Dataset | Set_01_ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus_repos |
Phenotype | phenotype_ATM_minus_versus_ATM_plus.cls#ATM_minus_versus_ATM_plus_repos |
Upregulated in class | ATM_minus |
GeneSet | V$E2F_Q6 |
Enrichment Score (ES) | 0.3848922 |
Normalized Enrichment Score (NES) | 1.5389274 |
Nominal p-value | 0.0 |
FDR q-value | 0.07250331 |
FWER p-Value | 0.733 |
PROBE | DESCRIPTION (from dataset) | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
---|---|---|---|---|---|---|---|---|
1 | CDCA7 | 1428069_at 1445681_at | 17 | 9.326 | 0.0285 | Yes | ||
2 | NOLC1 | 1428869_at 1428870_at 1450087_a_at | 33 | 9.043 | 0.0561 | Yes | ||
3 | POLA2 | 1425794_at 1448369_at 1456713_at | 39 | 8.968 | 0.0840 | Yes | ||
4 | MCM6 | 1416251_at 1438852_x_at 1447756_x_at | 213 | 5.833 | 0.0944 | Yes | ||
5 | MCM4 | 1416214_at 1436708_x_at | 225 | 5.728 | 0.1118 | Yes | ||
6 | NASP | 1416042_s_at 1416043_at 1440328_at 1442728_at | 307 | 5.145 | 0.1242 | Yes | ||
7 | SNRPD1 | 1416336_s_at | 311 | 5.135 | 0.1402 | Yes | ||
8 | ATF5 | 1425927_a_at | 327 | 5.060 | 0.1554 | Yes | ||
9 | HNRPA1 | 1423531_a_at 1430020_x_at 1436549_a_at 1442758_at 1446038_at 1455305_x_at 1455740_at | 358 | 4.955 | 0.1695 | Yes | ||
10 | UNG | 1425753_a_at | 393 | 4.771 | 0.1829 | Yes | ||
11 | GMNN | 1417506_at | 412 | 4.710 | 0.1969 | Yes | ||
12 | RANBP1 | 1422547_at | 415 | 4.703 | 0.2115 | Yes | ||
13 | CDC6 | 1417019_a_at | 461 | 4.496 | 0.2236 | Yes | ||
14 | PRPS1 | 1416052_at | 485 | 4.410 | 0.2363 | Yes | ||
15 | RQCD1 | 1450887_at | 727 | 3.714 | 0.2369 | Yes | ||
16 | PHF5A | 1424170_at | 748 | 3.664 | 0.2475 | Yes | ||
17 | RAD51 | 1418281_at | 836 | 3.487 | 0.2544 | Yes | ||
18 | EZH2 | 1416544_at 1444263_at | 932 | 3.290 | 0.2604 | Yes | ||
19 | CLSPN | 1441984_at 1456280_at | 979 | 3.211 | 0.2683 | Yes | ||
20 | E2F3 | 1427462_at 1434564_at | 989 | 3.187 | 0.2779 | Yes | ||
21 | POLD1 | 1448187_at 1456055_x_at | 1064 | 3.085 | 0.2842 | Yes | ||
22 | DNAJC9 | 1426473_at | 1079 | 3.052 | 0.2931 | Yes | ||
23 | AK2 | 1448450_at 1448451_at | 1145 | 2.961 | 0.2994 | Yes | ||
24 | MRPL40 | 1448849_at | 1162 | 2.949 | 0.3079 | Yes | ||
25 | POLE2 | 1427094_at 1431440_at | 1207 | 2.896 | 0.3150 | Yes | ||
26 | CDT1 | 1424143_a_at 1424144_at 1455791_at | 1225 | 2.881 | 0.3232 | Yes | ||
27 | WEE1 | 1416773_at 1416774_at | 1261 | 2.836 | 0.3305 | Yes | ||
28 | UXT | 1418986_a_at | 1318 | 2.775 | 0.3366 | Yes | ||
29 | UFD1L | 1418087_at 1432367_a_at | 1406 | 2.687 | 0.3411 | Yes | ||
30 | POLE4 | 1423371_at 1423372_at 1432286_at 1444739_at | 1592 | 2.489 | 0.3404 | Yes | ||
31 | MCM7 | 1416030_a_at 1416031_s_at 1438320_s_at | 1610 | 2.476 | 0.3474 | Yes | ||
