Details for gene set V$SP3

Table: GSEA Results Summary

Dataset	Set_01_ATM_minus_versus_SCID.phenotype_ATM_minus_versus_SCID.cls #ATM_minus_versus_SCID
Phenotype	phenotype_ATM_minus_versus_SCID.cls#ATM_minus_versus_SCID
Upregulated in class	SCID
GeneSet	V$SP3_Q3
Enrichment Score (ES)	-0.36926147
Normalized Enrichment Score (NES)	-1.5558263
Nominal p-value	0.0
FDR q-value	0.6643652
FWER p-Value	0.648

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	XRN2	1422842_at 1450777_at	39	7.638	0.0420	No
2	UBE2R2	1415768_a_at 1443742_x_at 1444460_at	269	3.402	0.0510	No
3	BCL3	1418133_at	395	3.038	0.0627	No
4	WBP5	1451230_a_at	680	2.422	0.0636	No
5	PLTP	1417963_at 1456424_s_at	746	2.317	0.0739	No
6	STAG2	1421849_at 1450396_at	783	2.268	0.0852	No
7	RBBP7	1415775_at 1456227_x_at	895	2.102	0.0922	No
8	MORF4L2	1415778_at 1439413_x_at	1553	1.598	0.0712	No
9	FZD2	1418532_at 1418533_s_at	1567	1.586	0.0797	No
10	EP300	1434765_at	1726	1.492	0.0810	No
11	SP3	1431804_a_at 1459360_at	1896	1.408	0.0813	No
12	SLC12A5	1425337_at 1445933_at 1451674_at	1961	1.371	0.0862	No
13	LMO4	1420981_a_at 1439651_at	2192	1.273	0.0830	No
14	FUNDC1	1424215_at 1453369_a_at	2306	1.220	0.0848	No
15	GADD45G	1453851_a_at	2440	1.174	0.0854	No
16	PURA	1420628_at 1438219_at 1449934_at 1453783_at 1456898_at	2450	1.170	0.0917	No
17	ASCL1	1437086_at 1450164_at	2569	1.136	0.0928	No
18	ROM1	1448996_at	2631	1.120	0.0964	No
19	GRIN2A	1421616_at	2982	1.028	0.0862	No
20	PLEKHM1	1454746_at 1457195_at	3182	0.990	0.0828	No
21	FUT8	1441015_at 1442483_at 1443656_at 1456367_at 1460319_at	3186	0.989	0.0883	No
22	JUP	1426873_s_at	3447	0.932	0.0817	No
23	PRKAG1	1417690_at 1433533_x_at 1457803_at	3574	0.906	0.0811	No
24	ATP5G1	1416020_a_at 1444874_at	3587	0.902	0.0858	No
25	USP2	1417168_a_at 1417169_at	3610	0.898	0.0899	No
26	EIF4G1	1427036_a_at 1427037_at 1438686_at	3675	0.883	0.0920	No
27	RTN4	1421116_a_at 1435284_at 1437224_at 1439650_at 1442760_x_at 1452649_at	3723	0.872	0.0949	No
28	SAMD8	1434402_at 1453730_at 1458408_at	3741	0.869	0.0991	No
29	CRY1	1433733_a_at	3830	0.852	0.0999	No
30	MAPRE3	1427079_at	4020	0.817	0.0959	No
31	PPARD	1425703_at 1439797_at	4118	0.796	0.0960	No
32	HOXB6	1451660_a_at	4252	0.775	0.0944	No
33	PIM1	1423006_at 1435458_at	4418	0.743	0.0911	No
34	NR1D1	1421802_at 1426464_at	4466	0.735	0.0931	No
35	CDH3	1426673_at 1441255_at	4560	0.716	0.0929	No
36	KCNIP2	1421783_a_at 1425870_a_at	4573	0.713	0.0965	No
37	DUSP14	1431422_a_at	4609	0.704	0.0989	No
38	CLSTN3	1426989_at	4621	0.703	0.1024	No
39	ZFX	1419565_a_at 1425972_a_at 1428046_a_at 1449512_a_at	4625	0.702	0.1063	No
40	POFUT1	1443881_at 1450137_at 1456323_at	5021	0.636	0.0918	No
41	HHEX	1423319_at	5271	0.597	0.0838	No
42	LDHB	1416183_a_at 1434499_a_at 1442618_at 1448237_x_at 1455235_x_at	5432	0.575	0.0798	No
43	ADAM11	1450248_at	5908	0.512	0.0609	No
