Details for gene set V$ALPHACP1

Table: GSEA Results Summary

Dataset	Set_01_ATM_minus_versus_SCID.phenotype_ATM_minus_versus_SCID.cls #ATM_minus_versus_SCID
Phenotype	phenotype_ATM_minus_versus_SCID.cls#ATM_minus_versus_SCID
Upregulated in class	SCID
GeneSet	V$ALPHACP1_01
Enrichment Score (ES)	-0.31545302
Normalized Enrichment Score (NES)	-1.3219013
Nominal p-value	0.026954178
FDR q-value	0.6900388
FWER p-Value	0.999

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	DLG7	1438811_at 1455730_at	60	6.292	0.0330	No
2	USP1	1423674_at 1423675_at 1451080_at	158	4.311	0.0530	No
3	DNAJC12	1417441_at	363	3.080	0.0611	No
4	JARID2	1422698_s_at 1446082_at 1450710_at 1456661_at	378	3.057	0.0778	No
5	XPO1	1418442_at 1418443_at 1448070_at	421	2.975	0.0928	No
6	ICAM4	1422930_at	530	2.746	0.1034	No
7	SOST	1421245_at 1436240_at 1450179_at	745	2.317	0.1068	No
8	PPP1R1B	1451331_at	818	2.218	0.1160	No
9	STAMBP	1416317_a_at 1431962_a_at	1378	1.697	0.1000	No
10	ZFP91	1426326_at 1429615_at 1429616_at 1459444_at	1543	1.604	0.1016	No
11	CD68	1449164_at	1595	1.563	0.1081	No
12	ELAVL4	1428741_at 1450258_a_at 1452894_at 1457399_at	1599	1.560	0.1168	No
13	MRPS18B	1451164_a_at	1616	1.552	0.1249	No
14	PCNA	1417947_at	1847	1.435	0.1225	No
15	WNT8B	1421439_at	1851	1.434	0.1305	No
16	ICAM5	1418619_at	2003	1.352	0.1312	No
17	SLC25A10	1416954_at 1416955_at	2027	1.343	0.1378	No
18	SLC25A13	1449481_at	2160	1.287	0.1390	No
19	FGF7	1422243_at 1438405_at	2673	1.107	0.1218	No
20	DNAJB11	1423151_at	2720	1.093	0.1259	No
21	MLSTD2	1426369_at 1426370_at 1426371_at 1453550_a_at	2760	1.083	0.1302	No
22	SMAD2	1420634_a_at 1458304_at	2837	1.064	0.1328	No
23	HSD17B12	1450010_at 1450011_at 1459530_at	2867	1.056	0.1375	No
24	SSBP3	1425940_a_at 1427917_s_at 1439136_at 1443554_at 1457560_at 1458749_at	2981	1.028	0.1381	No
25	SON	1420951_a_at 1420952_at 1435862_at 1437924_at 1438871_at 1439074_a_at 1455634_at 1456630_x_at 1457596_at	3029	1.017	0.1417	No
26	ORC4L	1423336_at 1423337_at 1431172_at 1453804_a_at	3120	1.000	0.1433	No
27	PNRC1	1433668_at 1438524_x_at 1439513_at	3129	0.999	0.1486	No
28	EHF	1419474_a_at 1419475_a_at 1447760_x_at 1451375_at	3150	0.996	0.1533	No
29	ATOH1	1449822_at	3174	0.992	0.1579	No
30	SNCA	1418493_a_at 1431022_at 1436853_a_at 1446391_at	3224	0.981	0.1612	No
31	PTMA	1423455_at	3433	0.935	0.1570	No
32	COL1A1	1423669_at 1455494_at	3450	0.931	0.1615	No
33	LRP8	1421459_a_at 1440882_at 1442347_at	3494	0.923	0.1648	No
34	TNFSF11	1419083_at 1451944_a_at	3536	0.914	0.1681	No
35	NKX6-2	1427420_at	3567	0.908	0.1719	No
36	SYCP3	1435870_at 1449534_at	3774	0.862	0.1673	No
37	GATM	1423569_at	4728	0.685	0.1274	No
38	NRGN	1423231_at	4837	0.668	0.1262	No
39	ZFHX1B	1422748_at 1434298_at 1442393_at 1445518_at 1454200_at 1456389_at	4852	0.666	0.1293	No
40	MRE11A	1416748_a_at 1441990_at 1458509_at	5237	0.602	0.1151	No
