Dataset | Set_01_ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus_repos |
Phenotype | phenotype_ATM_minus_versus_ATM_plus.cls#ATM_minus_versus_ATM_plus_repos |
Upregulated in class | ATM_minus |
GeneSet | V$E2F4DP2_01 |
Enrichment Score (ES) | 0.38554645 |
Normalized Enrichment Score (NES) | 1.540861 |
Nominal p-value | 0.0 |
FDR q-value | 0.08907949 |
FWER p-Value | 0.73 |
PROBE | DESCRIPTION (from dataset) | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
---|---|---|---|---|---|---|---|---|
1 | CDCA7 | 1428069_at 1445681_at | 17 | 9.326 | 0.0293 | Yes | ||
2 | NOLC1 | 1428869_at 1428870_at 1450087_a_at | 33 | 9.043 | 0.0577 | Yes | ||
3 | FKBP5 | 1416125_at 1447736_at 1448231_at 1458089_at | 71 | 8.330 | 0.0828 | Yes | ||
4 | MCM6 | 1416251_at 1438852_x_at 1447756_x_at | 213 | 5.833 | 0.0951 | Yes | ||
5 | MCM4 | 1416214_at 1436708_x_at | 225 | 5.728 | 0.1131 | Yes | ||
6 | MYC | 1424942_a_at | 302 | 5.162 | 0.1262 | Yes | ||
7 | NASP | 1416042_s_at 1416043_at 1440328_at 1442728_at | 307 | 5.145 | 0.1426 | Yes | ||
8 | SNRPD1 | 1416336_s_at | 311 | 5.135 | 0.1590 | Yes | ||
9 | ATF5 | 1425927_a_at | 327 | 5.060 | 0.1746 | Yes | ||
10 | HMGA1 | 1416184_s_at | 362 | 4.933 | 0.1889 | Yes | ||
11 | UNG | 1425753_a_at | 393 | 4.771 | 0.2029 | Yes | ||
12 | GMNN | 1417506_at | 412 | 4.710 | 0.2172 | Yes | ||
13 | RANBP1 | 1422547_at | 415 | 4.703 | 0.2323 | Yes | ||
14 | CDC6 | 1417019_a_at | 461 | 4.496 | 0.2447 | Yes | ||
15 | PRPS1 | 1416052_at | 485 | 4.410 | 0.2578 | Yes | ||
16 | RQCD1 | 1450887_at | 727 | 3.714 | 0.2587 | Yes | ||
17 | PHF5A | 1424170_at | 748 | 3.664 | 0.2696 | Yes | ||
18 | EZH2 | 1416544_at 1444263_at | 932 | 3.290 | 0.2718 | Yes | ||
19 | CLSPN | 1441984_at 1456280_at | 979 | 3.211 | 0.2800 | Yes | ||
20 | E2F3 | 1427462_at 1434564_at | 989 | 3.187 | 0.2899 | Yes | ||
21 | POLD1 | 1448187_at 1456055_x_at | 1064 | 3.085 | 0.2964 | Yes | ||
22 | DNAJC9 | 1426473_at | 1079 | 3.052 | 0.3056 | Yes | ||
23 | AK2 | 1448450_at 1448451_at | 1145 | 2.961 | 0.3122 | Yes | ||
24 | MRPL40 | 1448849_at | 1162 | 2.949 | 0.3209 | Yes | ||
25 | POLE2 | 1427094_at 1431440_at | 1207 | 2.896 | 0.3282 | Yes | ||
26 | POLE4 | 1423371_at 1423372_at 1432286_at 1444739_at | 1592 | 2.489 | 0.3186 | Yes | ||
27 | MCM7 | 1416030_a_at 1416031_s_at 1438320_s_at | 1610 | 2.476 | 0.3258 | Yes | ||
28 | CDC5L | 1428092_at 1460429_at | 1630 | 2.448 | 0.3328 | Yes | ||
29 | SLC9A5 | 1420070_a_at 1455760_at | 1776 | 2.324 | 0.3336 | Yes | ||
30 | PCNA | 1417947_at | 1885 | 2.232 | 0.3359 | Yes | ||
31 | EIF4A1 | 1427058_at 1430980_a_at 1434985_a_at | 1943 | 2.186 | 0.3403 | Yes | ||
