Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | Set_01_ATM_minus_versus_SCID.phenotype_ATM_minus_versus_SCID.cls #ATM_minus_versus_SCID |
| Phenotype | phenotype_ATM_minus_versus_SCID.cls#ATM_minus_versus_SCID |
| Upregulated in class | SCID |
| GeneSet | ATCMNTCCGY_UNKNOWN |
| Enrichment Score (ES) | -0.40728024 |
| Normalized Enrichment Score (NES) | -1.3347931 |
| Nominal p-value | 0.10089686 |
| FDR q-value | 0.805537 |
| FWER p-Value | 0.999 |
| PROBE | DESCRIPTION (from dataset) | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|---|
| 1 | HOXA9 | 1421579_at 1455626_at | 1454 | 1.658 | -0.0215 | No | ||
| 2 | NOTCH1 | 1418633_at 1418634_at | 2169 | 1.283 | -0.0193 | No | ||
| 3 | FOXJ3 | 1435362_at 1438220_at 1459055_at | 2390 | 1.196 | 0.0030 | No | ||
| 4 | TCF12 | 1421908_a_at 1427670_a_at 1438762_at 1439209_at 1439619_at 1443012_at 1444620_at 1445093_at 1445133_at 1457524_at 1458337_at | 2699 | 1.100 | 0.0187 | No | ||
| 5 | JMJD1A | 1426810_at | 2717 | 1.094 | 0.0476 | No | ||
| 6 | IL4I1 | 1419192_at | 3005 | 1.023 | 0.0622 | No | ||
| 7 | NUP62 | 1415925_a_at 1415926_at 1437612_at 1438917_x_at 1447905_x_at 1448150_at | 3366 | 0.950 | 0.0715 | No | ||
| 8 | UBE2D3 | 1423112_at 1423113_a_at 1423114_at 1450858_a_at 1450859_s_at 1455479_a_at 1455480_s_at | 3825 | 0.853 | 0.0737 | No | ||
| 9 | RBL1 | 1424156_at 1425166_at 1432604_at 1454293_at | 4106 | 0.799 | 0.0825 | No | ||
| 10 | AP1G1 | 1423388_at 1434081_at 1460658_at 1460712_s_at | 5488 | 0.567 | 0.0348 | No | ||
| 11 | COL4A5 | 1425475_at 1425476_at | 5907 | 0.512 | 0.0296 | No | ||
| 12 | JARID1A | 1437105_at 1437106_at 1441318_at 1444842_at 1445541_at 1452360_a_at | 6552 | 0.435 | 0.0120 | No | ||
| 13 | PAX6 | 1419271_at 1425960_s_at 1437816_at 1452526_a_at 1456342_at | 6898 | 0.397 | 0.0070 | No | ||
| 14 | ATF5 | 1425927_a_at | 7018 | 0.384 | 0.0119 | No | ||
| 15 | HOXD8 | 1431099_at 1433638_s_at | 9827 | 0.116 | -0.1132 | No | ||
| 16 | HIVEP3 | 1421150_at 1429134_at 1439660_at 1450132_at 1458802_at | 10371 | 0.070 | -0.1361 | No | ||
| 17 | TSC1 | 1422043_at 1439989_at 1455252_at | 11041 | 0.013 | -0.1663 | No | ||
| 18 | CLTC | 1419407_at 1439094_at 1440457_at 1454626_at | 11806 | -0.056 | -0.1996 | No | ||
| 19 | FBXO36 | 1419305_a_at 1449418_s_at | 12543 | -0.121 | -0.2300 | No | ||
| 20 | CALM2 | 1422414_a_at 1423807_a_at | 13402 | -0.200 | -0.2637 | No | ||
| 21 | UBC | 1420494_x_at 1425965_at 1425966_x_at 1432827_x_at 1437666_x_at 1454373_x_at | 13487 | -0.206 | -0.2620 | No | ||
| 22 | GABPB2 | 1440289_at 1440868_at 1443942_at 1453682_at 1455110_at | 14727 | -0.332 | -0.3096 | No | ||
| 23 | ATF4 | 1438992_x_at 1439258_at 1448135_at | 14772 | -0.338 | -0.3024 | No | ||
| 24 | COL4A6 | 1421006_at 1421007_at | 15210 | -0.386 | -0.3119 | No | ||
| 25 | STK35 | 1431107_at 1439802_at | 16528 | -0.550 | -0.3572 | No | ||
| 26 | CALM1 | 1417365_a_at 1417366_s_at 1433592_at 1454611_a_at 1455571_x_at | 17172 | -0.650 | -0.3690 | No | ||
| 27 | GSK3B | 1434439_at 1437001_at 1439931_at 1439949_at 1451020_at 1454958_at | 18012 | -0.801 | -0.3856 | Yes | ||
| 28 | ATAD2 | 1436174_at 1443146_at 1443229_at | 18049 | -0.808 | -0.3653 | Yes | ||
| 29 | SNRP70 | 1429009_at 1429010_at 1429011_x_at 1451104_a_at 1457047_at | 18499 | -0.920 | -0.3609 | Yes | ||
| 30 | SFRS7 | 1424033_at 1424883_s_at 1436871_at | 18695 | -0.964 | -0.3437 | Yes | ||
| 31 | UBE2B | 1423106_at 1423107_at 1430177_at 1439477_at 1460132_at | 19056 | -1.026 | -0.3324 | Yes | ||
| 32 | UBE2D2 | 1416475_at 1416476_a_at 1416477_at 1439655_at 1445885_at 1448356_at | 19318 | -1.083 | -0.3149 | Yes | ||
| 33 | CCNG2 | 1416488_at 1448364_at | 19661 | -1.184 | -0.2985 | Yes | ||
| 34 | CYP51A1 | 1422533_at 1422534_at 1426173_at 1450646_at | 19900 | -1.270 | -0.2750 | Yes | ||
| 35 | POGZ | 1434650_at 1454827_at 1455046_a_at 1457748_at | 20345 | -1.485 | -0.2550 | Yes | ||
| 36 | WBP2 | 1448121_at | 20686 | -1.684 | -0.2249 | Yes | ||
| 37 | GNB2 | 1450623_at | 20819 | -1.771 | -0.1830 | Yes | ||
| 38 | PPP1CC | 1440594_at | 21024 | -1.939 | -0.1398 | Yes | ||
| 39 | MBD6 | 1418375_at | 21287 | -2.164 | -0.0931 | Yes | ||
| 40 | JARID1C | 1426497_at 1426498_at 1441449_at 1441450_s_at 1444157_a_at 1444158_at 1457930_at | 21852 | -4.531 | 0.0038 | Yes |
