1427328_a_at 1429976_at 1440802_at 1441726_at 1443320_at 1456911_at | 18697 | -0.965 | -0.3635 | Yes | ||
102 | MTSS1 | 1424826_s_at 1434036_at 1440847_at 1443729_at 1446284_at 1451496_at | 18827 | -0.989 | -0.3621 | Yes | ||
103 | IPP | 1421771_a_at | 18906 | -1.002 | -0.3582 | Yes | ||
104 | CTNNA1 | 1437275_at 1437807_x_at 1443662_at 1448149_at | 18949 | -1.008 | -0.3526 | Yes | ||
105 | PKD2 | 1417753_at 1441870_s_at | 18989 | -1.014 | -0.3468 | Yes | ||
106 | DMD | 1417307_at 1430320_at 1446156_at 1448665_at 1457022_at | 19004 | -1.017 | -0.3399 | Yes | ||
107 | RAE1 | 1429528_at 1444256_at 1459822_at | 19269 | -1.070 | -0.3440 | Yes | ||
108 | ACTA1 | 1427735_a_at | 19349 | -1.094 | -0.3395 | Yes | ||
109 | NCALD | 1417568_at 1417569_at 1439730_at 1444466_at 1458037_at | 19350 | -1.094 | -0.3313 | Yes | ||
110 | TLN1 | 1436042_at 1448402_at 1457782_at | 19377 | -1.100 | -0.3243 | Yes | ||
111 | EGFR | 1424932_at 1432647_at 1435888_at 1451530_at 1454313_at 1457563_at 1460420_a_at | 19516 | -1.141 | -0.3221 | Yes | ||
112 | ARHGEF2 | 1421042_at 1421043_s_at 1427646_a_at | 19528 | -1.143 | -0.3141 | Yes | ||
113 | WASF2 | 1438683_at | 19578 | -1.156 | -0.3077 | Yes | ||
114 | SORBS1 | 1417358_s_at 1425826_a_at 1428471_at 1436737_a_at 1440311_at 1442401_at 1443983_at 1455967_at | 20007 | -1.320 | -0.3175 | Yes | ||
115 | CROCC | 1427338_at | 20064 | -1.352 | -0.3100 | Yes | ||
116 | PRNP | 1416130_at 1446507_at 1448233_at | 20206 | -1.410 | -0.3059 | Yes | ||
117 | DBNL | 1460334_at | 20258 | -1.438 | -0.2976 | Yes | ||
118 | LSP1 | 1417756_a_at | 20291 | -1.457 | -0.2882 | Yes | ||
119 | TUBGCP3 | 1426707_at | 20414 | -1.519 | -0.2824 | Yes | ||
120 | RABGAP1 | 1424188_at 1441217_at 1441800_at 1443535_at 1457370_at 1460486_at | 20460 | -1.540 | -0.2730 | Yes | ||
121 | ARFGEF1 | 1415711_at 1437104_at 1444175_at 1456917_at | 20566 | -1.608 | -0.2658 | Yes | ||
122 | TMOD4 | 1449969_at | 20637 | -1.650 | -0.2567 | Yes | ||
123 | POLB | 1425371_at 1434229_a_at | 20649 | -1.657 | -0.2449 | Yes | ||
124 | CAPZA1 | 1439455_x_at 1440380_at | 20744 | -1.719 | -0.2364 | Yes | ||
125 | CDC42EP3 | 1422642_at 1450700_at | 21192 | -2.052 | -0.2416 | Yes | ||
126 | TMOD3 | 1423088_at 1423089_at 1438556_a_at 1439626_at 1455708_at 1456913_at | 21205 | -2.063 | -0.2267 | Yes | ||
127 | GABARAPL1 | 1416418_at 1416419_s_at 1442572_at | 21332 | -2.220 | -0.2160 | Yes | ||
128 | FXYD5 | 1418296_at | 21361 | -2.252 | -0.2005 | Yes | ||
129 | ACTN4 | 1423449_a_at 1444258_at | 21404 | -2.336 | -0.1850 | Yes | ||
130 | PXN | 1424027_at 1426085_a_at 1456135_s_at | 21435 | -2.375 | -0.1686 | Yes | ||
131 | GABARAP | 1416937_at | 21559 | -2.536 | -0.1554 | Yes | ||
132 | MYH9 | 1417472_at 1420170_at 1420171_s_at 1420172_at 1440708_at | 21598 | -2.642 | -0.1374 | Yes | ||
133 | TUBGCP6 | 1435090_at | 21614 | -2.678 | -0.1181 | Yes | ||
134 | ATG4D | 1433918_at 1439130_at | 21632 | -2.725 | -0.0986 | Yes | ||
135 | SMTN | 1452469_a_at | 21860 | -4.679 | -0.0741 | Yes | ||
136 | PDLIM5 | 1429783_at 1438186_at 1442710_at 1446339_at | 21872 | -5.168 | -0.0361 | Yes | ||
137 | VCL | 1416156_at 1416157_at 1445256_at | 21875 | -5.223 | 0.0028 | Yes |