DatasetSet_01_ATM_minus_versus_SCID.phenotype_ATM_minus_versus_SCID.cls
#ATM_minus_versus_SCID
Phenotypephenotype_ATM_minus_versus_SCID.cls#ATM_minus_versus_SCID
Upregulated in classSCID
GeneSetV$ETS_Q4
Enrichment Score (ES)-0.31623805
Normalized Enrichment Score (NES)-1.3148407
Nominal p-value0.04109589
FDR q-value0.65668696
FWER p-Value0.999
Table: GSEA Results Summary



Fig 1: Enrichment plot: V$ETS_Q4   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEDESCRIPTION
(from dataset)
GENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1TCERG11421033_a_at 1434434_s_at 1450100_a_at238.6350.0422No
2CANX1415692_s_at 1422845_at 1428935_at507.1300.0767No
3NASP1416042_s_at 1416043_at 1440328_at 1442728_at1404.5330.0953No
4AMD11448484_at1594.2930.1160No
5ETV51420998_at 1428142_at 1450082_s_at2263.6590.1313No
6SPIB1460407_at7352.3410.1197No
7SOST1421245_at 1436240_at 1450179_at7452.3170.1309No
8HMGA11416184_s_at8492.1790.1370No
9CD79A1418830_at8612.1510.1473No
10RGS31425701_a_at 1427648_at 1449516_a_at 1454026_a_at9981.9790.1510No
11ARHGAP151429881_at 1435959_at 1441650_at13951.6870.1412No
12IKBKB1426207_at 1426333_a_at 1432275_at 1445141_at 1454184_a_at14091.6800.1490No
13GATA31448886_at14921.6370.1535No
14ARRB21426239_s_at 1451987_at14941.6370.1616No
15ZFP911426326_at 1429615_at 1429616_at 1459444_at15431.6040.1674No
16LCP11415983_at 1448160_at15921.5640.1731No
17E2F31427462_at 1434564_at16011.5590.1805No
18ARSB1429190_at 1458281_at19821.3620.1699No
19NEDD41421955_a_at 1444044_at 1450431_a_at 1451109_a_at20461.3340.1736No
20CCL21420380_at20981.3100.1779No
21GGTL31451094_at23641.2030.1717No
22PPP1R16B1425414_at 1455080_at24041.1880.1759No
23CENTB11434873_a_at 1434874_x_at 1437117_at 1455125_at24661.1650.1789No
24GMFG1419193_a_at 1419194_s_at25671.1360.1800No
25ADCY41418098_at26341.1190.1826No
26TCF121421908_a_at 1427670_a_at 1438762_at 1439209_at 1439619_at 1443012_at 1444620_at 1445093_at 1445133_at 1457524_at 1458337_at26991.1000.1851No
27RPS31435151_a_at 1447563_at 1455600_at27471.0850.1884No
28KLF131432543_a_at 1456030_at28381.0640.1896No
29DPP31431594_at 1448215_a_at29031.0450.1919No
30MARK11419834_x_at 1425509_at 1425510_at 1425511_at 1449630_s_at29571.0330.1946No
31PCDH71427592_at 1437442_at 1449249_at 1456214_at31650.9940.1901No
32UBE2L31417907_at 1417908_s_at 1448879_at 1448880_at33550.9520.1862No
33TNFSF111419083_at 1451944_a_at35360.9140.1825No
34PRKAG11417690_at 1433533_x_at 1457803_at35740.9060.1853No
35ST7L1427916_at 1456363_at38790.8420.1756No
36CRADD1427505_a_at 1443430_at39240.8330.1777No
37MMP31418945_at41500.7920.1713No
38LPXN1424965_at41530.7920.1752No
39ITPR11417279_at 1443492_at 1457189_at 1460203_at42750.7690.1735No
40BLNK1451780_at43250.7610.1751No
41NR1D11421802_at 1426464_at44660.7350.1723No
42ITPR21421678_at 1424833_at 1424834_s_at 1427287_s_at 1427693_at 1444418_at 1444551_at 1447328_at45270.7210.1732No
43ACSL41418911_s_at 1433531_at 1451828_a_at46050.7050.1732No
44RNF121417250_at 1418730_at 1418731_at 1439403_x_at 1440850_at 1443167_at46430.6980.1750No
45POU3F41422164_at 1422165_at46970.6890.1760No
46LRFN41454700_at47420.6850.1774No
47ACTR31426392_a_at 1434968_a_at 1452051_at51860.6090.1601No
48TIMP41423405_at 1450974_at53220.5900.1568No
49TEAD31420593_a_at56250.5500.1457No
50SLC30A71450697_at56370.5480.1479No
51TPP21421893_a_at 1421894_a_at 1430575_a_at 1430576_at 1438264_a_at56610.5450.1496No
52EPN31424960_at56890.5410.1511No
53POLD41427885_at58100.5250.1482No