41	SFRP1	1416594_at 1428136_at 1438620_x_at 1448395_at 1460187_at	5537	0.560	0.1046	No
42	GART	1416283_at 1424435_a_at 1424436_at 1441911_x_at	5735	0.535	0.0985	No
43	MID1	1422055_at 1438239_at 1441929_at 1443666_at	5841	0.520	0.0967	No
44	ADAMTSL1	1430313_at	5844	0.519	0.0995	No
45	CDH9	1427618_at	5901	0.513	0.0999	No
46	TDO2	1419093_at 1449337_at	6126	0.485	0.0923	No
47	ELK1	1421896_at 1421897_at 1446390_at	6157	0.482	0.0937	No
48	ENAM	1421699_at	6227	0.474	0.0932	No
49	SMCR7	1434072_at	6623	0.427	0.0775	No
50	TPCN2	1424304_at 1436814_at 1436815_x_at	6866	0.402	0.0686	No
51	SHC3	1450326_at	7066	0.380	0.0616	No
52	RAD9B	1425800_at 1439955_at	7133	0.371	0.0607	No
53	CNTN2	1435165_at 1435166_at 1450523_at 1456962_at	7227	0.360	0.0585	No
54	ERF	1422114_at 1435561_at	7282	0.355	0.0580	No
55	SLIT3	1427086_at 1452296_at	7345	0.349	0.0571	No
56	ZDHHC5	1426310_at 1426311_s_at	7852	0.299	0.0356	No
57	IGSF4	1417376_a_at 1417377_at 1417378_at 1431611_a_at	7883	0.297	0.0359	No
58	SOX14	1427609_at	7956	0.290	0.0342	No
59	ARID4A	1436191_at 1438464_at 1456420_at	8177	0.269	0.0256	No
60	FLRT3	1429310_at 1453102_at	8428	0.242	0.0155	No
61	SPRY2	1421656_at 1436584_at	8518	0.233	0.0128	No
62	PPP2R2B	1426621_a_at	8567	0.229	0.0118	No
63	DLX3	1422037_at 1450475_at	8586	0.227	0.0123	No
64	CDH6	1450288_at	8732	0.214	0.0069	No
65	CYP24A1	1418866_at 1418867_at	8984	0.191	-0.0036	No
66	ZBTB10	1458695_at	8988	0.191	-0.0026	No
67	OLIG2	1416232_at	9021	0.188	-0.0030	No
68	ELAVL3	1452524_a_at	9091	0.182	-0.0052	No
69	MYOCD	1425808_a_at 1425978_at	9339	0.159	-0.0156	No
70	KLF1	1418600_at	9438	0.150	-0.0193	No
71	NFATC4	1423380_s_at 1432821_at 1454369_a_at	9526	0.143	-0.0225	No
72	SF1	1422321_a_at 1423750_a_at 1423751_at 1459765_s_at 1459766_x_at	9904	0.108	-0.0392	No
73	ASPM	1422814_at 1441520_at 1452459_at 1458560_at 1458873_at	10068	0.096	-0.0461	No
74	ISL1	1422720_at 1450723_at	10150	0.090	-0.0493	No
75	HK2	1422612_at	10461	0.063	-0.0632	No
76	ZNF385	1418865_at	10530	0.058	-0.0660	No
77	OTX2	1425926_a_at	11014	0.015	-0.0882	No
78	PCF11	1427159_at 1427160_at 1428724_at 1456489_at	11052	0.012	-0.0898	No
79	DDX4	1427242_at	11542	-0.032	-0.1121	No
80	RGN	1448852_at	11642	-0.041	-0.1164	No
81	HES1	1418102_at	11685	-0.045	-0.1181	No
82	SIX1	1427277_at	11722	-0.048	-0.1195	No
83	PAX1	1449359_at	11795	-0.054	-0.1225	No
84	PRKCSH	1416339_a_at	12007	-0.073	-0.1317	No
85	SDS	1424744_at	12064	-0.078	-0.1339	No
86	POU3F3	1422331_at 1435197_at	12119	-0.083	-0.1359	No
87	RAB39	1437762_at	12135	-0.084	-0.1361	No
88	FGF20	1421677_at	12263	-0.095	-0.1414	No
89	PCP4	1460214_at	12318	-0.099	-0.1433	No
90	SORT1	1423362_at 1423363_at 1450955_s_at	12377	-0.105	-0.1454	No
91	WNT3	1450763_x_at	12455	-0.113	-0.1483	No
92	PRDM10	1441764_at 1444812_at	12716	-0.136	-0.1595	No
93	CDH1	1443509_at 1448261_at	12743	-0.138	-0.1599	No
