Dataset | Set_01_ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus_repos |
Phenotype | phenotype_ATM_minus_versus_ATM_plus.cls#ATM_minus_versus_ATM_plus_repos |
Upregulated in class | ATM_minus |
GeneSet | V$MYCMAX_01 |
Enrichment Score (ES) | 0.3632418 |
Normalized Enrichment Score (NES) | 1.4758794 |
Nominal p-value | 0.003875969 |
FDR q-value | 0.07843562 |
FWER p-Value | 0.931 |
PROBE | DESCRIPTION (from dataset) | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
---|---|---|---|---|---|---|---|---|
1 | MTHFD1 | 1415916_a_at 1415917_at 1436704_x_at | 30 | 9.067 | 0.0261 | Yes | ||
2 | TCERG1 | 1421033_a_at 1434434_s_at 1450100_a_at | 56 | 8.768 | 0.0516 | Yes | ||
3 | LYAR | 1417511_at | 114 | 7.118 | 0.0706 | Yes | ||
4 | SDC1 | 1415943_at 1415944_at 1437279_x_at 1448158_at | 152 | 6.595 | 0.0889 | Yes | ||
5 | LAP3 | 1450860_at | 168 | 6.388 | 0.1076 | Yes | ||
6 | CAD | 1440857_at 1452829_at 1452830_s_at | 172 | 6.309 | 0.1267 | Yes | ||
7 | IFRD2 | 1451016_at | 191 | 6.028 | 0.1441 | Yes | ||
8 | QTRT1 | 1450630_at | 269 | 5.389 | 0.1569 | Yes | ||
9 | TIMM10 | 1417499_at | 292 | 5.234 | 0.1718 | Yes | ||
10 | HNRPA1 | 1423531_a_at 1430020_x_at 1436549_a_at 1442758_at 1446038_at 1455305_x_at 1455740_at | 358 | 4.955 | 0.1839 | Yes | ||
11 | HMGA1 | 1416184_s_at | 362 | 4.933 | 0.1987 | Yes | ||
12 | RANBP1 | 1422547_at | 415 | 4.703 | 0.2106 | Yes | ||
13 | NUDC | 1419471_a_at | 435 | 4.604 | 0.2237 | Yes | ||
14 | PUS1 | 1418869_a_at | 466 | 4.468 | 0.2359 | Yes | ||
15 | PPAT | 1428543_at 1441770_at 1452831_s_at | 473 | 4.443 | 0.2491 | Yes | ||
16 | PRPS1 | 1416052_at | 485 | 4.410 | 0.2620 | Yes | ||
17 | IVNS1ABP | 1420961_a_at 1425718_a_at 1450084_s_at | 497 | 4.357 | 0.2747 | Yes | ||
18 | SLC12A5 | 1425337_at 1445933_at 1451674_at | 582 | 4.091 | 0.2833 | Yes | ||
19 | NOL5A | 1426533_at 1455035_s_at | 614 | 3.987 | 0.2940 | Yes | ||
20 | RCL1 | 1416730_at 1457992_at | 655 | 3.901 | 0.3040 | Yes | ||
21 | G6PC3 | 1428245_at | 746 | 3.667 | 0.3110 | Yes | ||
22 | ATAD3A | 1422461_at 1437343_x_at 1438178_x_at 1456541_x_at | 788 | 3.574 | 0.3199 | Yes | ||
23 | PTGES2 | 1417591_at | 801 | 3.548 | 0.3302 | Yes | ||
24 | ACY1 | 1419173_at | 950 | 3.252 | 0.3332 | Yes | ||
25 | MRPL40 | 1448849_at | 1162 | 2.949 | 0.3325 | Yes | ||
26 | SNX5 | 1417646_a_at 1417647_at 1417648_s_at 1437074_at 1448791_at | 1279 | 2.818 | 0.3357 | Yes | ||
27 | RCOR2 | 1417302_at | 1290 | 2.804 | 0.3438 | Yes | ||