54STRBP1421125_at 1442465_s_at 1442622_at 1444001_at 1452061_s_at 1457478_at59680.5050.1435No
55PLCB21452481_at59700.5050.1460No
56RIN11424507_at 1437460_x_at61730.4800.1391No
57PAX61419271_at 1425960_s_at 1437816_at 1452526_a_at 1456342_at68980.3970.1078No
58ERG1425370_a_at 1440244_at69170.3950.1090No
59TENC11452264_at77050.3140.0744No
60ERCC11417328_at 1437447_s_at 1441838_at 1445266_at78100.3030.0711No
61STARD131452604_at78240.3020.0720No
62SOX141427609_at79560.2900.0675No
63CD2BP21417223_at 1417224_a_at 1448624_at80110.2860.0664No
64LIF1421206_at 1421207_at 1450160_at81020.2760.0637No
65UXT1418986_a_at82240.2640.0594No
66SLC41A11444511_at 1460565_at82430.2620.0599No
67AGPAT11421024_at 1421025_at87840.2100.0361No
68DGKA1418578_at90280.1880.0259No
69PPP1R14C1417701_at 1443799_at 1446671_at90800.1830.0245No
70TREML21419837_at 1440298_at 1440938_at 1444718_at96750.129-0.0022No
71TBN1416450_at 1416451_s_at97610.122-0.0055No
72ADAMTS41452595_at99000.109-0.0113No
73IL131420802_at99010.109-0.0107No
74CHIC21419659_s_at 1429050_at 1445911_at100050.100-0.0149No
75NME21448808_a_at100340.099-0.0157No
76ELK31417662_at 1442986_at 1445886_at 1448797_at101090.093-0.0187No
77TWIST11418733_at103130.077-0.0276No
78RPL411422623_x_at 1455578_x_at109270.025-0.0557No
79KIF3B1420987_at 1450073_at 1450074_at110510.012-0.0613No
80FOXP11421140_a_at 1421141_a_at 1421142_s_at 1435222_at 1438802_at 1443258_at 1446280_at 1447209_at 1455242_at 1456851_at11199-0.000-0.0680No
81HOXC41422870_at11570-0.035-0.0848No
82HCST1419119_at11574-0.035-0.0848No
83MGAT4A1444347_at11721-0.048-0.0913No
84RAP2C1428119_a_at 1437016_x_at 1460430_at11906-0.064-0.0994No
85SLC9A91433719_at 1437488_at 1447149_at11917-0.065-0.0995No
86BAG41418707_at 1439024_at 1449186_at11993-0.072-0.1026No
87CRSP71452282_at 1458377_at12338-0.102-0.1179No
88POF1B1427492_at12372-0.105-0.1189No
89PDGFB1450413_at 1450414_at12477-0.115-0.1231No
90SOX21416967_at12687-0.133-0.1321No
91HOXA101431475_a_at 1446408_at12815-0.146-0.1372No
92KLF121439846_at 1439847_s_at 1441040_at 1455521_at12851-0.149-0.1380No
93SCN3A1421705_at 1439204_at12950-0.160-0.1417No
94RHOV1424976_at13133-0.176-0.1492No
95DPPA41429597_at13191-0.181-0.1509No
96DRP21440452_at 1441224_at 1441542_at13229-0.184-0.1517No
97FGFR21420847_a_at 1433489_s_at 1443996_at13308-0.190-0.1543No
98CALM21422414_a_at 1423807_a_at13402-0.200-0.1576No
99GPR1501442261_at 1447485_at13776-0.233-0.1736No
100DDIT31417516_at 1443897_at13837-0.239-0.1752No
101BAZ2A1427209_at 1427210_at 1438192_s_at14296-0.286-0.1948No
102CSAD1427981_a_at14345-0.291-0.1955No
103HOXA11420565_at14728-0.332-0.2114No
104NEDD81423715_a_at 1440996_at 1445811_at14908-0.352-0.2179No
105PPP1R9B1447247_at 1447486_at15041-0.367-0.2221No
106RIN31434684_at 1442530_at15288-0.393-0.2314No
107LCP21418641_at 1418642_at15763-0.450-0.2510No
108SEMA4C1433920_at15978-0.475-0.2584No
109HM131417287_at 1428855_at 1428856_at 1438456_at 1438865_at 1455631_at16008-0.480-0.2574No
110ACSL51428082_at16318-0.521-0.2689No
111HYAL21448679_at16536-0.551-0.2762No
112GJA51422192_at 1429101_at16800-0.590-0.2853No
113USP31425022_at 1425023_at 1435531_at 1441056_at 1446886_at16998-0.620-0.2912No
114FURIN1418518_at17031-0.625-0.2896No
115ITGB71418741_at17109-0.638-0.2899No
116LSM11423873_at 1441452_at17634-0.728-0.3104No
117CAST1426098_a_at 1435972_at 1451413_at17641-0.729-0.3070No
118GMPR21416356_at 1429180_at17739-0.748-0.3077No
119DAB2IP1433558_at 1441170_a_at17833-0.768-0.3081No
120NDUFS21451096_at17930-0.786-0.3086No