32 | MCM8 | 1429557_at | 2034 | 2.124 | 0.3430 | Yes | ||
33 | NELL2 | 1423560_at 1423561_at | 2135 | 2.050 | 0.3450 | Yes | ||
34 | POLD3 | 1426838_at 1426839_at 1443733_x_at 1459647_at | 2280 | 1.965 | 0.3447 | Yes | ||
35 | MCM2 | 1434079_s_at 1448777_at | 2322 | 1.939 | 0.3491 | Yes | ||
36 | ING3 | 1422805_a_at 1422806_x_at 1450760_a_at 1460082_at | 2337 | 1.930 | 0.3546 | Yes | ||
37 | RET | 1421359_at | 2451 | 1.866 | 0.3555 | Yes | ||
38 | E2F1 | 1417878_at 1431875_a_at 1447840_x_at | 2542 | 1.816 | 0.3572 | Yes | ||
39 | NCL | 1415771_at 1415772_at 1415773_at 1442404_at 1456528_x_at | 2565 | 1.803 | 0.3620 | Yes | ||
40 | HIRA | 1436241_s_at 1450049_a_at 1450050_at 1459103_at | 2681 | 1.757 | 0.3623 | Yes | ||
41 | RBL1 | 1424156_at 1425166_at 1432604_at 1454293_at | 2810 | 1.712 | 0.3620 | Yes | ||
42 | SFRS10 | 1419543_a_at 1427432_a_at 1441466_at 1446496_at | 2886 | 1.687 | 0.3640 | Yes | ||
43 | PB1 | 1426877_a_at 1426878_at 1427266_at 1442603_at | 2913 | 1.677 | 0.3682 | Yes | ||
44 | SUV39H1 | 1427382_a_at 1432227_at 1432236_a_at | 3081 | 1.612 | 0.3657 | Yes | ||
45 | MSH2 | 1416988_at 1447888_x_at | 3123 | 1.597 | 0.3690 | Yes | ||
46 | HS6ST3 | 1421599_at | 3241 | 1.556 | 0.3686 | Yes | ||
47 | TLE3 | 1419654_at 1419655_at 1449554_at 1458512_at | 3278 | 1.548 | 0.3719 | Yes | ||
48 | AP4M1 | 1418846_at | 3344 | 1.528 | 0.3739 | Yes | ||
49 | HTF9C | 1434244_x_at 1441920_x_at 1448114_a_at 1448115_at 1453995_a_at 1457620_at | 3356 | 1.524 | 0.3783 | Yes | ||
50 | ILF3 | 1422546_at 1436802_at 1460669_at | 3451 | 1.494 | 0.3788 | Yes | ||
51 | FANCD2 | 1430916_at 1438339_at 1439091_at 1442092_at | 3590 | 1.448 | 0.3771 | Yes | ||
52 | PCSK1 | 1421396_at | 3617 | 1.435 | 0.3805 | Yes | ||
53 | RRM2 | 1416120_at 1434437_x_at 1448226_at | 3670 | 1.417 | 0.3827 | Yes | ||
54 | RTBDN | 1451603_at 1457331_at | 3768 | 1.389 | 0.3827 | Yes | ||
55 | ARHGAP11A | 1438434_at | 3804 | 1.379 | 0.3855 | Yes | ||
56 | GPRC5B | 1424613_at 1451411_at | 3998 | 1.333 | 0.3810 | No | ||
57 | SYNGR4 | 1418875_at | 4154 | 1.297 | 0.3780 | No | ||
58 | SFRS7 | 1424033_at 1424883_s_at 1436871_at | 4378 | 1.254 | 0.3718 | No | ||
59 | SLITRK4 | 1434878_at 1437744_at | 4495 | 1.233 | 0.3705 | No | ||
60 | PAQR4 | 1423101_at | 4516 | 1.229 | 0.3735 | No | ||
61 | STMN1 | 1415849_s_at | 4840 | 1.165 | 0.3624 | No | ||
62 | MAPT | 1417885_at 1424718_at 1424719_a_at 1445634_at 1455028_at | 4966 | 1.139 | 0.3604 | No | ||
63 | GSPT1 | 1426736_at 1426737_at 1435000_at 1446550_at 1452168_x_at 1455173_at | 4997 | 1.133 | 0.3626 | No | ||
64 | HNRPA2B1 | 1420365_a_at 1433829_a_at 1433830_at 1434047_x_at | 5005 | 1.131 | 0.3659 | No | ||