28 | PSME3 | 1418078_at 1418079_at 1438509_at | 1682 | 2.402 | 0.3331 | Yes | ||
29 | PPRC1 | 1426381_at | 1717 | 2.370 | 0.3387 | Yes | ||
30 | EEF1B2 | 1448252_a_at | 1887 | 2.231 | 0.3377 | Yes | ||
31 | TIMM9 | 1428010_at 1449886_a_at | 1961 | 2.174 | 0.3410 | Yes | ||
32 | BCL7C | 1440906_at 1443898_at 1446516_at 1447139_at 1449523_at | 2019 | 2.134 | 0.3448 | Yes | ||
33 | CGREF1 | 1424528_at 1424529_s_at | 2076 | 2.092 | 0.3486 | Yes | ||
34 | RPS19 | 1449243_a_at 1460442_at | 2085 | 2.085 | 0.3546 | Yes | ||
35 | FGF6 | 1427582_at | 2200 | 2.007 | 0.3554 | Yes | ||
36 | NCL | 1415771_at 1415772_at 1415773_at 1442404_at 1456528_x_at | 2565 | 1.803 | 0.3441 | Yes | ||
37 | FOXD3 | 1422210_at | 2613 | 1.783 | 0.3474 | Yes | ||
38 | CEBPA | 1418982_at | 2666 | 1.762 | 0.3504 | Yes | ||
39 | HIRA | 1436241_s_at 1450049_a_at 1450050_at 1459103_at | 2681 | 1.757 | 0.3550 | Yes | ||
40 | TGFB2 | 1423250_a_at 1438303_at 1446141_at 1450922_a_at 1450923_at | 2731 | 1.738 | 0.3581 | Yes | ||
41 | ENO3 | 1417951_at 1449631_at | 3066 | 1.617 | 0.3476 | Yes | ||
42 | OPRS1 | 1416750_at 1435579_at 1440792_x_at 1451956_a_at 1457324_at | 3077 | 1.613 | 0.3521 | Yes | ||
43 | SUCLG2 | 1427441_a_at 1435841_s_at 1444309_at | 3322 | 1.533 | 0.3455 | Yes | ||
44 | HTF9C | 1434244_x_at 1441920_x_at 1448114_a_at 1448115_at 1453995_a_at 1457620_at | 3356 | 1.524 | 0.3486 | Yes | ||
45 | ZBTB10 | 1458695_at | 3406 | 1.507 | 0.3509 | Yes | ||
46 | ILF3 | 1422546_at 1436802_at 1460669_at | 3451 | 1.494 | 0.3534 | Yes | ||
47 | BCAS3 | 1423528_at 1428454_at 1457817_at 1458557_at | 3472 | 1.482 | 0.3570 | Yes | ||
48 | ADAMTS19 | 1442459_at 1446513_at | 3539 | 1.462 | 0.3584 | Yes | ||
49 | SRP72 | 1428876_at 1428877_at | 3700 | 1.410 | 0.3554 | Yes | ||
50 | LRP8 | 1421459_a_at 1440882_at 1442347_at | 3770 | 1.389 | 0.3564 | Yes | ||
51 | NDUFS1 | 1425143_a_at 1453354_at | 3836 | 1.373 | 0.3576 | Yes | ||
52 | SATB2 | 1425904_at 1427017_at | 3891 | 1.359 | 0.3592 | Yes | ||
53 | RUNX2 | 1424704_at 1425389_a_at 1426034_a_at | 3949 | 1.347 | 0.3607 | Yes | ||
54 | PRDX4 | 1416166_a_at 1416167_at 1431269_at | 4027 | 1.327 | 0.3612 | Yes | ||
55 | KCTD15 | 1435339_at | 4070 | 1.314 | 0.3632 | Yes | ||
56 | IQGAP2 | 1433885_at 1459894_at | 4578 | 1.217 | 0.3436 | No | ||
57 | PITX3 | 1449917_at | 4660 | 1.200 | 0.3435 | No | ||
58 | RTN4RL2 | 1439573_at | 4685 | 1.195 | 0.3461 | No | ||
59 | RHEBL1 | 1447818_x_at 1451516_at | 4737 | 1.184 | 0.3473 | No | ||