121CHES11434002_at 1436925_at 1438255_at 1440607_at 1444555_at 1447325_at 1453094_at17935-0.788-0.3048No
122ELMO11424523_at 1446610_at 1450208_a_at17968-0.793-0.3023No
123EXTL21422538_at 1422539_at18033-0.806-0.3012No
124E2F51417444_at 1447625_at 1460207_s_at18159-0.836-0.3028No
125VCAM11415989_at 1436003_at 1448162_at 1451314_a_at18314-0.877-0.3055No
126SRPR1423670_a_at 1427570_at18549-0.933-0.3116Yes
127SIGIRR1449163_at18617-0.949-0.3099Yes
128CPNE81430520_at 1430521_s_at 1431146_a_at18661-0.956-0.3071Yes
129MAP4K21428297_at 1434833_at 1450244_a_at18676-0.960-0.3029Yes
130PRKCBP11426614_at 1429415_at 1445827_at 1456143_at 1458617_at18686-0.962-0.2985Yes
131FCHO11428575_at 1436077_a_at 1436078_at18700-0.965-0.2943Yes
132TGFB31417455_at18927-1.005-0.2996Yes
133PTK21423059_at 1430827_a_at 1439198_at 1440082_at 1441475_at 1443384_at 1445137_at18966-1.010-0.2963Yes
134PTPN111421196_at 1427699_a_at 1451225_at18980-1.013-0.2918Yes
135DMTF11422636_at 1440349_at 1456697_x_at19054-1.026-0.2901Yes
136UTX1427235_at 1427672_a_at 1440524_at 1441201_at 1445198_at 1446234_at 1446278_at19152-1.041-0.2893Yes
137RAE11429528_at 1444256_at 1459822_at19269-1.070-0.2893Yes
138ZNF351460252_s_at19500-1.137-0.2941Yes
139STAT5B1422102_a_at 1422103_a_at19654-1.181-0.2953Yes
140ARPC1B1416226_at19803-1.236-0.2959Yes
141RBMS21423540_at 1433979_at19873-1.261-0.2927Yes
142PML1448757_at 1456103_at 1459137_at19910-1.274-0.2880Yes
143JUNB1415899_at20020-1.328-0.2864Yes
144DDX231430050_at20026-1.330-0.2799Yes
145LTBR1416435_at20067-1.353-0.2750Yes
146DOCK111429028_at 1443467_at20097-1.364-0.2695Yes
147PDAP11434019_at 1434020_at20118-1.376-0.2635Yes
148PIK3R41460352_s_at20125-1.378-0.2569Yes
149CAP11417461_at 1417462_at20134-1.382-0.2503Yes
150RGS141419221_a_at20156-1.390-0.2443Yes
151CENTG11419789_at20249-1.434-0.2414Yes
152SEPT11449898_at20400-1.514-0.2407Yes
153GFI11417679_at20529-1.580-0.2387Yes
154AP1G21419113_at20642-1.653-0.2355Yes
155ETF11420023_at 1420024_s_at 1424013_at 1440629_at 1451208_at20713-1.702-0.2302Yes
156CAPZA11439455_x_at 1440380_at20744-1.719-0.2230Yes
157ARHGAP41419296_at 1443360_x_at 1458190_at20861-1.804-0.2193Yes
158BIN31417691_at20869-1.814-0.2105Yes
159PDLIM21423946_at20891-1.837-0.2023Yes
160GAB21419829_a_at 1420785_at 1439786_at 1446860_at20896-1.841-0.1933Yes
161CNOT101433882_at 1453654_at 1459756_at 1459757_x_at20960-1.885-0.1867Yes
162FOXO3A1434831_a_at 1434832_at 1439598_at 1444226_at 1450236_at 1458279_at20992-1.913-0.1786Yes
163CORO1A1416246_a_at 1435288_at 1455269_a_at21037-1.945-0.1708Yes
164CHD21444246_at 1445843_at21056-1.957-0.1619Yes
165IRAK41421670_a_at 1451749_at21283-2.156-0.1614Yes
166TRIM411424275_s_at 1440268_at21284-2.158-0.1506Yes
167DGKZ1426738_at 1452169_a_at21319-2.198-0.1412Yes
168VAV11422932_a_at21340-2.228-0.1310Yes
169FXYD51418296_at21361-2.252-0.1206Yes
170SEC61A11416189_a_at 1416190_a_at 1416191_at 1434986_a_at 1448242_at 1455987_at21381-2.292-0.1100Yes
171SLC9A3R11438115_a_at 1438116_x_at 1450982_at21418-2.350-0.0999Yes
172HCLS11418842_at21484-2.441-0.0906Yes
173NDUFA41424085_at21546-2.517-0.0808Yes
174KCNAB21416956_at 1425885_a_at21670-2.849-0.0722Yes
175MADD1425735_at 1455502_at21698-2.944-0.0587Yes
176CENTD21428064_at21715-3.020-0.0443Yes
177SEC24C1430250_at 1452147_at21806-3.600-0.0304Yes
178RBM41416920_at 1437322_at 1455517_at21909-7.2600.0012Yes
Table: GSEA details [plain text format]



Fig 2: V$ETS_Q4   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: V$ETS_Q4: Random ES distribution   
Gene set null distribution of ES for V$ETS_Q4