Dataset | Set_01_ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus_repos |
Phenotype | phenotype_ATM_minus_versus_ATM_plus.cls#ATM_minus_versus_ATM_plus_repos |
Upregulated in class | ATM_plus |
GeneSet | V$PR_Q2 |
Enrichment Score (ES) | -0.4152731 |
Normalized Enrichment Score (NES) | -1.6464723 |
Nominal p-value | 0.0 |
FDR q-value | 0.11953462 |
FWER p-Value | 0.334 |
PROBE | DESCRIPTION (from dataset) | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
---|---|---|---|---|---|---|---|---|
1 | NOTCH1 | 1418633_at 1418634_at | 108 | 7.277 | 0.0227 | No | ||
2 | MRPS18B | 1451164_a_at | 229 | 5.700 | 0.0389 | No | ||
3 | CDC42EP4 | 1416511_a_at 1436801_x_at | 281 | 5.326 | 0.0568 | No | ||
4 | TNNI1 | 1450813_a_at | 451 | 4.540 | 0.0663 | No | ||
5 | MT2A | 1428942_at | 962 | 3.236 | 0.0552 | No | ||
6 | MRPL14 | 1451307_at | 1134 | 2.982 | 0.0587 | No | ||
7 | NFIL3 | 1418932_at | 1135 | 2.978 | 0.0700 | No | ||
8 | SYP | 1448280_at 1456249_x_at | 1762 | 2.334 | 0.0501 | No | ||
9 | DLX1 | 1449470_at | 1826 | 2.279 | 0.0559 | No | ||
10 | PDHA2 | 1450962_at | 2234 | 1.990 | 0.0448 | No | ||
11 | AHSG | 1455093_a_at | 2516 | 1.829 | 0.0388 | No | ||
12 | RBMS3 | 1436937_at 1436938_at 1441680_at 1443204_at 1446047_at | 2633 | 1.775 | 0.0403 | No | ||
13 | CDH6 | 1450288_at | 3483 | 1.479 | 0.0069 | No | ||
14 | OBSCN | 1443632_at | 3542 | 1.461 | 0.0098 | No | ||
15 | KCNK3 | 1425341_at 1425342_a_at 1426058_a_at | 3737 | 1.397 | 0.0062 | No | ||
16 | HMGCS1 | 1433443_a_at 1433444_at 1433445_x_at 1433446_at 1441536_at | 4158 | 1.296 | -0.0082 | No | ||
17 | KCNIP1 | 1416785_at 1433156_at 1448459_at 1454504_at | 4166 | 1.294 | -0.0036 | No | ||
18 | CTGF | 1416953_at | 4338 | 1.260 | -0.0067 | No | ||
19 | KCNJ1 | 1418613_at 1418614_at | 4472 | 1.236 | -0.0081 | No | ||
20 | OTP | 1422285_at | 4483 | 1.234 | -0.0038 | No | ||
21 | RNF128 | 1418318_at 1449036_at | 4517 | 1.228 | -0.0007 | No | ||
22 | BMP10 | 1421763_at | 4520 | 1.228 | 0.0039 | No | ||
23 | LOX | 1416121_at 1437903_at 1448228_at | 4610 | 1.210 | 0.0044 | No | ||
24 | RHEBL1 | 1447818_x_at 1451516_at | 4737 | 1.184 | 0.0031 | No | ||
25 | FMO1 | 1417429_at | 4770 | 1.177 | 0.0061 | No | ||
26 | GRM3 | 1430136_at | 5105 | 1.115 | -0.0050 | No | ||
27 | NR2F1 | 1418157_at 1422412_x_at | 5170 | 1.105 | -0.0037 | No | ||
28 | SRGAP1 | 1431719_a_at | 5319 | 1.078 | -0.0064 | No | ||
29 | APBA2BP | 1431946_a_at 1447907_x_at | 5380 | 1.068 | -0.0051 | No | ||
30 | HMGN2 | 1433507_a_at | 5478 | 1.051 | -0.0056 | No | ||
31 | PARC | 1427620_at 1439866_at | 5585 | 1.039 | -0.0065 | No | ||
32 | PDE4D | 1443289_at 1458212_at 1459289_at 1459311_at | 5743 | 1.017 | -0.0098 | No | ||
33 | RWDD1 | 1427913_at 1430242_at 1454241_at | 5884 | 1.001 | -0.0125 | No | ||
34 | CAPN6 | 1421952_at 1450429_at | 5895 | 0.999 | -0.0091 | No | ||