44	NR2E1	1434921_at 1457289_at	6498	0.441	0.0363	No
45	LIN28	1437752_at	6705	0.418	0.0293	No
46	BCL6B	1418421_at	6883	0.400	0.0234	No
47	PODN	1435180_at	7146	0.370	0.0135	No
48	CNTN2	1435165_at 1435166_at 1450523_at 1456962_at	7227	0.360	0.0119	No
49	IGSF4D	1435145_at 1435146_s_at 1435147_x_at 1436743_at 1440412_at 1444664_at 1459761_x_at	7340	0.349	0.0088	No
50	TOB1	1423176_at 1440844_at	7358	0.348	0.0100	No
51	CNTFR	1419429_at 1431663_a_at	7371	0.347	0.0114	No
52	GRIN2B	1422223_at 1431700_at	7473	0.336	0.0087	No
53	CPEB3	1437765_at 1445868_at 1455372_at 1456048_at	7588	0.323	0.0053	No
54	TBCC	1424644_at 1451423_at	7843	0.300	-0.0046	No
55	TPBG	1423310_at 1423311_s_at 1423312_at	7872	0.298	-0.0042	No
56	LAMA1	1418153_at	8068	0.279	-0.0116	No
57	PPP2R5D	1450560_a_at	8490	0.236	-0.0296	No
58	CREB3L1	1419295_at	8594	0.227	-0.0330	No
59	OBFC1	1434737_at 1441896_x_at 1445544_x_at 1456679_at 1458998_at	8607	0.225	-0.0323	No
60	PHF15	1430081_at 1455345_at	8828	0.205	-0.0412	No
61	STAT3	1424272_at 1426587_a_at 1459961_a_at 1460700_at	8928	0.196	-0.0446	No
62	MAPK10	1437195_x_at 1448342_at 1458002_at 1458062_at 1458513_at	9031	0.187	-0.0482	No
63	FEV	1425886_at	9053	0.186	-0.0481	No
64	SLC6A14	1420503_at 1420504_at	9135	0.178	-0.0508	No
65	XPR1	1426053_a_at 1426992_at 1426993_at 1437958_at 1444168_at 1444267_at 1450130_at 1452271_at	9150	0.177	-0.0505	No
66	LAMP2	1416343_a_at 1416344_at 1428094_at 1434503_s_at	9219	0.170	-0.0526	No
67	NFATC4	1423380_s_at 1432821_at 1454369_a_at	9526	0.143	-0.0658	No
68	CDX1	1449582_at	9688	0.128	-0.0725	No
69	RAB11B	1423448_at	9801	0.118	-0.0770	No
70	GLRA1	1422277_at 1437139_at	10135	0.091	-0.0918	No
71	BMP2	1423635_at	10142	0.091	-0.0915	No
72	MAGED2	1426306_a_at 1459873_x_at	10380	0.070	-0.1020	No
73	ACCN3	1439983_a_at	10419	0.067	-0.1034	No
74	ITPKA	1424037_at	10429	0.066	-0.1034	No
75	GRM7	1443119_at 1446854_at 1459532_at	10443	0.064	-0.1036	No
76	SCN5A	1422194_at 1458813_at	10444	0.064	-0.1033	No
77	CHST11	1428902_at 1450509_at	10636	0.048	-0.1118	No
78	BARHL1	1418811_at 1418812_a_at	10638	0.048	-0.1115	No
79	BDNF	1422168_a_at 1422169_a_at	10992	0.018	-0.1277	No
80	OTX2	1425926_a_at	11014	0.015	-0.1285	No
81	FOXP1	1421140_a_at 1421141_a_at 1421142_s_at 1435222_at 1438802_at 1443258_at 1446280_at 1447209_at 1455242_at 1456851_at	11199	-0.000	-0.1370	No
82	PFKFB3	1416432_at 1419882_at 1456676_a_at	11283	-0.008	-0.1408	No
83	HOXC4	1422870_at	11570	-0.035	-0.1537	No
84	PPP2R5E	1428461_at 1428462_at 1428463_a_at 1439401_x_at 1443533_at 1443949_at 1446356_at 1452788_at	11659	-0.043	-0.1575	No
85	HSD3B7	1416968_a_at 1442912_at	11827	-0.058	-0.1648	No
86	EED	1448653_at	11982	-0.071	-0.1715	No
87	MPL	1421461_at 1451919_a_at	12111	-0.082	-0.1769	No
88	CACNA1G	1423365_at	12328	-0.101	-0.1863	No