65 | ZIM2 | 1432297_at | 5072 | 1.120 | 0.3665 | No | ||
66 | PTMA | 1423455_at | 5264 | 1.088 | 0.3613 | No | ||
67 | ZBTB4 | 1429722_at 1460488_at | 5299 | 1.083 | 0.3632 | No | ||
68 | MAP3K7 | 1419988_at 1425795_a_at 1426627_at 1449693_at 1455441_at 1458787_at | 5318 | 1.078 | 0.3658 | No | ||
69 | GLRA3 | 1450239_at | 5321 | 1.077 | 0.3692 | No | ||
70 | PKMYT1 | 1418481_at 1438601_at | 5843 | 1.004 | 0.3485 | No | ||
71 | HNRPD | 1425142_a_at 1446083_at | 5909 | 0.998 | 0.3487 | No | ||
72 | EPHB1 | 1455188_at | 6384 | 0.929 | 0.3300 | No | ||
73 | EFNA5 | 1421796_a_at 1436866_at 1440052_at 1446383_at 1451930_at | 6416 | 0.925 | 0.3315 | No | ||
74 | AP1S1 | 1416087_at | 6440 | 0.921 | 0.3334 | No | ||
75 | GATA1 | 1449232_at | 7007 | 0.838 | 0.3101 | No | ||
76 | KCNS2 | 1421342_at 1441211_at 1457325_at | 7508 | 0.775 | 0.2897 | No | ||
77 | POLR2A | 1422311_a_at 1426242_at 1458710_at | 7677 | 0.752 | 0.2844 | No | ||
78 | SEMA6A | 1421414_a_at 1425903_at 1436458_at | 8262 | 0.675 | 0.2597 | No | ||
79 | CORT | 1449820_at | 8399 | 0.657 | 0.2556 | No | ||
80 | GABRB3 | 1421189_at 1421190_at 1435021_at | 8493 | 0.646 | 0.2534 | No | ||
81 | CBX3 | 1432628_at 1454305_at | 8748 | 0.616 | 0.2437 | No | ||
82 | PAX6 | 1419271_at 1425960_s_at 1437816_at 1452526_a_at 1456342_at | 8873 | 0.601 | 0.2400 | No | ||
83 | GRIA4 | 1421351_at 1435722_at 1436772_at 1440891_at 1443285_at 1458230_at 1460097_at | 9827 | 0.490 | 0.1978 | No | ||
84 | STK35 | 1431107_at 1439802_at | 10204 | 0.448 | 0.1820 | No | ||
85 | POU4F1 | 1429667_at 1429668_at | 10594 | 0.409 | 0.1654 | No | ||
86 | FHOD1 | 1435557_at | 10856 | 0.377 | 0.1546 | No | ||
87 | PRPS2 | 1420637_at 1420638_at 1443418_at 1454843_at | 10984 | 0.363 | 0.1500 | No | ||
88 | ATAD2 | 1436174_at 1443146_at 1443229_at | 11025 | 0.359 | 0.1493 | No | ||
89 | PODN | 1435180_at | 11171 | 0.343 | 0.1437 | No | ||
90 | RPS6KA5 | 1431050_at 1437625_at 1439004_at 1440343_at | 11230 | 0.336 | 0.1422 | No | ||
91 | SOAT1 | 1417695_a_at 1417696_at 1417697_at 1426818_at 1448068_at | 11377 | 0.319 | 0.1365 | No | ||
92 | HOXC10 | 1439798_at | 11465 | 0.307 | 0.1335 | No | ||
93 | CSPG2 | 1421694_a_at 1427256_at 1427257_at 1433043_at 1433044_at 1447586_at 1447887_x_at 1459767_x_at | 11475 | 0.306 | 0.1340 | No | ||
94 | NRK | 1436399_s_at 1450078_at 1450079_at | 11489 | 0.304 | 0.1344 | No | ||
95 | DNMT1 | 1422946_a_at 1435122_x_at 1445637_at 1447877_x_at | 11510 | 0.303 | 0.1345 | No | ||
96 | FBXO5 | 1429499_at | 11714 | 0.283 | 0.1261 | No | ||
97 | PHF15 | 1430081_at 1455345_at | 11803 | 0.271 | 0.1229 | No | ||