94	HOXA10	1431475_a_at 1446408_at	12815	-0.146	-0.1623	No
95	DND1	1455367_at	12909	-0.155	-0.1657	No
96	NRL	1450946_at	13095	-0.172	-0.1732	No
97	PRCP	1431361_at 1444419_at 1452190_at 1452191_at	13207	-0.183	-0.1773	No
98	GRIA3	1420563_at 1434728_at	13271	-0.188	-0.1791	No
99	CALM2	1422414_a_at 1423807_a_at	13402	-0.200	-0.1839	No
100	BRD2	1423502_at 1437210_a_at	13481	-0.206	-0.1864	No
101	USP5	1448311_at	13515	-0.210	-0.1867	No
102	CALD1	1424768_at 1424769_s_at 1424770_at 1433146_at 1433147_at 1458057_at	13541	-0.212	-0.1866	No
103	FBXO24	1431864_at	13595	-0.216	-0.1878	No
104	ESRRB	1422986_at 1436926_at 1441921_x_at	13621	-0.219	-0.1877	No
105	ABCD2	1419748_at 1438431_at 1439835_x_at 1446962_at 1456812_at	13640	-0.220	-0.1873	No
106	KLHL4	1439078_at 1445318_at	13912	-0.247	-0.1984	No
107	SP1	1418180_at 1448994_at 1454852_at	14131	-0.269	-0.2069	No
108	HOXA2	1419602_at	14617	-0.320	-0.2273	No
109	RGS8	1453060_at	14640	-0.323	-0.2265	No
110	PRKCZ	1418085_at 1449692_at 1454902_at	14802	-0.341	-0.2320	No
111	ERO1LB	1425705_a_at 1434714_at 1449948_at	14849	-0.346	-0.2321	No
112	DUSP6	1415834_at	15275	-0.393	-0.2494	No
113	NID2	1423516_a_at	15335	-0.398	-0.2499	No
114	USH3A	1438347_at	15393	-0.405	-0.2502	No
115	CKS2	1417457_at 1417458_s_at	15444	-0.411	-0.2502	No
116	ASB7	1435010_at 1438744_at 1446319_at 1450363_at	15514	-0.420	-0.2510	No
117	SP2	1426237_at 1447730_at	15810	-0.455	-0.2619	No
118	CLTA	1421062_s_at 1434540_a_at 1444328_at	16099	-0.492	-0.2724	No
119	EBF2	1418494_at 1446128_at 1449101_at 1449102_at	16180	-0.502	-0.2732	No
120	SLC25A25	1424735_at 1447856_x_at 1454284_at	16247	-0.512	-0.2733	No
121	LMO3	1455754_at	16305	-0.519	-0.2730	No
122	SLC17A6	1418610_at 1428379_at	16461	-0.540	-0.2771	No
123	UGP2	1426460_a_at 1426461_at 1434485_a_at 1434486_x_at 1451742_a_at	16542	-0.552	-0.2776	No
124	UBE2C	1452954_at	16613	-0.563	-0.2776	No
125	ILF2	1417948_s_at 1417949_at	16734	-0.580	-0.2798	No
126	FDPS	1423418_at	16900	-0.604	-0.2840	No
127	CDH10	1425092_at 1433302_at 1446399_at 1460538_at	17038	-0.627	-0.2867	No
128	NEK2	1417299_at 1437579_at 1437580_s_at 1443999_at	17405	-0.687	-0.2997	No
129	HOXD10	1418606_at	17434	-0.691	-0.2970	No
130	NDUFB3	1416547_at	17495	-0.702	-0.2958	No
131	GPC3	1443240_at 1446525_at 1450990_at	17751	-0.751	-0.3032	No
132	TLE1	1422751_at 1434033_at	17870	-0.776	-0.3043	No
133	CHES1	1434002_at 1436925_at 1438255_at 1440607_at 1444555_at 1447325_at 1453094_at	17935	-0.788	-0.3027	No
134	LRCH4	1424878_at 1424879_at 1451522_s_at 1454389_at 1454390_at	17994	-0.799	-0.3009	No
135	H3F3B	1420376_a_at 1430357_at 1455725_a_at	18143	-0.833	-0.3029	No
136	HNRPL	1424101_at 1445594_at	18221	-0.855	-0.3016	No
137	IRS1	1423104_at	18523	-0.925	-0.3102	Yes
138	PANK1	1418715_at 1429813_at 1429814_at 1431028_a_at 1457110_at	18528	-0.927	-0.3051	Yes