32 | KPNB1 | 1416925_at 1434357_a_at 1448526_at 1451967_x_at | 1733 | 2.357 | 0.3492 | Yes | ||
33 | SLC9A5 | 1420070_a_at 1455760_at | 1776 | 2.324 | 0.3545 | Yes | ||
34 | PCNA | 1417947_at | 1885 | 2.232 | 0.3566 | Yes | ||
35 | MCM8 | 1429557_at | 2034 | 2.124 | 0.3564 | Yes | ||
36 | NELL2 | 1423560_at 1423561_at | 2135 | 2.050 | 0.3583 | Yes | ||
37 | POLD3 | 1426838_at 1426839_at 1443733_x_at 1459647_at | 2280 | 1.965 | 0.3578 | Yes | ||
38 | MCM2 | 1434079_s_at 1448777_at | 2322 | 1.939 | 0.3620 | Yes | ||
39 | ING3 | 1422805_a_at 1422806_x_at 1450760_a_at 1460082_at | 2337 | 1.930 | 0.3674 | Yes | ||
40 | E2F1 | 1417878_at 1431875_a_at 1447840_x_at | 2542 | 1.816 | 0.3637 | Yes | ||
41 | NCL | 1415771_at 1415772_at 1415773_at 1442404_at 1456528_x_at | 2565 | 1.803 | 0.3684 | Yes | ||
42 | HIRA | 1436241_s_at 1450049_a_at 1450050_at 1459103_at | 2681 | 1.757 | 0.3686 | Yes | ||
43 | RBL1 | 1424156_at 1425166_at 1432604_at 1454293_at | 2810 | 1.712 | 0.3681 | Yes | ||
44 | SFRS10 | 1419543_a_at 1427432_a_at 1441466_at 1446496_at | 2886 | 1.687 | 0.3699 | Yes | ||
45 | PB1 | 1426877_a_at 1426878_at 1427266_at 1442603_at | 2913 | 1.677 | 0.3740 | Yes | ||
46 | SFRS2 | 1415807_s_at 1427504_s_at 1427816_at 1452439_s_at | 3110 | 1.602 | 0.3700 | Yes | ||
47 | MSH2 | 1416988_at 1447888_x_at | 3123 | 1.597 | 0.3745 | Yes | ||
48 | HS6ST3 | 1421599_at | 3241 | 1.556 | 0.3740 | Yes | ||
49 | AP4M1 | 1418846_at | 3344 | 1.528 | 0.3741 | Yes | ||
50 | HTF9C | 1434244_x_at 1441920_x_at 1448114_a_at 1448115_at 1453995_a_at 1457620_at | 3356 | 1.524 | 0.3784 | Yes | ||
51 | ILF3 | 1422546_at 1436802_at 1460669_at | 3451 | 1.494 | 0.3787 | Yes | ||
52 | FANCD2 | 1430916_at 1438339_at 1439091_at 1442092_at | 3590 | 1.448 | 0.3769 | Yes | ||
53 | PCSK1 | 1421396_at | 3617 | 1.435 | 0.3802 | Yes | ||
54 | RRM2 | 1416120_at 1434437_x_at 1448226_at | 3670 | 1.417 | 0.3823 | Yes | ||
55 | DNAJC11 | 1433880_at 1433881_at 1439763_at 1446686_at 1447055_at | 3800 | 1.381 | 0.3807 | Yes | ||
56 | ARHGAP11A | 1438434_at | 3804 | 1.379 | 0.3849 | Yes | ||
57 | GPRC5B | 1424613_at 1451411_at | 3998 | 1.333 | 0.3802 | No | ||
58 | SYNGR4 | 1418875_at | 4154 | 1.297 | 0.3772 | No | ||
59 | SFRS7 | 1424033_at 1424883_s_at 1436871_at | 4378 | 1.254 | 0.3708 | No | ||
60 | PAQR4 | 1423101_at | 4516 | 1.229 | 0.3684 | No | ||
61 | STMN1 | 1415849_s_at | 4840 | 1.165 | 0.3572 | No | ||
62 | GSPT1 | 1426736_at 1426737_at 1435000_at 1446550_at 1452168_x_at 1455173_at | 4997 | 1.133 | 0.3536 | No | ||
63 | ZBTB4 | 1429722_at 1460488_at | 5299 | 1.083 | 0.3432 | No | ||
64 | SEMA5A | 1422167_at 1434776_at 1437422_at 1446772_at 1446865_at 1446910_at 1459109_at | 5306 | 1.081 | 0.3463 | No | ||