60 | COL2A1 | 1450567_a_at | 4763 | 1.179 | 0.3498 | No | ||
61 | STMN1 | 1415849_s_at | 4840 | 1.165 | 0.3498 | No | ||
62 | SCRT2 | 1440930_a_at 1440931_at 1446986_at 1457310_x_at | 4977 | 1.136 | 0.3470 | No | ||
63 | BOK | 1417040_a_at | 4978 | 1.136 | 0.3504 | No | ||
64 | PTMA | 1423455_at | 5264 | 1.088 | 0.3406 | No | ||
65 | PCDHA10 | 1427687_at | 5368 | 1.069 | 0.3392 | No | ||
66 | FKBP11 | 1417267_s_at 1425839_at 1425938_a_at | 5527 | 1.046 | 0.3351 | No | ||
67 | HNRPDL | 1420093_s_at 1420094_at 1424251_a_at 1424252_at 1428224_at 1428225_s_at 1449039_a_at 1456698_s_at | 5589 | 1.039 | 0.3354 | No | ||
68 | NRIP3 | 1418104_at 1431597_a_at 1448954_at | 5835 | 1.005 | 0.3272 | No | ||
69 | RFX4 | 1432053_at 1436931_at 1443312_at | 5968 | 0.991 | 0.3241 | No | ||
70 | EIF2C2 | 1426366_at 1438043_at | 6004 | 0.986 | 0.3255 | No | ||
71 | EFNB1 | 1418285_at 1418286_a_at 1451591_a_at | 6029 | 0.983 | 0.3274 | No | ||
72 | HOXA11 | 1420414_at | 6043 | 0.981 | 0.3298 | No | ||
73 | GJA1 | 1415800_at 1415801_at 1437992_x_at 1438650_x_at 1438945_x_at 1438973_x_at | 6078 | 0.976 | 0.3312 | No | ||
74 | TFRC | 1422966_a_at 1422967_a_at 1452661_at AFFX-TransRecMur/X57349_3_at AFFX-TransRecMur/X57349_5_at AFFX-TransRecMur/X57349_M_at | 6519 | 0.911 | 0.3137 | No | ||
75 | HHIP | 1421426_at 1437933_at 1438083_at 1455277_at | 6667 | 0.890 | 0.3097 | No | ||
76 | OPRD1 | 1422121_at | 7100 | 0.826 | 0.2923 | No | ||
77 | POU3F2 | 1450831_at 1453478_at 1457734_at | 7303 | 0.799 | 0.2855 | No | ||
78 | KIAA0427 | 1427743_at 1436047_at | 7325 | 0.796 | 0.2869 | No | ||
79 | RAI14 | 1417400_at 1417401_at 1441030_at 1444777_at | 7392 | 0.789 | 0.2863 | No | ||
80 | BMP4 | 1422912_at | 7609 | 0.761 | 0.2787 | No | ||
81 | LIN28 | 1437752_at | 7823 | 0.734 | 0.2711 | No | ||
82 | KRTCAP2 | 1417058_a_at 1417059_at | 8074 | 0.699 | 0.2617 | No | ||
83 | APOA5 | 1417610_at | 8108 | 0.694 | 0.2623 | No | ||
84 | NTN2L | 1422056_at | 8110 | 0.694 | 0.2644 | No | ||
85 | MPP3 | 1419077_at 1459611_at | 8113 | 0.693 | 0.2664 | No | ||
86 | DNAJB5 | 1421961_a_at 1421962_at 1450436_s_at | 8216 | 0.680 | 0.2638 | No | ||
87 | CLN3 | 1417551_at 1457789_at | 8701 | 0.620 | 0.2434 | No | ||
88 | DAZL | 1419542_at 1449502_at | 8776 | 0.613 | 0.2419 | No | ||
89 | CNNM1 | 1420354_at 1441312_at 1445979_at | 8951 | 0.592 | 0.2357 | No | ||
90 | ETV4 | 1423232_at 1443381_at | 9032 | 0.583 | 0.2337 | No | ||
91 | SYT3 | 1417708_at | 9239 | 0.558 | 0.2260 | No | ||