139	BAHD1	1433703_s_at	18646	-0.954	-0.3051	Yes
140	CRYL1	1416795_at 1430681_at 1447112_s_at 1459589_at	18690	-0.963	-0.3016	Yes
141	PPM1B	1425330_a_at 1426382_at 1441479_at 1451669_at	18864	-0.995	-0.3039	Yes
142	TGFB3	1417455_at	18927	-1.005	-0.3010	Yes
143	LDB2	1421101_a_at 1439557_s_at 1445126_at 1456786_at	19072	-1.028	-0.3018	Yes
144	RBM3	1429169_at	19113	-1.034	-0.2978	Yes
145	PNRC2	1416186_at 1416187_s_at 1438766_at	19193	-1.049	-0.2954	Yes
146	NFYA	1422082_a_at 1427808_at 1452560_a_at	19218	-1.056	-0.2906	Yes
147	CDCA3	1448000_at 1448001_x_at 1452040_a_at	19354	-1.096	-0.2905	Yes
148	CNOT3	1435965_at 1441465_at	19461	-1.123	-0.2890	Yes
149	ABCA7	1419238_at	19520	-1.141	-0.2852	Yes
150	WASF2	1438683_at	19578	-1.156	-0.2813	Yes
151	CCNG2	1416488_at 1448364_at	19661	-1.184	-0.2783	Yes
152	DBI	1422432_at 1433991_x_at 1438093_x_at 1455976_x_at	19701	-1.197	-0.2733	Yes
153	SELK	1423225_at 1447909_s_at 1447910_x_at	19851	-1.255	-0.2730	Yes
154	WDR23	1448418_s_at 1460189_at	19903	-1.272	-0.2681	Yes
155	DDC	1426215_at 1430591_at 1445524_at	19928	-1.280	-0.2620	Yes
156	SESN2	1425139_at 1451599_at	20012	-1.324	-0.2583	Yes
157	CREBL1	1417173_at	20017	-1.326	-0.2509	Yes
158	DLEU2	1427410_at 1427411_s_at 1456145_at	20077	-1.357	-0.2459	Yes
159	SERTAD1	1417406_at	20122	-1.377	-0.2401	Yes
160	MAP3K13	1430137_at 1440749_at 1447699_at	20161	-1.392	-0.2340	Yes
161	RAD51L1	1421430_at 1430486_at 1439301_at 1442771_at 1446423_at 1447108_at 1459193_at	20167	-1.396	-0.2263	Yes
162	DNAJC4	1417934_at	20260	-1.439	-0.2223	Yes
163	RHOQ	1427918_a_at 1440925_at	20314	-1.470	-0.2164	Yes
164	RKHD3	1437152_at	20320	-1.473	-0.2083	Yes
165	ABAT	1433855_at	20498	-1.556	-0.2076	Yes
166	UVRAG	1454706_at	20697	-1.693	-0.2071	Yes
167	MEIS1	1440431_at 1443260_at 1445773_at 1450992_a_at 1459423_at 1459512_at	20752	-1.724	-0.1998	Yes
168	GNB2	1450623_at	20819	-1.771	-0.1927	Yes
169	PPP1R10	1426726_at 1426727_s_at 1430560_at	21011	-1.929	-0.1906	Yes
170	DHCR24	1418129_at 1451895_a_at	21040	-1.947	-0.1808	Yes
171	ATP2A2	1416551_at 1427250_at 1427251_at 1437797_at 1443551_at 1452363_a_at 1458927_at	21047	-1.952	-0.1700	Yes
172	VPS29	1417659_at 1417660_s_at 1440641_at 1455302_at	21111	-2.002	-0.1615	Yes
173	USP21	1454034_a_at	21176	-2.045	-0.1528	Yes
174	OLFML3	1448475_at	21237	-2.095	-0.1437	Yes
175	DGKZ	1426738_at 1452169_a_at	21319	-2.198	-0.1349	Yes
176	HNRPR	1427129_a_at 1438807_at 1452030_a_at	21371	-2.275	-0.1244	Yes
177	MAZ	1427099_at	21388	-2.301	-0.1120	Yes
178	ACACA	1444810_at	21434	-2.374	-0.1006	Yes
179	TAF15	1419846_at 1438130_at 1453504_at	21511	-2.474	-0.0900	Yes
180	HRBL	1425362_at 1437642_at 1441347_at	21801	-3.548	-0.0832	Yes
181	RBM4	1416920_at 1437322_at 1455517_at	21909	-7.260	-0.0469	Yes
182	SLC25A4	1424562_a_at 1424563_at 1434897_a_at 1455069_x_at	21935	-8.460	0.0000	Yes