65 | HMGN2 | 1433507_a_at | 5478 | 1.051 | 0.3417 | No | ||
66 | PKMYT1 | 1418481_at 1438601_at | 5843 | 1.004 | 0.3282 | No | ||
67 | HNRPD | 1425142_a_at 1446083_at | 5909 | 0.998 | 0.3283 | No | ||
68 | JPH1 | 1421520_at 1438428_at | 6218 | 0.955 | 0.3172 | No | ||
69 | INSM1 | 1421399_at 1455865_at | 6227 | 0.954 | 0.3198 | No | ||
70 | EPHB1 | 1455188_at | 6384 | 0.929 | 0.3155 | No | ||
71 | EFNA5 | 1421796_a_at 1436866_at 1440052_at 1446383_at 1451930_at | 6416 | 0.925 | 0.3170 | No | ||
72 | SFRS12 | 1427134_at 1427135_at 1427136_s_at 1458056_at | 6732 | 0.880 | 0.3053 | No | ||
73 | POLR2A | 1422311_a_at 1426242_at 1458710_at | 7677 | 0.752 | 0.2643 | No | ||
74 | SEMA6A | 1421414_a_at 1425903_at 1436458_at | 8262 | 0.675 | 0.2396 | No | ||
75 | CORT | 1449820_at | 8399 | 0.657 | 0.2354 | No | ||
76 | GABRB3 | 1421189_at 1421190_at 1435021_at | 8493 | 0.646 | 0.2332 | No | ||
77 | PAX6 | 1419271_at 1425960_s_at 1437816_at 1452526_a_at 1456342_at | 8873 | 0.601 | 0.2177 | No | ||
78 | TREX2 | 1449367_at | 9751 | 0.499 | 0.1790 | No | ||
79 | GRIA4 | 1421351_at 1435722_at 1436772_at 1440891_at 1443285_at 1458230_at 1460097_at | 9827 | 0.490 | 0.1770 | No | ||
80 | STK35 | 1431107_at 1439802_at | 10204 | 0.448 | 0.1612 | No | ||
81 | NRP2 | 1425433_a_at 1426528_at 1435349_at 1452552_at 1456778_at 1459256_at | 10291 | 0.440 | 0.1586 | No | ||
82 | FHOD1 | 1435557_at | 10856 | 0.377 | 0.1339 | No | ||
83 | ATAD2 | 1436174_at 1443146_at 1443229_at | 11025 | 0.359 | 0.1273 | No | ||
84 | PODN | 1435180_at | 11171 | 0.343 | 0.1217 | No | ||
85 | RPS6KA5 | 1431050_at 1437625_at 1439004_at 1440343_at | 11230 | 0.336 | 0.1201 | No | ||
86 | SOAT1 | 1417695_a_at 1417696_at 1417697_at 1426818_at 1448068_at | 11377 | 0.319 | 0.1144 | No | ||
87 | HOXC10 | 1439798_at | 11465 | 0.307 | 0.1114 | No | ||
88 | CSPG2 | 1421694_a_at 1427256_at 1427257_at 1433043_at 1433044_at 1447586_at 1447887_x_at 1459767_x_at | 11475 | 0.306 | 0.1119 | No | ||
89 | SLC6A4 | 1417150_at | 11509 | 0.303 | 0.1114 | No | ||
90 | DNMT1 | 1422946_a_at 1435122_x_at 1445637_at 1447877_x_at | 11510 | 0.303 | 0.1123 | No | ||
91 | FBXO5 | 1429499_at | 11714 | 0.283 | 0.1039 | No | ||
92 | PHF15 | 1430081_at 1455345_at | 11803 | 0.271 | 0.1007 | No | ||
93 | PRPF4B | 1425497_a_at 1425498_at 1436427_at 1451732_at 1451909_a_at 1455696_a_at | 11806 | 0.271 | 0.1014 | No | ||
94 | KCNA6 | 1421568_at 1441049_at 1456954_at | 11885 | 0.263 | 0.0987 | No | ||
95 | PVRL1 | 1438111_at 1438421_at 1440131_at 1446488_at 1450819_at | 12794 | 0.165 | 0.0575 | No | ||
96 | RAVER1 | 1427110_at 1427111_s_at 1444966_at | 13088 | 0.130 | 0.0445 | No | ||