35 | RAB30 | 1426452_a_at | 5946 | 0.994 | -0.0076 | No | ||
36 | GIPC2 | 1417178_at 1457330_at | 5967 | 0.991 | -0.0048 | No | ||
37 | PDZRN4 | 1456512_at | 6173 | 0.961 | -0.0105 | No | ||
38 | RGS3 | 1425701_a_at 1427648_at 1449516_a_at 1454026_a_at | 6188 | 0.959 | -0.0075 | No | ||
39 | JPH1 | 1421520_at 1438428_at | 6218 | 0.955 | -0.0052 | No | ||
40 | ELOVL6 | 1417403_at 1417404_at 1445062_at 1445578_at 1445641_at | 6282 | 0.944 | -0.0045 | No | ||
41 | FOXA1 | 1418496_at | 6383 | 0.930 | -0.0056 | No | ||
42 | ZDHHC22 | 1459723_at | 6406 | 0.927 | -0.0031 | No | ||
43 | EYA2 | 1424127_at 1445755_at | 6410 | 0.926 | 0.0003 | No | ||
44 | WNT8B | 1421439_at | 6413 | 0.925 | 0.0037 | No | ||
45 | JDP2 | 1424972_at 1450350_a_at | 6589 | 0.899 | -0.0009 | No | ||
46 | HFE | 1422645_at 1450702_at | 6663 | 0.890 | -0.0009 | No | ||
47 | RAB39 | 1437762_at | 6742 | 0.879 | -0.0011 | No | ||
48 | KCNC1 | 1423559_at 1443855_at 1456944_at | 6806 | 0.869 | -0.0007 | No | ||
49 | FILIP1 | 1436650_at 1444075_at | 7124 | 0.823 | -0.0121 | No | ||
50 | IRX4 | 1419539_at | 7306 | 0.799 | -0.0174 | No | ||
51 | PDGFRA | 1421916_at 1421917_at 1438946_at | 7628 | 0.758 | -0.0293 | No | ||
52 | WNT9A | 1425889_at 1436978_at | 7629 | 0.758 | -0.0264 | No | ||
53 | PDC | 1449179_at | 8082 | 0.698 | -0.0445 | No | ||
54 | GRIA3 | 1420563_at 1434728_at | 8160 | 0.687 | -0.0454 | No | ||
55 | SOX5 | 1423500_a_at 1432189_a_at 1432190_at 1440827_x_at 1446461_at 1452511_at 1459261_at | 8288 | 0.671 | -0.0487 | No | ||
56 | HAPLN2 | 1420962_at 1420963_at | 8356 | 0.662 | -0.0493 | No | ||
57 | SIX4 | 1425767_a_at 1427701_a_at 1439753_x_at 1456862_at | 8753 | 0.615 | -0.0651 | No | ||
58 | USP54 | 1428731_at | 8769 | 0.614 | -0.0635 | No | ||
59 | CAMLG | 1417842_at | 9007 | 0.586 | -0.0721 | No | ||
60 | CHST9 | 1431897_at | 9356 | 0.544 | -0.0861 | No | ||
61 | SEMA3A | 1420416_at 1420417_at 1449865_at | 9379 | 0.541 | -0.0850 | No | ||
62 | ONECUT1 | 1421447_at 1450252_at 1456974_at | 9665 | 0.508 | -0.0962 | No | ||
63 | PRRX1 | 1425526_a_at 1425527_at 1425528_at 1432129_a_at 1439774_at 1458004_at | 9725 | 0.501 | -0.0970 | No | ||
64 | GABRA1 | 1421280_at 1421281_at 1436889_at 1455766_at | 9875 | 0.485 | -0.1020 | No | ||
65 | BMPR2 | 1419616_at 1434310_at 1441652_at | 9955 | 0.474 | -0.1038 | No | ||
66 | CACNA1G | 1423365_at | 9985 | 0.472 | -0.1034 | No | ||
67 | LRRTM4 | 1437214_at 1455937_at | 10181 | 0.451 | -0.1106 | No | ||
68 | CACNA2D2 | 1426185_at | 10233 | 0.445 | -0.1113 | No | ||
69 | CLDN10 | 1426147_s_at | 10315 | 0.438 | -0.1133 | No | ||
70 | FCHSD2 | 1434260_at 1456949_at | 10608 | 0.407 | -0.1252 | No | ||
71 | WNT3 | 1450763_x_at | 10796 | 0.385 | -0.1323 | No | ||
72 | FGF10 | 1420690_at | 10913 | 0.371 | -0.1362 | No | ||
73 | UBE3A | 1416680_at 1416681_at 1416682_at 1425206_a_at 1431224_at 1445727_at | 11133 | 0.347 | -0.1450 | No | ||