89	NEO1	1423513_at 1434931_at 1440789_at 1444295_at 1447693_s_at 1447694_x_at 1459485_at	12700	-0.135	-0.2025	No
90	PRDM10	1441764_at 1444812_at	12716	-0.136	-0.2025	No
91	ARHGAP6	1417704_a_at 1451867_x_at 1456333_a_at	12997	-0.164	-0.2144	No
92	PHOX2A	1418620_at	13051	-0.169	-0.2158	No
93	FBS1	1425276_at 1451645_at	13137	-0.177	-0.2187	No
94	ZBTB4	1429722_at 1460488_at	13196	-0.182	-0.2204	No
95	NLK	1419112_at 1435970_at 1443279_at 1445427_at 1456467_s_at	13387	-0.199	-0.2280	No
96	BAI2	1435558_at	13465	-0.205	-0.2303	No
97	FOXP4	1429719_at 1431088_at 1431437_at	13598	-0.216	-0.2351	No
98	KIF9	1420395_a_at	13738	-0.229	-0.2402	No
99	RHOG	1422572_at	13872	-0.243	-0.2449	No
100	FAF1	1418242_at 1434370_s_at	13938	-0.249	-0.2465	No
101	ODF3	1420446_at 1441916_s_at	14164	-0.273	-0.2553	No
102	DNMT3A	1423063_at 1423064_at 1423065_at 1423066_at 1442309_at 1460324_at	14356	-0.293	-0.2624	No
103	ADAMTS7	1452339_at	14401	-0.296	-0.2627	No
104	ADAMTS3	1441693_at 1458143_at	14449	-0.301	-0.2631	No
105	FLT1	1419300_at 1440926_at 1451756_at 1454037_a_at	14488	-0.305	-0.2631	No
106	ITGB8	1436223_at	14559	-0.313	-0.2645	No
107	EFNB3	1423085_at	14593	-0.317	-0.2642	No
108	SPA17	1417635_at	14951	-0.357	-0.2786	No
109	NOL4	1430189_at 1441447_at 1456387_at	15006	-0.363	-0.2790	No
110	ACADSB	1455446_x_at	15096	-0.373	-0.2809	No
111	EPHB1	1455188_at	15458	-0.413	-0.2952	No
112	ASB7	1435010_at 1438744_at 1446319_at 1450363_at	15514	-0.420	-0.2953	No
113	MAP1A	1460566_at	15521	-0.421	-0.2931	No
114	CHCHD7	1440158_x_at 1444318_at 1446844_at 1454640_at	15682	-0.441	-0.2980	No
115	NKIRAS2	1424416_at	15803	-0.454	-0.3009	No
116	KLF14	1457397_at	16103	-0.493	-0.3118	No
117	EMX2	1456258_at	16529	-0.550	-0.3282	No
118	PHF6	1430415_at 1453761_at 1454625_at	16738	-0.581	-0.3344	No
119	HOXB8	1452493_s_at	17230	-0.658	-0.3532	No
120	KDELR1	1460211_a_at	17533	-0.708	-0.3630	No
121	KLF16	1416350_at	17564	-0.715	-0.3603	No
122	REV3L	1424632_a_at 1426194_x_at 1451960_a_at	17606	-0.723	-0.3580	No
123	NPR2	1427191_at	17852	-0.773	-0.3648	Yes
124	ALDOC	1424714_at 1451461_a_at	17878	-0.777	-0.3615	Yes
125	THAP11	1416428_at	17899	-0.781	-0.3580	Yes
126	CHES1	1434002_at 1436925_at 1438255_at 1440607_at 1444555_at 1447325_at 1453094_at	17935	-0.788	-0.3550	Yes
127	TNNI2	1416889_at 1438608_at 1438609_x_at	17980	-0.796	-0.3525	Yes
128	GSK3B	1434439_at 1437001_at 1439931_at 1439949_at 1451020_at 1454958_at	18012	-0.801	-0.3493	Yes
129	KCNJ11	1450515_at 1455417_at	18090	-0.819	-0.3482	Yes
130	AGER	1420428_at 1441958_s_at	18095	-0.820	-0.3436	Yes
131	HNRPL	1424101_at 1445594_at	18221	-0.855	-0.3445	Yes
132	PBX2	1418893_at 1418894_s_at 1449261_at	18251	-0.862	-0.3409	Yes
133	BCL7A	1428207_at 1428208_at 1451855_at 1459416_at	18414	-0.902	-0.3431	Yes
134	SPAG7	1433940_at	18508	-0.923	-0.3421	Yes
135	IRS1	1423104_at	18523	-0.925	-0.3374	Yes