97 | YBX2 | 1420762_a_at | 13658 | 0.059 | 0.0185 | No | ||
98 | KCND2 | 1422834_at 1422835_at 1446065_at 1447764_at 1450773_at 1459288_at | 13807 | 0.039 | 0.0118 | No | ||
99 | DMD | 1417307_at 1430320_at 1446156_at 1448665_at 1457022_at | 13992 | 0.016 | 0.0034 | No | ||
100 | MYH10 | 1441057_at 1452740_at | 14004 | 0.014 | 0.0030 | No | ||
101 | RASAL2 | 1436910_at 1444671_at | 14161 | -0.007 | -0.0042 | No | ||
102 | ARHGAP6 | 1417704_a_at 1451867_x_at 1456333_a_at | 14301 | -0.029 | -0.0105 | No | ||
103 | SLC38A1 | 1415903_at 1454764_s_at | 14604 | -0.076 | -0.0241 | No | ||
104 | CTNND2 | 1422592_at 1438891_at 1443638_at 1445114_at 1447552_s_at 1456116_at | 14716 | -0.092 | -0.0289 | No | ||
105 | RHD | 1417049_at | 14804 | -0.105 | -0.0326 | No | ||
106 | TOPBP1 | 1452241_at 1458480_at | 15141 | -0.160 | -0.0475 | No | ||
107 | TYRO3 | 1425248_a_at 1425249_a_at | 15300 | -0.185 | -0.0542 | No | ||
108 | DNAJC5G | 1437814_at | 15656 | -0.250 | -0.0697 | No | ||
109 | PIM1 | 1423006_at 1435458_at | 15787 | -0.279 | -0.0748 | No | ||
110 | FMO4 | 1425799_at 1444852_at | 16265 | -0.386 | -0.0955 | No | ||
111 | MXD3 | 1422970_at 1438847_at 1448878_at | 16289 | -0.394 | -0.0953 | No | ||
112 | CASP8AP2 | 1449217_at | 16798 | -0.528 | -0.1170 | No | ||
113 | DDX17 | 1437773_x_at 1439037_at 1452155_a_at | 16963 | -0.583 | -0.1227 | No | ||
114 | CBX5 | 1421932_at 1421933_at 1421934_at 1450416_at 1454636_at 1459845_at | 17080 | -0.619 | -0.1261 | No | ||
115 | WHSC1L1 | 1442085_at 1447931_at 1455668_at 1457630_at 1457793_a_at 1457794_at 1459907_a_at | 17191 | -0.658 | -0.1291 | No | ||
116 | PPM1D | 1434142_at 1449092_at 1459069_at | 17196 | -0.659 | -0.1272 | No | ||
117 | CDC25A | 1417131_at 1417132_at 1445995_at | 17222 | -0.670 | -0.1262 | No | ||
118 | BRMS1L | 1452850_s_at 1460443_at | 17345 | -0.711 | -0.1296 | No | ||
119 | EED | 1448653_at | 17407 | -0.739 | -0.1301 | No | ||
120 | SUMO1 | 1438289_a_at 1444557_at 1451005_at 1456349_x_at | 17594 | -0.817 | -0.1361 | No | ||
121 | HCN3 | 1451023_at | 17635 | -0.833 | -0.1353 | No | ||
122 | STAG2 | 1421849_at 1450396_at | 17670 | -0.846 | -0.1342 | No | ||
123 | ACBD6 | 1452601_a_at 1453199_at | 17693 | -0.854 | -0.1325 | No | ||
124 | ADAMTS2 | 1435990_at 1455720_at 1457058_at | 17774 | -0.892 | -0.1334 | No | ||
125 | DDB2 | 1425706_a_at 1436680_s_at | 18146 | -1.023 | -0.1472 | No | ||
126 | PRKDC | 1451576_at | 18211 | -1.043 | -0.1469 | No | ||
127 | ACO2 | 1436934_s_at 1442102_at 1451002_at | 18268 | -1.064 | -0.1461 | No | ||
128 | ASXL2 | 1439063_at 1444754_at 1453295_at 1458366_at 1460597_at | 18474 | -1.157 | -0.1519 | No | ||