74 | SMPX | 1418095_at | 11189 | 0.341 | -0.1462 | No | ||
75 | HOXA5 | 1443803_x_at 1448926_at | 11385 | 0.318 | -0.1540 | No | ||
76 | WWP2 | 1438482_at 1442162_at 1448145_at 1448146_at 1456714_at 1457499_at | 11487 | 0.304 | -0.1574 | No | ||
77 | SERPINB12 | 1429297_at 1432173_at | 11919 | 0.258 | -0.1763 | No | ||
78 | NR4A3 | 1421079_at 1421080_at | 12109 | 0.240 | -0.1840 | No | ||
79 | GRIN2B | 1422223_at 1431700_at | 12124 | 0.239 | -0.1838 | No | ||
80 | GRM2 | 1431344_at 1435607_at | 12246 | 0.227 | -0.1885 | No | ||
81 | DLX2 | 1448877_at | 12359 | 0.214 | -0.1928 | No | ||
82 | IL23A | 1419529_at | 12481 | 0.201 | -0.1976 | No | ||
83 | SLC15A2 | 1417600_at 1424730_a_at 1447808_s_at | 12805 | 0.164 | -0.2118 | No | ||
84 | NEXN | 1435649_at 1446084_at | 12923 | 0.150 | -0.2166 | No | ||
85 | VGF | 1436094_at | 13159 | 0.123 | -0.2270 | No | ||
86 | ZFHX1B | 1422748_at 1434298_at 1442393_at 1445518_at 1454200_at 1456389_at | 13171 | 0.121 | -0.2270 | No | ||
87 | PRDX6 | 1423223_a_at 1442878_at | 13203 | 0.118 | -0.2280 | No | ||
88 | TNMD | 1417979_at | 13245 | 0.113 | -0.2294 | No | ||
89 | WNT2 | 1449425_at | 13498 | 0.081 | -0.2407 | No | ||
90 | OPTC | 1420578_at 1457138_x_at | 13505 | 0.081 | -0.2407 | No | ||
91 | DTNA | 1419223_a_at 1425292_at 1426066_a_at 1427588_a_at 1429768_at 1447280_at 1456069_at 1458908_at | 13612 | 0.068 | -0.2453 | No | ||
92 | LEMD1 | 1445642_at | 13742 | 0.047 | -0.2510 | No | ||
93 | NEK9 | 1424094_at 1460744_at | 13868 | 0.031 | -0.2567 | No | ||
94 | NNAT | 1423506_a_at | 13913 | 0.025 | -0.2586 | No | ||
95 | RGN | 1448852_at | 14013 | 0.013 | -0.2631 | No | ||
96 | SCD | 1415964_at 1415965_at | 14196 | -0.013 | -0.2714 | No | ||
97 | FGD4 | 1425037_at 1426041_a_at 1426042_at 1451659_at 1455337_at | 14229 | -0.018 | -0.2728 | No | ||
98 | BHLHB5 | 1418271_at | 14254 | -0.022 | -0.2738 | No | ||
99 | IL1RAPL1 | 1445821_at 1458964_at | 14354 | -0.036 | -0.2783 | No | ||
100 | BDNF | 1422168_a_at 1422169_a_at | 14372 | -0.039 | -0.2789 | No | ||
101 | PAX3 | 1420389_at 1430335_a_at 1441743_at 1459148_at | 14382 | -0.040 | -0.2791 | No | ||
102 | IL1A | 1421473_at | 14640 | -0.081 | -0.2906 | No | ||
103 | SCNN1A | 1425088_at | 14696 | -0.089 | -0.2928 | No | ||
104 | CD24 | 1416034_at 1437502_x_at 1448182_a_at | 14737 | -0.094 | -0.2943 | No | ||
105 | HOXB8 | 1452493_s_at | 14801 | -0.104 | -0.2968 | No | ||
106 | CNTN4 | 1438782_at 1460321_at | 14932 | -0.126 | -0.3023 | No | ||
107 | RCN1 | 1417090_at 1447890_at | 15027 | -0.142 | -0.3061 | No | ||
108 | FOXC1 | 1419485_at 1419486_at | 15213 | -0.172 | -0.3139 | No | ||
109 | TYRO3 | 1425248_a_at 1425249_a_at | 15300 | -0.185 | -0.3172 | No | ||
110 | CTDSPL | 1422510_at | 15309 | -0.187 | -0.3168 | No | ||
111 | MAP4K5 | 1427083_a_at 1427084_a_at 1427376_a_at 1440059_at 1445426_at 1446348_at 1447204_at | 15348 | -0.195 | -0.3178 | No | ||