92 | SLC1A7 | 1456971_at | 9565 | 0.520 | 0.2126 | No | ||
93 | KCNQ5 | 1427426_at 1441071_at | 9835 | 0.489 | 0.2017 | No | ||
94 | HOXB5 | 1418415_at | 10060 | 0.462 | 0.1928 | No | ||
95 | SNCAIP | 1423499_at 1430463_a_at 1441037_at | 10081 | 0.459 | 0.1933 | No | ||
96 | NEUROD1 | 1426412_at 1426413_at | 10141 | 0.454 | 0.1920 | No | ||
97 | IPO13 | 1433464_at | 10344 | 0.435 | 0.1840 | No | ||
98 | ETV1 | 1422607_at 1445314_at 1450684_at | 10374 | 0.431 | 0.1840 | No | ||
99 | GADD45G | 1453851_a_at | 10515 | 0.417 | 0.1788 | No | ||
100 | GPRC5C | 1424450_at 1452947_at | 10738 | 0.391 | 0.1698 | No | ||
101 | DAZAP1 | 1419275_at | 10877 | 0.375 | 0.1646 | No | ||
102 | MEOX2 | 1424233_at 1424234_s_at | 10976 | 0.363 | 0.1612 | No | ||
103 | RPS6KA5 | 1431050_at 1437625_at 1439004_at 1440343_at | 11230 | 0.336 | 0.1506 | No | ||
104 | ELAVL3 | 1452524_a_at | 11501 | 0.304 | 0.1391 | No | ||
105 | TUBA4 | 1417373_a_at 1417374_at 1417375_at | 11580 | 0.296 | 0.1364 | No | ||
106 | SFXN2 | 1439966_x_at 1440786_x_at | 11946 | 0.256 | 0.1204 | No | ||
107 | USP15 | 1436891_at 1446186_at 1454036_a_at 1455842_x_at | 12148 | 0.236 | 0.1119 | No | ||
108 | SLC6A15 | 1426712_at | 12269 | 0.225 | 0.1070 | No | ||
109 | UBXD3 | 1426007_a_at 1451906_at 1456385_x_at 1457581_at | 12419 | 0.208 | 0.1008 | No | ||
110 | NPM1 | 1415839_a_at 1420267_at 1420268_x_at 1420269_at 1432416_a_at | 12454 | 0.203 | 0.0999 | No | ||
111 | PPP1R9B | 1447247_at 1447486_at | 12746 | 0.170 | 0.0870 | No | ||
112 | FLT3 | 1419538_at | 12825 | 0.162 | 0.0839 | No | ||
113 | PPARGC1B | 1438775_at 1449945_at 1457578_at | 13175 | 0.121 | 0.0682 | No | ||
114 | MAT2A | 1423667_at 1433576_at 1438386_x_at 1438630_x_at 1438976_x_at 1439386_x_at 1456702_x_at | 13252 | 0.111 | 0.0651 | No | ||
115 | TRIB1 | 1424880_at 1424881_at | 13451 | 0.088 | 0.0563 | No | ||
116 | ABCA1 | 1421839_at 1421840_at 1450392_at | 13514 | 0.080 | 0.0536 | No | ||
117 | U2AF2 | 1417260_at | 13532 | 0.077 | 0.0531 | No | ||
118 | DIABLO | 1417683_at 1425768_at | 13592 | 0.070 | 0.0506 | No | ||
119 | NR6A1 | 1421515_at 1421516_at 1428825_at 1428826_at 1445872_at | 14040 | 0.010 | 0.0301 | No | ||
120 | TRIM46 | 1460568_at | 14247 | -0.021 | 0.0207 | No | ||
121 | KCMF1 | 1418694_at 1418695_a_at 1449180_at | 14571 | -0.070 | 0.0060 | No | ||
122 | GIT1 | 1454759_at | 14646 | -0.082 | 0.0029 | No | ||
123 | ATOH8 | 1426418_at | 14717 | -0.092 | -0.0001 | No | ||