136	PLAGL2	1417517_at 1417518_at 1417519_at 1442235_at	18532	-0.928	-0.3325	Yes
137	PCTK1	1415956_a_at 1438314_at 1443296_at 1460169_a_at	18793	-0.982	-0.3388	Yes
138	MIP	1421039_at 1435447_at	18894	-1.000	-0.3377	Yes
139	PRKCH	1422079_at 1434248_at	18956	-1.009	-0.3347	Yes
140	H1F0	1423702_at 1450522_a_at	18961	-1.010	-0.3291	Yes
141	WNT10A	1460657_at	18963	-1.010	-0.3233	Yes
142	CDK6	1435338_at 1440040_at 1455287_at 1460291_at	19191	-1.049	-0.3277	Yes
143	CASKIN2	1450691_at	19194	-1.049	-0.3218	Yes
144	PRDM8	1431852_at 1455925_at	19305	-1.079	-0.3207	Yes
145	MIB1	1433853_at 1446818_at 1451818_at 1454740_at	19382	-1.101	-0.3178	Yes
146	EIF2C3	1435904_at 1441063_at 1441089_at 1442009_at 1458476_at	19478	-1.127	-0.3157	Yes
147	RAB34	1416590_a_at 1416591_at	19685	-1.193	-0.3183	Yes
148	RNF40	1438191_a_at	19868	-1.259	-0.3195	Yes
149	BMP7	1418910_at 1432410_a_at	19904	-1.272	-0.3138	Yes
150	JUNB	1415899_at	20020	-1.328	-0.3115	Yes
151	ANKRD17	1415726_at 1421220_at 1436775_a_at 1444608_at 1445826_at 1454763_at 1459952_at	20138	-1.383	-0.3089	Yes
152	DNAJB5	1421961_a_at 1421962_at 1450436_s_at	20155	-1.390	-0.3017	Yes
153	CDAN1	1428166_at	20380	-1.502	-0.3033	Yes
154	RUNX1	1422864_at 1422865_at 1427650_a_at 1427847_at 1440878_at 1444527_at 1446930_at 1452530_a_at 1452531_at 1452578_at 1459470_at	20490	-1.553	-0.2994	Yes
155	POLR2A	1422311_a_at 1426242_at 1458710_at	20505	-1.561	-0.2911	Yes
156	RASGRP2	1417804_at 1438932_at 1438933_x_at 1442264_at 1449613_at	20508	-1.563	-0.2822	Yes
157	HDAC3	1426437_s_at	20615	-1.638	-0.2777	Yes
158	TRERF1	1444654_at	20616	-1.639	-0.2683	Yes
159	NLGN2	1455143_at 1460013_at	20618	-1.639	-0.2589	Yes
160	TMOD4	1449969_at	20637	-1.650	-0.2503	Yes
161	PVRL1	1438111_at 1438421_at 1440131_at 1446488_at 1450819_at	20717	-1.706	-0.2441	Yes
162	ZDHHC14	1423668_at 1437614_x_at 1437616_x_at 1438151_x_at 1438619_x_at 1438975_x_at	20762	-1.732	-0.2362	Yes
163	MAML1	1426769_s_at 1441697_at 1445045_at 1452188_at	20779	-1.742	-0.2270	Yes
164	CALM3	1426710_at 1438825_at 1438826_x_at 1450864_at	20855	-1.799	-0.2201	Yes
165	CHD2	1444246_at 1445843_at	21056	-1.957	-0.2180	Yes
166	YWHAE	1426384_a_at 1426385_x_at 1435702_s_at 1438839_a_at 1440841_at 1457173_at	21199	-2.056	-0.2128	Yes
167	DET1	1429218_at 1444774_at	21239	-2.096	-0.2025	Yes
168	KCMF1	1418694_at 1418695_a_at 1449180_at	21428	-2.363	-0.1976	Yes
169	CTDSP1	1452055_at	21478	-2.429	-0.1859	Yes
170	LHX2	1418317_at	21621	-2.694	-0.1770	Yes
171	PLAG1	1421745_at 1443943_at	21669	-2.847	-0.1628	Yes
172	SLC4A2	1416637_at	21733	-3.114	-0.1478	Yes
173	ZBTB9	1429125_at	21774	-3.374	-0.1303	Yes
174	SEC24C	1430250_at 1452147_at	21806	-3.600	-0.1111	Yes
175	SMTN	1452469_a_at	21860	-4.679	-0.0867	Yes
176	DNAJC7	1448362_at 1459704_at	21907	-7.115	-0.0479	Yes
177	PABPC1	1418883_a_at 1419500_at 1453840_at	21936	-8.578	-0.0000	Yes