112 | GPM6A | 1426442_at 1456741_s_at 1459303_at | 15422 | -0.206 | -0.3204 | No | ||
113 | OTX1 | 1437601_at | 15758 | -0.273 | -0.3348 | No | ||
114 | TCF12 | 1421908_a_at 1427670_a_at 1438762_at 1439209_at 1439619_at 1443012_at 1444620_at 1445093_at 1445133_at 1457524_at 1458337_at | 15793 | -0.280 | -0.3353 | No | ||
115 | SHH | 1427571_at 1436869_at | 16016 | -0.327 | -0.3442 | No | ||
116 | PANK1 | 1418715_at 1429813_at 1429814_at 1431028_a_at 1457110_at | 16221 | -0.374 | -0.3522 | No | ||
117 | NCDN | 1416852_a_at 1416853_at | 16724 | -0.506 | -0.3733 | No | ||
118 | BRD4 | 1424922_a_at 1440078_at 1450711_at 1451870_a_at 1458708_at | 16859 | -0.547 | -0.3774 | No | ||
119 | PPP2R3A | 1455198_a_at | 16897 | -0.561 | -0.3770 | No | ||
120 | DTX2 | 1421720_a_at 1439429_x_at | 17000 | -0.595 | -0.3794 | No | ||
121 | ZNRF2 | 1431154_at 1434016_at 1434017_at 1444735_at 1455290_at 1455291_s_at | 17008 | -0.596 | -0.3775 | No | ||
122 | GPM6B | 1423091_a_at 1425942_a_at 1453514_at | 17102 | -0.625 | -0.3794 | No | ||
123 | NARG2 | 1426536_at 1426537_at | 17193 | -0.658 | -0.3810 | No | ||
124 | ADCY3 | 1421959_s_at 1421960_at 1436928_s_at 1436929_x_at 1440405_at 1444641_at | 17279 | -0.688 | -0.3823 | No | ||
125 | DGKH | 1457213_a_at 1459906_at | 17380 | -0.729 | -0.3841 | No | ||
126 | TSGA10 | 1436045_at 1447283_at | 17397 | -0.735 | -0.3820 | No | ||
127 | ITGBL1 | 1425039_at | 17452 | -0.759 | -0.3816 | No | ||
128 | JMJD1C | 1426900_at 1439998_at 1441592_at 1448049_at 1458521_at | 17549 | -0.798 | -0.3830 | No | ||
129 | BACE2 | 1416673_at 1435581_at 1437846_x_at 1438645_x_at | 17634 | -0.833 | -0.3837 | No | ||
130 | POLD4 | 1427885_at | 17789 | -0.900 | -0.3873 | No | ||
131 | MCC | 1438081_at 1442741_at 1442892_at 1459524_at 1459752_at | 17890 | -0.944 | -0.3884 | No | ||
132 | RAB3C | 1432415_at 1432432_a_at 1449494_at | 17910 | -0.952 | -0.3856 | No | ||
133 | SH3BP4 | 1416305_at 1455250_at | 18132 | -1.020 | -0.3919 | No | ||
134 | RAB1B | 1424064_at | 18323 | -1.089 | -0.3965 | No | ||
135 | PRKAG1 | 1417690_at 1433533_x_at 1457803_at | 18359 | -1.102 | -0.3939 | No | ||
136 | EPHA2 | 1421151_a_at | 18439 | -1.140 | -0.3932 | No | ||
137 | ELMO1 | 1424523_at 1446610_at 1450208_a_at | 18527 | -1.182 | -0.3927 | No | ||
138 | SNAPC1 | 1429335_at | 18678 | -1.249 | -0.3948 | No | ||
139 | LBX1 | 1422323_a_at 1427400_at | 18763 | -1.297 | -0.3937 | No | ||
140 | TCN2 | 1441850_x_at 1444110_at 1447800_x_at 1447842_x_at 1448200_at 1457825_x_at | 18813 | -1.331 | -0.3909 | No | ||
141 | ESRRA | 1442864_at 1460652_at | 18992 | -1.427 | -0.3937 | No | ||
142 | BCL9 | 1445859_at 1446767_at 1451574_at 1455565_at | 19293 | -1.622 | -0.4013 | No | ||
143 | CXCL14 | 1418456_a_at 1418457_at | 19598 | -1.869 | -0.4082 | Yes | ||