98 | PRPF4B | 1425497_a_at 1425498_at 1436427_at 1451732_at 1451909_a_at 1455696_a_at | 11806 | 0.271 | 0.1237 | No | ||
99 | KCNA6 | 1421568_at 1441049_at 1456954_at | 11885 | 0.263 | 0.1210 | No | ||
100 | RPS20 | 1456373_x_at 1456436_x_at | 12185 | 0.233 | 0.1080 | No | ||
101 | FANCC | 1442265_at 1447632_at 1450861_at | 12263 | 0.226 | 0.1052 | No | ||
102 | RAVER1 | 1427110_at 1427111_s_at 1444966_at | 13088 | 0.130 | 0.0677 | No | ||
103 | YBX2 | 1420762_a_at | 13658 | 0.059 | 0.0418 | No | ||
104 | DMD | 1417307_at 1430320_at 1446156_at 1448665_at 1457022_at | 13992 | 0.016 | 0.0266 | No | ||
105 | MYH10 | 1441057_at 1452740_at | 14004 | 0.014 | 0.0261 | No | ||
106 | NR6A1 | 1421515_at 1421516_at 1428825_at 1428826_at 1445872_at | 14040 | 0.010 | 0.0245 | No | ||
107 | RASAL2 | 1436910_at 1444671_at | 14161 | -0.007 | 0.0190 | No | ||
108 | ARHGAP6 | 1417704_a_at 1451867_x_at 1456333_a_at | 14301 | -0.029 | 0.0127 | No | ||
109 | PEG3 | 1417355_at 1417356_at 1433924_at 1447731_at 1447732_x_at | 14466 | -0.052 | 0.0054 | No | ||
110 | TOPBP1 | 1452241_at 1458480_at | 15141 | -0.160 | -0.0251 | No | ||
111 | TYRO3 | 1425248_a_at 1425249_a_at | 15300 | -0.185 | -0.0317 | No | ||
112 | FANCG | 1420960_at | 15516 | -0.224 | -0.0409 | No | ||
113 | DNAJC5G | 1437814_at | 15656 | -0.250 | -0.0464 | No | ||
114 | PIM1 | 1423006_at 1435458_at | 15787 | -0.279 | -0.0515 | No | ||
115 | SYNCRIP | 1422768_at 1422769_at 1426402_at 1428546_at 1450743_s_at | 16053 | -0.337 | -0.0626 | No | ||
116 | FMO4 | 1425799_at 1444852_at | 16265 | -0.386 | -0.0710 | No | ||
117 | MXD3 | 1422970_at 1438847_at 1448878_at | 16289 | -0.394 | -0.0708 | No | ||
118 | MAPK6 | 1419168_at 1419169_at 1429963_at 1459146_at | 16676 | -0.490 | -0.0870 | No | ||
119 | PLAGL1 | 1426208_x_at 1438588_at 1450533_a_at | 16749 | -0.513 | -0.0886 | No | ||
120 | CASP8AP2 | 1449217_at | 16798 | -0.528 | -0.0891 | No | ||
121 | PPIG | 1434475_at 1435341_at 1436505_at | 16955 | -0.581 | -0.0944 | No | ||
122 | PPM1D | 1434142_at 1449092_at 1459069_at | 17196 | -0.659 | -0.1033 | No | ||
123 | CDC25A | 1417131_at 1417132_at 1445995_at | 17222 | -0.670 | -0.1023 | No | ||
124 | MSH5 | 1430771_a_at 1449537_at | 17344 | -0.711 | -0.1056 | No | ||
125 | BRMS1L | 1452850_s_at 1460443_at | 17345 | -0.711 | -0.1033 | No | ||
126 | EED | 1448653_at | 17407 | -0.739 | -0.1037 | No | ||
127 | SUMO1 | 1438289_a_at 1444557_at 1451005_at 1456349_x_at | 17594 | -0.817 | -0.1096 | No | ||
128 | HCN3 | 1451023_at | 17635 | -0.833 | -0.1088 | No | ||
129 | ACBD6 | 1452601_a_at 1453199_at | 17693 | -0.854 | -0.1087 | No | ||