124 | FOXJ3 | 1435362_at 1438220_at 1459055_at | 14995 | -0.136 | -0.0124 | No | ||
125 | RAMP2 | 1418187_at | 15016 | -0.140 | -0.0129 | No | ||
126 | EWSR1 | 1417238_at 1425919_at 1436884_x_at 1441074_at 1456461_at | 15185 | -0.167 | -0.0201 | No | ||
127 | CDC14A | 1436913_at 1443184_at 1446493_at 1459517_at | 15251 | -0.177 | -0.0225 | No | ||
128 | CHRM1 | 1439611_at 1450833_at | 15268 | -0.181 | -0.0227 | No | ||
129 | HSPBAP1 | 1428566_at 1428567_at 1441900_x_at 1442842_at | 15416 | -0.205 | -0.0289 | No | ||
130 | ZADH2 | 1451277_at | 15439 | -0.210 | -0.0292 | No | ||
131 | RAB3IL1 | 1419991_at 1419992_x_at 1419993_at 1425133_s_at 1428391_at 1456442_at | 15573 | -0.234 | -0.0346 | No | ||
132 | FGF14 | 1435747_at 1447221_x_at 1447480_at 1449958_a_at 1458830_at 1459073_x_at | 15849 | -0.291 | -0.0464 | No | ||
133 | SYNCRIP | 1422768_at 1422769_at 1426402_at 1428546_at 1450743_s_at | 16053 | -0.337 | -0.0547 | No | ||
134 | UBE2B | 1423106_at 1423107_at 1430177_at 1439477_at 1460132_at | 16085 | -0.344 | -0.0551 | No | ||
135 | SMAD2 | 1420634_a_at 1458304_at | 16177 | -0.365 | -0.0582 | No | ||
136 | GPC3 | 1443240_at 1446525_at 1450990_at | 16474 | -0.439 | -0.0704 | No | ||
137 | GPS1 | 1415699_a_at | 16522 | -0.449 | -0.0712 | No | ||
138 | POGK | 1447864_s_at 1459896_at | 16967 | -0.584 | -0.0899 | No | ||
139 | CBX5 | 1421932_at 1421933_at 1421934_at 1450416_at 1454636_at 1459845_at | 17080 | -0.619 | -0.0931 | No | ||
140 | GPM6B | 1423091_a_at 1425942_a_at 1453514_at | 17102 | -0.625 | -0.0922 | No | ||
141 | EIF4E | 1450909_at 1457489_at 1459371_at | 17356 | -0.717 | -0.1017 | No | ||
142 | QTRTD1 | 1421320_a_at 1451199_at | 17368 | -0.725 | -0.1000 | No | ||
143 | STXBP2 | 1416449_x_at 1437048_x_at 1448341_a_at | 17405 | -0.739 | -0.0994 | No | ||
144 | MYCL1 | 1422087_at 1422088_at 1434777_at | 17534 | -0.791 | -0.1029 | No | ||
145 | ARL3 | 1450706_a_at | 17754 | -0.883 | -0.1102 | No | ||
146 | CHD4 | 1436343_at 1438476_a_at 1451295_a_at | 17819 | -0.912 | -0.1104 | No | ||
147 | ASXL1 | 1434561_at 1435077_at 1458380_at | 17889 | -0.943 | -0.1107 | No | ||
148 | USP34 | 1434392_at 1434393_at 1444437_at 1446112_at 1460126_at | 17953 | -0.964 | -0.1107 | No | ||
149 | FOXO3A | 1434831_a_at 1434832_at 1439598_at 1444226_at 1450236_at 1458279_at | 18027 | -0.992 | -0.1110 | No | ||
150 | ATF7IP | 1446323_at 1449192_at 1454973_at 1459096_at | 18160 | -1.027 | -0.1140 | No | ||
151 | TCOF1 | 1423600_a_at 1423601_s_at 1424643_at | 18195 | -1.037 | -0.1124 | No | ||