144 | PICALM | 1441328_at 1443218_at 1446968_at 1451316_a_at 1455773_at | 19635 | -1.899 | -0.4026 | Yes | ||
145 | STIM1 | 1436945_x_at 1448320_at 1458460_at | 19722 | -1.973 | -0.3990 | Yes | ||
146 | LTBP3 | 1418049_at 1437833_at 1438312_s_at 1456189_x_at | 19767 | -2.001 | -0.3934 | Yes | ||
147 | SESN3 | 1449303_at 1453313_at | 19865 | -2.061 | -0.3901 | Yes | ||
148 | MAP2K1IP1 | 1416272_at | 19918 | -2.100 | -0.3845 | Yes | ||
149 | PGM2L1 | 1438774_s_at 1452841_at 1456478_at | 19982 | -2.161 | -0.3791 | Yes | ||
150 | CXCR4 | 1448710_at | 20095 | -2.256 | -0.3757 | Yes | ||
151 | ZDHHC5 | 1426310_at 1426311_s_at | 20096 | -2.257 | -0.3671 | Yes | ||
152 | CNOT2 | 1436980_x_at 1445017_at 1447212_at 1454602_s_at 1454603_a_at 1456576_x_at | 20097 | -2.257 | -0.3585 | Yes | ||
153 | CPEB4 | 1420617_at 1420618_at 1449931_at | 20126 | -2.293 | -0.3511 | Yes | ||
154 | PPP2R2A | 1429715_at 1437730_at 1453260_a_at | 20200 | -2.367 | -0.3454 | Yes | ||
155 | TMEM24 | 1428095_a_at 1457585_at | 20287 | -2.457 | -0.3400 | Yes | ||
156 | ATOH7 | 1422929_s_at 1450796_at | 20503 | -2.735 | -0.3395 | Yes | ||
157 | CD96 | 1419226_at | 20533 | -2.776 | -0.3303 | Yes | ||
158 | PRG2 | 1422873_at | 20545 | -2.803 | -0.3201 | Yes | ||
159 | PON2 | 1425791_at 1429019_s_at 1429020_at 1450686_at | 20556 | -2.819 | -0.3098 | Yes | ||
160 | AMY2A | 1457367_at | 20632 | -2.926 | -0.3021 | Yes | ||
161 | RERE | 1454670_at | 20895 | -3.377 | -0.3013 | Yes | ||
162 | NUTF2 | 1434367_s_at 1447440_at 1449017_at | 20898 | -3.385 | -0.2886 | Yes | ||
163 | TAGAP | 1460453_at | 21047 | -3.692 | -0.2813 | Yes | ||
164 | SSH2 | 1456153_at | 21088 | -3.758 | -0.2688 | Yes | ||
165 | KLF3 | 1421604_a_at 1429360_at 1431630_a_at 1441200_at 1442920_at 1454666_at | 21160 | -3.923 | -0.2572 | Yes | ||
166 | CPNE1 | 1433439_at | 21177 | -3.969 | -0.2428 | Yes | ||
167 | H2AFZ | 1441370_at | 21198 | -4.032 | -0.2284 | Yes | ||
168 | UVRAG | 1454706_at | 21209 | -4.054 | -0.2134 | Yes | ||
169 | USP52 | 1426700_a_at | 21235 | -4.128 | -0.1989 | Yes | ||
170 | PPP1R10 | 1426726_at 1426727_s_at 1430560_at | 21251 | -4.166 | -0.1837 | Yes | ||
171 | CACNB3 | 1448656_at | 21292 | -4.298 | -0.1692 | Yes | ||
172 | MXI1 | 1425732_a_at 1450376_at | 21325 | -4.477 | -0.1536 | Yes | ||
173 | RGL2 | 1450688_at | 21366 | -4.619 | -0.1379 | Yes | ||
174 | HIVEP1 | 1422742_at | 21472 | -5.027 | -0.1236 | Yes | ||
175 | ZBTB9 | 1429125_at | 21496 | -5.138 | -0.1051 | Yes | ||
176 | GRAP | 1429387_at | 21598 | -5.745 | -0.0878 | Yes | ||
177 | PACS1 | 1420112_at 1435762_at 1440014_at 1449737_at 1459707_at | 21651 | -6.122 | -0.0669 | Yes | ||
178 | RAP2B | 1417914_at 1417915_at 1439548_at 1448885_at | 21680 | -6.376 | -0.0440 | Yes | ||
179 | SSBP2 | 1429951_at 1438423_at 1449815_a_at 1451542_at | 21731 | -6.802 | -0.0204 | Yes | ||
180 | CDKN1B | 1419497_at 1434045_at | 21856 | -7.819 | 0.0037 | Yes |