130 | ADAMTS2 | 1435990_at 1455720_at 1457058_at | 17774 | -0.892 | -0.1095 | No | ||
131 | PRKDC | 1451576_at | 18211 | -1.043 | -0.1261 | No | ||
132 | ACO2 | 1436934_s_at 1442102_at 1451002_at | 18268 | -1.064 | -0.1253 | No | ||
133 | ASXL2 | 1439063_at 1444754_at 1453295_at 1458366_at 1460597_at | 18474 | -1.157 | -0.1310 | No | ||
134 | TMPO | 1421237_at 1426020_at 1426349_s_at 1428976_at 1452036_a_at | 18495 | -1.167 | -0.1281 | No | ||
135 | IL4I1 | 1419192_at | 18576 | -1.204 | -0.1279 | No | ||
136 | IPO7 | 1442511_at 1454955_at 1458165_at | 19024 | -1.446 | -0.1438 | No | ||
137 | STAG1 | 1421939_a_at 1421940_at 1431921_a_at 1434189_at 1435731_x_at 1445145_at 1445652_at 1450420_at | 19049 | -1.462 | -0.1402 | No | ||
138 | USP37 | 1434242_at 1438212_at | 19174 | -1.552 | -0.1409 | No | ||
139 | CCNT1 | 1419313_at 1456477_at | 19227 | -1.582 | -0.1382 | No | ||
140 | HNRPUL1 | 1451984_at | 19393 | -1.699 | -0.1403 | No | ||
141 | SP3 | 1431804_a_at 1459360_at | 19471 | -1.754 | -0.1382 | No | ||
142 | PHC1 | 1423212_at | 19605 | -1.878 | -0.1382 | No | ||
143 | TBX6 | 1449868_at | 19608 | -1.881 | -0.1323 | No | ||
144 | ZCCHC8 | 1423755_at 1441639_at | 19867 | -2.062 | -0.1375 | No | ||
145 | MAZ | 1427099_at | 19890 | -2.077 | -0.1318 | No | ||
146 | ALDH6A1 | 1448104_at | 19964 | -2.141 | -0.1282 | No | ||
147 | SLCO3A1 | 1418030_at 1434537_at 1448918_at | 20008 | -2.185 | -0.1232 | No | ||
148 | SFRS1 | 1428099_a_at 1428100_at 1430982_at 1434972_x_at 1452430_s_at 1453722_s_at 1457136_at | 20198 | -2.362 | -0.1243 | No | ||
149 | NUP62 | 1415925_a_at 1415926_at 1437612_at 1438917_x_at 1447905_x_at 1448150_at | 20265 | -2.430 | -0.1195 | No | ||
150 | DCK | 1428838_a_at 1439012_a_at 1449176_a_at | 20266 | -2.433 | -0.1116 | No | ||
151 | HNRPR | 1427129_a_at 1438807_at 1452030_a_at | 20509 | -2.740 | -0.1139 | No | ||
152 | BRPF1 | 1460402_at | 20791 | -3.170 | -0.1166 | No | ||
153 | E2F7 | 1437187_at | 20960 | -3.504 | -0.1130 | No | ||
154 | UGCGL1 | 1432318_at 1448009_at 1455839_at | 21031 | -3.660 | -0.1045 | No | ||
155 | H2AFZ | 1441370_at | 21198 | -4.032 | -0.0991 | No | ||
156 | TRIM39 | 1418851_at | 21234 | -4.127 | -0.0874 | No | ||
157 | USP52 | 1426700_a_at | 21235 | -4.128 | -0.0741 | No | ||
158 | KBTBD7 | 1428192_at 1439865_at 1452700_s_at | 21484 | -5.084 | -0.0692 | No | ||
159 | MCM3 | 1420029_at 1426653_at | 21664 | -6.234 | -0.0573 | No | ||
160 | ARID4A | 1436191_at 1438464_at 1456420_at | 21683 | -6.386 | -0.0376 | No | ||
161 | ID3 | 1416630_at | 21719 | -6.663 | -0.0177 | No | ||
162 | H2AFV | 1428029_a_at 1436596_at | 21933 | -8.580 | 0.0001 | No |