152 | SFRS14 | 1435798_a_at 1435799_at 1436005_at | 18306 | -1.082 | -0.1142 | No | ||
153 | LZTS2 | 1426409_at | 18353 | -1.100 | -0.1130 | No | ||
154 | PER1 | 1449851_at | 18601 | -1.214 | -0.1206 | No | ||
155 | PAICS | 1423564_a_at 1423565_at 1436298_x_at | 18656 | -1.238 | -0.1193 | No | ||
156 | CRMP1 | 1448289_at | 18752 | -1.289 | -0.1198 | No | ||
157 | PFN1 | 1449018_at | 18754 | -1.291 | -0.1159 | No | ||
158 | H3F3A | 1423263_at 1442087_at | 18876 | -1.361 | -0.1174 | No | ||
159 | ESRRA | 1442864_at 1460652_at | 18992 | -1.427 | -0.1183 | No | ||
160 | IPO7 | 1442511_at 1454955_at 1458165_at | 19024 | -1.446 | -0.1153 | No | ||
161 | AMPD2 | 1426757_at 1438941_x_at | 19038 | -1.456 | -0.1115 | No | ||
162 | FKBP10 | 1415951_at 1449632_s_at | 19288 | -1.618 | -0.1181 | No | ||
163 | MNT | 1418192_at | 19289 | -1.619 | -0.1131 | No | ||
164 | BTBD5 | 1428721_at 1453987_at | 19319 | -1.642 | -0.1095 | No | ||
165 | MXD4 | 1422574_at 1434378_a_at 1434379_at | 19498 | -1.772 | -0.1123 | No | ||
166 | NRAS | 1422688_a_at 1454060_a_at | 19506 | -1.778 | -0.1072 | No | ||
167 | HOXA3 | 1427433_s_at 1441070_at 1452421_at | 19602 | -1.876 | -0.1059 | No | ||
168 | TESK2 | 1426546_at | 19623 | -1.892 | -0.1011 | No | ||
169 | KCNN4 | 1421038_a_at 1435945_a_at | 19655 | -1.917 | -0.0967 | No | ||
170 | PA2G4 | 1420142_s_at 1423060_at 1435372_a_at 1450854_at 1460265_at | 19726 | -1.974 | -0.0939 | No | ||
171 | TOP1 | 1423474_at 1438495_at 1457573_at 1459672_at | 19804 | -2.024 | -0.0913 | No | ||
172 | UBE1 | 1442767_s_at 1448116_at | 20050 | -2.219 | -0.0958 | No | ||
173 | ARMET | 1428112_at 1459455_at | 20472 | -2.689 | -0.1070 | No | ||
174 | WDR23 | 1448418_s_at 1460189_at | 20482 | -2.703 | -0.0992 | No | ||
175 | ZHX2 | 1455210_at | 20896 | -3.382 | -0.1079 | No | ||
176 | SLC43A1 | 1440007_at 1453255_at | 21129 | -3.865 | -0.1069 | No | ||
177 | JMJD1A | 1426810_at | 21153 | -3.908 | -0.0960 | No | ||
178 | RFX5 | 1423103_at | 21322 | -4.463 | -0.0902 | No | ||
179 | TUBA1 | 1418884_x_at | 21444 | -4.879 | -0.0810 | No | ||
180 | CSK | 1423518_at 1439744_at | 21538 | -5.342 | -0.0690 | No | ||
181 | ISGF3G | 1421322_a_at | 21588 | -5.690 | -0.0540 | No | ||
182 | DIRC2 | 1454654_at 1457245_at | 21764 | -7.152 | -0.0403 | No | ||
183 | RORC | 1425792_a_at 1425793_a_at | 21785 | -7.272 | -0.0192 | No | ||
184 | PABPC1 | 1418883_a_at 1419500_at 1453840_at | 21934 | -8.586 | 0.0001 | No |