129 | TMPO | 1421237_at 1426020_at 1426349_s_at 1428976_at 1452036_a_at | 18495 | -1.167 | -0.1492 | No | ||
130 | IL4I1 | 1419192_at | 18576 | -1.204 | -0.1491 | No | ||
131 | CDC45L | 1416575_at 1457838_at | 18583 | -1.205 | -0.1456 | No | ||
132 | IPO7 | 1442511_at 1454955_at 1458165_at | 19024 | -1.446 | -0.1613 | No | ||
133 | STAG1 | 1421939_a_at 1421940_at 1431921_a_at 1434189_at 1435731_x_at 1445145_at 1445652_at 1450420_at | 19049 | -1.462 | -0.1578 | No | ||
134 | USP37 | 1434242_at 1438212_at | 19174 | -1.552 | -0.1586 | No | ||
135 | CCNT1 | 1419313_at 1456477_at | 19227 | -1.582 | -0.1560 | No | ||
136 | PHF13 | 1455175_at | 19317 | -1.641 | -0.1550 | No | ||
137 | HNRPUL1 | 1451984_at | 19393 | -1.699 | -0.1531 | No | ||
138 | SP3 | 1431804_a_at 1459360_at | 19471 | -1.754 | -0.1511 | No | ||
139 | PPP1R8 | 1424554_at 1435821_s_at | 19534 | -1.815 | -0.1483 | No | ||
140 | PHC1 | 1423212_at | 19605 | -1.878 | -0.1456 | No | ||
141 | TBX6 | 1449868_at | 19608 | -1.881 | -0.1398 | No | ||
142 | ZCCHC8 | 1423755_at 1441639_at | 19867 | -2.062 | -0.1452 | No | ||
143 | MAZ | 1427099_at | 19890 | -2.077 | -0.1397 | No | ||
144 | ALDH6A1 | 1448104_at | 19964 | -2.141 | -0.1363 | No | ||
145 | SLCO3A1 | 1418030_at 1434537_at 1448918_at | 20008 | -2.185 | -0.1314 | No | ||
146 | SFRS1 | 1428099_a_at 1428100_at 1430982_at 1434972_x_at 1452430_s_at 1453722_s_at 1457136_at | 20198 | -2.362 | -0.1327 | No | ||
147 | NUP62 | 1415925_a_at 1415926_at 1437612_at 1438917_x_at 1447905_x_at 1448150_at | 20265 | -2.430 | -0.1281 | No | ||
148 | DCK | 1428838_a_at 1439012_a_at 1449176_a_at | 20266 | -2.433 | -0.1205 | No | ||
149 | HNRPR | 1427129_a_at 1438807_at 1452030_a_at | 20509 | -2.740 | -0.1230 | No | ||
150 | NUP153 | 1441689_at 1441733_s_at 1452176_at | 20656 | -2.957 | -0.1205 | No | ||
151 | CTCF | 1418330_at 1449042_at | 20704 | -3.033 | -0.1131 | No | ||
152 | RAB11B | 1423448_at | 20856 | -3.296 | -0.1097 | No | ||
153 | E2F7 | 1437187_at | 20960 | -3.504 | -0.1034 | No | ||
154 | UGCGL1 | 1432318_at 1448009_at 1455839_at | 21031 | -3.660 | -0.0952 | No | ||
155 | H2AFZ | 1441370_at | 21198 | -4.032 | -0.0902 | No | ||
156 | USP52 | 1426700_a_at | 21235 | -4.128 | -0.0789 | No | ||
157 | KBTBD7 | 1428192_at 1439865_at 1452700_s_at | 21484 | -5.084 | -0.0743 | No | ||
158 | ERBB2IP | 1428011_a_at 1439079_a_at 1439080_at 1439638_at 1440573_at | 21501 | -5.169 | -0.0588 | No | ||
159 | PPP1CC | 1440594_at | 21604 | -5.797 | -0.0454 | No | ||
160 | MCM3 | 1420029_at 1426653_at | 21664 | -6.234 | -0.0285 | No | ||
161 | ARID4A | 1436191_at 1438464_at 1456420_at | 21683 | -6.386 | -0.0093 | No | ||
162 | ID3 | 1416630_at | 21719 | -6.663 | 0.0100 | No |